RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 SPATA12Q7Z6I5 190 aa4.54□□□□□ -1.68
CLTCL1-206ENST00000540896 WFDC10BQ8IUB3 73 aa4.54□□□□□ -1.68
CLTCL1-206ENST00000540896 MRPS16Q9Y3D3 137 aaKnown RBP4.54□□□□□ -1.68
CLTCL1-206ENST00000540896 LINC00588Q9Y4M8 146 aa4.54□□□□□ -1.68
CLTCL1-206ENST00000540896 DYNC2H1Q8NCM8 4307 aaKnown RBP4.54□□□□□ -1.68
CLTCL1-206ENST00000540896 KMT2CQ8NEZ4 4911 aaKnown RBP4.53□□□□□ -1.68
CLTCL1-206ENST00000540896 TRAV9-2A0A087WT02 112 aa4.53□□□□□ -1.68
CLTCL1-206ENST00000540896 TRAV13-1A0A0B4J241 112 aa4.53□□□□□ -1.68
CLTCL1-206ENST00000540896 F8VRH5 84 aa4.53□□□□□ -1.68
CLTCL1-206ENST00000540896 SIVA1O15304 175 aa4.53□□□□□ -1.68
CLTCL1-206ENST00000540896 DPM2O94777 84 aa4.53□□□□□ -1.68
CLTCL1-206ENST00000540896 PYY3Q5JQD4 70 aa4.53□□□□□ -1.68
CLTCL1-206ENST00000540896 LINC01545Q5VT33 79 aa4.53□□□□□ -1.68
CLTCL1-206ENST00000540896 LGALS9CQ6DKI2 356 aa4.53□□□□□ -1.68
CLTCL1-206ENST00000540896 CLPSL2Q6UWE3 100 aa4.53□□□□□ -1.68
CLTCL1-206ENST00000540896 ATOH7Q8N100 152 aa4.53□□□□□ -1.68
CLTCL1-206ENST00000540896 LINC00269Q8N2A0 174 aa4.53□□□□□ -1.68
CLTCL1-206ENST00000540896 GEMIN7Q9H840 131 aaKnown RBP4.53□□□□□ -1.68
CLTCL1-206ENST00000540896 MRPL35Q9NZE8 188 aaKnown RBP4.53□□□□□ -1.68
CLTCL1-206ENST00000540896 KLK12Q9UKR0 248 aa4.53□□□□□ -1.68
CLTCL1-206ENST00000540896 STARD9Q9P2P6 4700 aa4.53□□□□□ -1.68
CLTCL1-206ENST00000540896 HSBP1L1C9JCN9 74 aa4.52□□□□□ -1.69
CLTCL1-206ENST00000540896 IGKCP01834 107 aa4.52□□□□□ -1.69
CLTCL1-206ENST00000540896 CRPP02741 224 aa4.52□□□□□ -1.69
CLTCL1-206ENST00000540896 PLNP26678 52 aa4.52□□□□□ -1.69
CLTCL1-206ENST00000540896 S100A12P80511 92 aa4.52□□□□□ -1.69
CLTCL1-206ENST00000540896 REG3AQ06141 175 aa4.52□□□□□ -1.69
CLTCL1-206ENST00000540896 SS18Q15532 418 aa4.52□□□□□ -1.69
CLTCL1-206ENST00000540896 UBE2WQ96B02 151 aa4.52□□□□□ -1.69
CLTCL1-206ENST00000540896 AMELXQ99217 191 aa4.52□□□□□ -1.69
CLTCL1-206ENST00000540896 A0A0J9YXV3 536 aa4.51□□□□□ -1.69
CLTCL1-206ENST00000540896 LINC00959A0A1B0GUT2 108 aa4.51□□□□□ -1.69
CLTCL1-206ENST00000540896 DNAH10OSP0CZ25 163 aa4.51□□□□□ -1.69
CLTCL1-206ENST00000540896 SMIM6P0DI80 62 aa4.51□□□□□ -1.69
CLTCL1-206ENST00000540896 UBE2D1P51668 147 aa4.51□□□□□ -1.69
CLTCL1-206ENST00000540896 SEC11AP67812 179 aa4.51□□□□□ -1.69
CLTCL1-206ENST00000540896 LINC01556Q5JQF7 62 aa4.51□□□□□ -1.69
CLTCL1-206ENST00000540896 TMEM170BQ5T4T1 132 aa4.51□□□□□ -1.69
CLTCL1-206ENST00000540896 FAM104AQ969W3 186 aa4.51□□□□□ -1.69
CLTCL1-206ENST00000540896 CHAC1Q9BUX1 264 aa4.51□□□□□ -1.69
CLTCL1-206ENST00000540896 Q9H8V8 135 aa4.51□□□□□ -1.69
CLTCL1-206ENST00000540896 IGLV10-54A0A075B6I4 117 aa4.5□□□□□ -1.69
CLTCL1-206ENST00000540896 TINCRA0A1B0GVN0 87 aa4.5□□□□□ -1.69
CLTCL1-206ENST00000540896 H3BRM9 83 aa4.5□□□□□ -1.69
CLTCL1-206ENST00000540896 IGLC3P0DOY3 106 aa4.5□□□□□ -1.69
CLTCL1-206ENST00000540896 XCL1P47992 114 aa4.5□□□□□ -1.69
CLTCL1-206ENST00000540896 HERVK_113P63121 156 aa4.5□□□□□ -1.69
CLTCL1-206ENST00000540896 KRTAP15-1Q3LI76 137 aa4.5□□□□□ -1.69
CLTCL1-206ENST00000540896 LINC00469Q8N7U9 141 aa4.5□□□□□ -1.69
CLTCL1-206ENST00000540896 C12orf57Q99622 126 aa4.5□□□□□ -1.69
CLTCL1-206ENST00000540896 LYSTQ99698 3801 aa4.5□□□□□ -1.69
CLTCL1-206ENST00000540896 UPK3BQ9BT76 320 aa4.5□□□□□ -1.69
CLTCL1-206ENST00000540896 VAMP8Q9BV40 100 aa4.5□□□□□ -1.69
CLTCL1-206ENST00000540896 PLECQ15149 4684 aaKnown RBP4.5□□□□□ -1.69
CLTCL1-206ENST00000540896 IGLV4-69A0A075B6H9 119 aa4.49□□□□□ -1.69
CLTCL1-206ENST00000540896 TRAV8-3A0A0A6YYJ7 113 aa4.49□□□□□ -1.69
CLTCL1-206ENST00000540896 hDV102S1A0JD36 115 aa4.49□□□□□ -1.69
CLTCL1-206ENST00000540896 C11orf86A6NJI1 115 aa4.49□□□□□ -1.69
CLTCL1-206ENST00000540896 CCL25O15444 150 aa4.49□□□□□ -1.69
CLTCL1-206ENST00000540896 HERVK_113P61574 105 aa4.49□□□□□ -1.69
CLTCL1-206ENST00000540896 MIAQ16674 131 aa4.49□□□□□ -1.69
CLTCL1-206ENST00000540896 LINC00242Q5T6M2 205 aa4.49□□□□□ -1.69
CLTCL1-206ENST00000540896 NFE4Q86UQ8 179 aa4.49□□□□□ -1.69
CLTCL1-206ENST00000540896 C10orf126Q8N4M7 172 aa4.49□□□□□ -1.69
CLTCL1-206ENST00000540896 STPG4Q8N801 248 aa4.49□□□□□ -1.69
CLTCL1-206ENST00000540896 CHCHD10Q8WYQ3 142 aaPredicted RBP4.49□□□□□ -1.69
CLTCL1-206ENST00000540896 C1orf43Q9BWL3 253 aa4.49□□□□□ -1.69
CLTCL1-206ENST00000540896 Q9HAA7 133 aa4.49□□□□□ -1.69
CLTCL1-206ENST00000540896 PAM16Q9Y3D7 125 aa4.49□□□□□ -1.69
CLTCL1-206ENST00000540896 IGKV2D-24A0A075B6R9 120 aa4.48□□□□□ -1.69
CLTCL1-206ENST00000540896 TRAV8-4A0A0B4J246 113 aa4.48□□□□□ -1.69
CLTCL1-206ENST00000540896 COX6A2Q02221 97 aa4.48□□□□□ -1.69
CLTCL1-206ENST00000540896 MAJINQ3KP22 176 aa4.48□□□□□ -1.69
CLTCL1-206ENST00000540896 SPATA45Q537H7 98 aa4.48□□□□□ -1.69
CLTCL1-206ENST00000540896 ENHOQ6UWT2 76 aa4.48□□□□□ -1.69
CLTCL1-206ENST00000540896 LINC00518Q8N0U6 118 aa4.48□□□□□ -1.69
CLTCL1-206ENST00000540896 RMI2Q96E14 147 aa4.48□□□□□ -1.69
CLTCL1-206ENST00000540896 PRR34Q9NV39 138 aa4.48□□□□□ -1.69
CLTCL1-206ENST00000540896 CDKN2A-AS1Q9UH64 79 aa4.48□□□□□ -1.69
CLTCL1-206ENST00000540896 RYR3Q15413 4870 aa4.48□□□□□ -1.69
CLTCL1-206ENST00000540896 IGHV3-64A0A075B6Q5 118 aa4.47□□□□□ -1.69
CLTCL1-206ENST00000540896 GAGE12HA6NDE8 117 aa4.47□□□□□ -1.69
CLTCL1-206ENST00000540896 IBA57-AS1B1ANH7 110 aa4.47□□□□□ -1.69
CLTCL1-206ENST00000540896 K7EP13 123 aa4.47□□□□□ -1.69
CLTCL1-206ENST00000540896 LY6G6CO95867 125 aa4.47□□□□□ -1.69
CLTCL1-206ENST00000540896 SPINK8P0C7L1 97 aa4.47□□□□□ -1.69
CLTCL1-206ENST00000540896 ZNF22P17026 224 aaPredicted RBP4.47□□□□□ -1.69
CLTCL1-206ENST00000540896 NMUP48645 174 aa4.47□□□□□ -1.69
CLTCL1-206ENST00000540896 TTC32Q5I0X7 151 aa4.47□□□□□ -1.69
CLTCL1-206ENST00000540896 CD164L2Q6UWJ8 174 aa4.47□□□□□ -1.69
CLTCL1-206ENST00000540896 FAM19A3Q7Z5A8 133 aa4.47□□□□□ -1.69
CLTCL1-206ENST00000540896 C5orf38Q86SI9 138 aa4.47□□□□□ -1.69
CLTCL1-206ENST00000540896 IGHV3OR16-9A0A0B4J2B5 98 aa4.46□□□□□ -1.7
CLTCL1-206ENST00000540896 LCE6AA0A183 80 aa4.46□□□□□ -1.7
CLTCL1-206ENST00000540896 COX7A2LO14548 114 aa4.46□□□□□ -1.7
CLTCL1-206ENST00000540896 LINC00476Q8WZB0 136 aa4.46□□□□□ -1.7
CLTCL1-206ENST00000540896 ALMS1Q8TCU4 4167 aa4.45□□□□□ -1.7
CLTCL1-206ENST00000540896 IGLV5-45A0A087WSX0 123 aa4.45□□□□□ -1.7
CLTCL1-206ENST00000540896 A0A087WZ39 114 aa4.45□□□□□ -1.7
CLTCL1-206ENST00000540896 NBDYA0A0U1RRE5 68 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms