RNA–Protein interactions for RNA: ENST00000540781.5

RAP1B-222, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-222	ENST00000540781	PYGO1	Q9Y3Y4	419 aa		12.61	□□□□□ -0.39
RAP1B-222	ENST00000540781	HERC1	Q15751	4861 aa		12.6	□□□□□ -0.39
RAP1B-222	ENST00000540781	TRAV9-1	A0A075B6T8	112 aa		12.59	□□□□□ -0.39
RAP1B-222	ENST00000540781		Q6ZRU5	148 aa		12.59	□□□□□ -0.39
RAP1B-222	ENST00000540781	CAMK2N2	Q96S95	79 aa		12.59	□□□□□ -0.39
RAP1B-222	ENST00000540781	IGLV4-3	A0A075B6K6	122 aa		12.58	□□□□□ -0.4
RAP1B-222	ENST00000540781	KRTAP29-1	A8MX34	341 aa	Predicted RBP	12.58	□□□□□ -0.4
RAP1B-222	ENST00000540781	STPG4	Q8N801	248 aa		12.58	□□□□□ -0.4
RAP1B-222	ENST00000540781	C2orf48	Q96LS8	159 aa		12.58	□□□□□ -0.4
RAP1B-222	ENST00000540781	IGHV3OR16-9	A0A0B4J2B5	98 aa		12.57	□□□□□ -0.4
RAP1B-222	ENST00000540781	S100P	P25815	95 aa		12.57	□□□□□ -0.4
RAP1B-222	ENST00000540781	SPAG11B	Q08648	103 aa		12.57	□□□□□ -0.4
RAP1B-222	ENST00000540781	ORMDL2	Q53FV1	153 aa		12.57	□□□□□ -0.4
RAP1B-222	ENST00000540781	C2orf66	Q6UXQ4	117 aa		12.57	□□□□□ -0.4
RAP1B-222	ENST00000540781	TMEM141	Q96I45	108 aa		12.57	□□□□□ -0.4
RAP1B-222	ENST00000540781	LINC00474	Q9P2X8	69 aa		12.57	□□□□□ -0.4
RAP1B-222	ENST00000540781	CYSLTR1	Q9Y271	337 aa		12.57	□□□□□ -0.4
RAP1B-222	ENST00000540781	KIAA1644	Q3SXP7	199 aa		12.56	□□□□□ -0.4
RAP1B-222	ENST00000540781	OR10D4P	Q8NGN7	298 aa		12.56	□□□□□ -0.4
RAP1B-222	ENST00000540781	C7orf33	Q8WU49	177 aa		12.56	□□□□□ -0.4
RAP1B-222	ENST00000540781	NXT2	Q9NPJ8	142 aa	Known RBP	12.56	□□□□□ -0.4
RAP1B-222	ENST00000540781	LOC107984640	A0A0U1RRK4	108 aa		12.55	□□□□□ -0.4
RAP1B-222	ENST00000540781		K7EMI3	77 aa		12.55	□□□□□ -0.4
RAP1B-222	ENST00000540781	HNRNPA3	P51991	378 aa	Known RBP	12.55	□□□□□ -0.4
RAP1B-222	ENST00000540781	ORAOV1	Q8WV07	137 aa		12.55	□□□□□ -0.4
RAP1B-222	ENST00000540781	TGIF2-C20orf24	A0A0A6YYL0	155 aa		12.54	□□□□□ -0.4
RAP1B-222	ENST00000540781	TEX43	Q6ZNM6	134 aa		12.54	□□□□□ -0.4
RAP1B-222	ENST00000540781	GAGE2B	Q13066	116 aa		12.53	□□□□□ -0.4
RAP1B-222	ENST00000540781	C10orf91	Q5T1B1	145 aa		12.53	□□□□□ -0.4
RAP1B-222	ENST00000540781	OXT	P01178	125 aa		12.52	□□□□□ -0.41
RAP1B-222	ENST00000540781	PTTG1IP	P53801	180 aa		12.52	□□□□□ -0.41
RAP1B-222	ENST00000540781	LINC00242	Q5T6M2	205 aa		12.52	□□□□□ -0.41
RAP1B-222	ENST00000540781		Q6ZN92	141 aa		12.52	□□□□□ -0.41
RAP1B-222	ENST00000540781	C2orf88	Q9BSF0	95 aa		12.52	□□□□□ -0.41
RAP1B-222	ENST00000540781	PKHD1L1	Q86WI1	4243 aa		12.51	□□□□□ -0.41
RAP1B-222	ENST00000540781	GNB1L	Q9BYB4	327 aa		12.51	□□□□□ -0.41
RAP1B-222	ENST00000540781	VCX2	Q9H322	139 aa		12.51	□□□□□ -0.41
RAP1B-222	ENST00000540781	CARHSP1	Q9Y2V2	147 aa	Known RBP	12.51	□□□□□ -0.41
RAP1B-222	ENST00000540781		F8WDY8	70 aa		12.5	□□□□□ -0.41
RAP1B-222	ENST00000540781	G0S2	P27469	103 aa		12.5	□□□□□ -0.41
RAP1B-222	ENST00000540781	UBE2D1	P51668	147 aa		12.5	□□□□□ -0.41
RAP1B-222	ENST00000540781	RHEB	Q15382	184 aa		12.5	□□□□□ -0.41
RAP1B-222	ENST00000540781	RNF151	Q2KHN1	245 aa		12.5	□□□□□ -0.41
RAP1B-222	ENST00000540781	COX19	Q49B96	90 aa		12.5	□□□□□ -0.41
RAP1B-222	ENST00000540781	ZC2HC1B	Q5TFG8	222 aa		12.5	□□□□□ -0.41
RAP1B-222	ENST00000540781	RPS10P5	Q9NQ39	176 aa		12.5	□□□□□ -0.41
RAP1B-222	ENST00000540781		A0A087WZ39	114 aa		12.49	□□□□□ -0.41
RAP1B-222	ENST00000540781		A0A0J9YXV3	536 aa		12.49	□□□□□ -0.41
RAP1B-222	ENST00000540781	IGIP	A6NJ69	53 aa		12.49	□□□□□ -0.41
RAP1B-222	ENST00000540781	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	12.49	□□□□□ -0.41
RAP1B-222	ENST00000540781	NPS	P0C0P6	89 aa		12.49	□□□□□ -0.41
RAP1B-222	ENST00000540781	AMELX	Q99217	191 aa		12.49	□□□□□ -0.41
RAP1B-222	ENST00000540781	NDUFA1	O15239	70 aa		12.48	□□□□□ -0.41
RAP1B-222	ENST00000540781	LINC00173	Q6ZV60	143 aa		12.48	□□□□□ -0.41
RAP1B-222	ENST00000540781	MRPL35	Q9NZE8	188 aa	Known RBP	12.48	□□□□□ -0.41
RAP1B-222	ENST00000540781	LRP1	Q07954	4544 aa	Known RBP	12.47	□□□□□ -0.41
RAP1B-222	ENST00000540781	RPL18A	Q02543	176 aa	Known RBP	12.47	□□□□□ -0.41
RAP1B-222	ENST00000540781	ALKBH7	Q9BT30	221 aa	Predicted RBP	12.47	□□□□□ -0.41
RAP1B-222	ENST00000540781	MT-ND6	P03923	174 aa		12.46	□□□□□ -0.41
RAP1B-222	ENST00000540781	PAPPA-AS1	Q5QFB9	102 aa		12.46	□□□□□ -0.41
RAP1B-222	ENST00000540781	TOMM6	Q96B49	74 aa		12.46	□□□□□ -0.41
RAP1B-222	ENST00000540781	FABP9	Q0Z7S8	132 aa		12.45	□□□□□ -0.42
RAP1B-222	ENST00000540781	C10orf25	Q5T742	122 aa		12.45	□□□□□ -0.42
RAP1B-222	ENST00000540781	UNQ6190/PRO20217	Q6UXQ8	127 aa		12.45	□□□□□ -0.42
RAP1B-222	ENST00000540781	TIMM17A	Q99595	171 aa		12.45	□□□□□ -0.42
RAP1B-222	ENST00000540781	MRPL18	Q9H0U6	180 aa	Known RBP	12.45	□□□□□ -0.42
RAP1B-222	ENST00000540781	FAT3	Q8TDW7	4589 aa		12.45	□□□□□ -0.42
RAP1B-222	ENST00000540781	KIAA0087	Q14695	138 aa		12.44	□□□□□ -0.42
RAP1B-222	ENST00000540781	LINC01561	Q8N1V8	128 aa		12.44	□□□□□ -0.42
RAP1B-222	ENST00000540781		A0A1W2PNN7	141 aa		12.43	□□□□□ -0.42
RAP1B-222	ENST00000540781	PRR3	P79522	188 aa	Known RBP	12.43	□□□□□ -0.42
RAP1B-222	ENST00000540781	SCGB3A1	Q96QR1	104 aa		12.43	□□□□□ -0.42
RAP1B-222	ENST00000540781	C6orf48	Q9UBA6	75 aa		12.43	□□□□□ -0.42
RAP1B-222	ENST00000540781	APOC3	P02656	99 aa		12.42	□□□□□ -0.42
RAP1B-222	ENST00000540781	ERAS	Q7Z444	233 aa		12.42	□□□□□ -0.42
RAP1B-222	ENST00000540781	FAM19A3	Q7Z5A8	133 aa		12.42	□□□□□ -0.42
RAP1B-222	ENST00000540781	SEC11A	P67812	179 aa		12.41	□□□□□ -0.42
RAP1B-222	ENST00000540781	C9orf116	Q5BN46	136 aa	Predicted RBP	12.41	□□□□□ -0.42
RAP1B-222	ENST00000540781	LINC01546	A6NGU7	62 aa		12.4	□□□□□ -0.42
RAP1B-222	ENST00000540781	FA2H	Q7L5A8	372 aa		12.4	□□□□□ -0.42
RAP1B-222	ENST00000540781	LINC01549	A6NIU2	74 aa		12.39	□□□□□ -0.43
RAP1B-222	ENST00000540781	TLX1NB	P0CAT3	122 aa		12.39	□□□□□ -0.43
RAP1B-222	ENST00000540781	HERVK_113	P63121	156 aa		12.39	□□□□□ -0.43
RAP1B-222	ENST00000540781	NDUFA5	Q16718	116 aa		12.39	□□□□□ -0.43
RAP1B-222	ENST00000540781	C2orf82	Q6UX34	121 aa		12.39	□□□□□ -0.43
RAP1B-222	ENST00000540781	GEMIN7	Q9H840	131 aa	Known RBP	12.39	□□□□□ -0.43
RAP1B-222	ENST00000540781	SMCO4	Q9NRQ5	59 aa		12.39	□□□□□ -0.43
RAP1B-222	ENST00000540781	PRSS2	P07478	247 aa		12.38	□□□□□ -0.43
RAP1B-222	ENST00000540781		Q6ZRP5	223 aa		12.38	□□□□□ -0.43
RAP1B-222	ENST00000540781	PACRG	Q96M98	296 aa	Predicted RBP	12.38	□□□□□ -0.43
RAP1B-222	ENST00000540781	TOMM7	Q9P0U1	55 aa		12.38	□□□□□ -0.43
RAP1B-222	ENST00000540781	TRBV30	A0A0K0K1B3	111 aa		12.37	□□□□□ -0.43
RAP1B-222	ENST00000540781	SNAPIN	O95295	136 aa		12.37	□□□□□ -0.43
RAP1B-222	ENST00000540781	CDKN2A-AS1	Q9UH64	79 aa		12.37	□□□□□ -0.43
RAP1B-222	ENST00000540781	TRAPPC1	Q9Y5R8	145 aa		12.37	□□□□□ -0.43
RAP1B-222	ENST00000540781	GAGE2E	Q4V326	116 aa		12.36	□□□□□ -0.43
RAP1B-222	ENST00000540781	SVBP	Q8N300	66 aa		12.36	□□□□□ -0.43
RAP1B-222	ENST00000540781	GAGE2D	Q9UEU5	116 aa		12.36	□□□□□ -0.43
RAP1B-222	ENST00000540781	C6orf226	Q5I0X4	101 aa		12.35	□□□□□ -0.43
RAP1B-222	ENST00000540781	CKS1B	P61024	79 aa		12.34	□□□□□ -0.43

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