RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 FUSP35637 526 aaKnown RBP eCLIP12.67□□□□□ -0.38
DDX55-207ENST00000540763 CNBPP62633 177 aaKnown RBP12.67□□□□□ -0.38
DDX55-207ENST00000540763 SEC11AP67812 179 aa12.66□□□□□ -0.38
DDX55-207ENST00000540763 LINC00242Q5T6M2 205 aa12.66□□□□□ -0.38
DDX55-207ENST00000540763 BAGE3Q86Y29 109 aa12.66□□□□□ -0.38
DDX55-207ENST00000540763 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.65□□□□□ -0.38
DDX55-207ENST00000540763 MALP21145 153 aa12.65□□□□□ -0.38
DDX55-207ENST00000540763 PDZD11Q5EBL8 140 aa12.65□□□□□ -0.38
DDX55-207ENST00000540763 APOMO95445 188 aa12.64□□□□□ -0.39
DDX55-207ENST00000540763 RYR1P21817 5038 aa12.63□□□□□ -0.39
DDX55-207ENST00000540763 CDK2AP2O75956 126 aa12.63□□□□□ -0.39
DDX55-207ENST00000540763 ATP5LO75964 103 aa12.63□□□□□ -0.39
DDX55-207ENST00000540763 PMCHL1Q16048 86 aa12.63□□□□□ -0.39
DDX55-207ENST00000540763 LINC01561Q8N1V8 128 aa12.63□□□□□ -0.39
DDX55-207ENST00000540763 A0A087WZ39 114 aa12.62□□□□□ -0.39
DDX55-207ENST00000540763 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.62□□□□□ -0.39
DDX55-207ENST00000540763 HSBP1O75506 76 aa12.62□□□□□ -0.39
DDX55-207ENST00000540763 KRTAP10-1P60331 282 aa12.62□□□□□ -0.39
DDX55-207ENST00000540763 HERVK_113P63121 156 aa12.62□□□□□ -0.39
DDX55-207ENST00000540763 PMVKQ15126 192 aa12.62□□□□□ -0.39
DDX55-207ENST00000540763 ZC2HC1BQ5TFG8 222 aa12.62□□□□□ -0.39
DDX55-207ENST00000540763 C5orf38Q86SI9 138 aa12.62□□□□□ -0.39
DDX55-207ENST00000540763 C9orf163Q8N9P6 203 aa12.62□□□□□ -0.39
DDX55-207ENST00000540763 HIGD2BQ4VC39 106 aa12.61□□□□□ -0.39
DDX55-207ENST00000540763 OR10D4PQ8NGN7 298 aa12.61□□□□□ -0.39
DDX55-207ENST00000540763 SERF1AO75920 110 aa12.6□□□□□ -0.39
DDX55-207ENST00000540763 CST9LQ9H4G1 147 aa12.6□□□□□ -0.39
DDX55-207ENST00000540763 LRP1BQ9NZR2 4599 aa12.6□□□□□ -0.39
DDX55-207ENST00000540763 ZNF561-AS1K7EIQ3 104 aa12.59□□□□□ -0.39
DDX55-207ENST00000540763 LINC00310P59036 64 aa12.59□□□□□ -0.39
DDX55-207ENST00000540763 COX6A2Q02221 97 aa12.59□□□□□ -0.39
DDX55-207ENST00000540763 KRTAP4-5Q9BYR2 181 aa12.59□□□□□ -0.39
DDX55-207ENST00000540763 IGHV3-64A0A075B6Q5 118 aa12.58□□□□□ -0.4
DDX55-207ENST00000540763 TINCRA0A1B0GVN0 87 aa12.58□□□□□ -0.4
DDX55-207ENST00000540763 HIST1H2BKO60814 126 aa12.58□□□□□ -0.4
DDX55-207ENST00000540763 HIST1H2BJP06899 126 aa12.58□□□□□ -0.4
DDX55-207ENST00000540763 HIST1H2BOP23527 126 aa12.58□□□□□ -0.4
DDX55-207ENST00000540763 HIST1H2BBP33778 126 aa12.58□□□□□ -0.4
DDX55-207ENST00000540763 HIST1H2BDP58876 126 aa12.58□□□□□ -0.4
DDX55-207ENST00000540763 HIST1H2BCP62807 126 aa12.58□□□□□ -0.4
DDX55-207ENST00000540763 HIST2H2BEQ16778 126 aa12.58□□□□□ -0.4
DDX55-207ENST00000540763 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.58□□□□□ -0.4
DDX55-207ENST00000540763 HIST1H2BHQ93079 126 aa12.58□□□□□ -0.4
DDX55-207ENST00000540763 HIST1H2BNQ99877 126 aa12.58□□□□□ -0.4
DDX55-207ENST00000540763 HIST1H2BMQ99879 126 aa12.58□□□□□ -0.4
DDX55-207ENST00000540763 F8WDY8 70 aa12.57□□□□□ -0.4
DDX55-207ENST00000540763 SLPIP03973 132 aa12.57□□□□□ -0.4
DDX55-207ENST00000540763 Q6ZSA8 131 aa12.57□□□□□ -0.4
DDX55-207ENST00000540763 C2orf48Q96LS8 159 aa12.57□□□□□ -0.4
DDX55-207ENST00000540763 GEMIN7Q9H840 131 aaKnown RBP12.57□□□□□ -0.4
DDX55-207ENST00000540763 IGLV5-45A0A087WSX0 123 aa12.56□□□□□ -0.4
DDX55-207ENST00000540763 A0A0J9YXV3 536 aa12.56□□□□□ -0.4
DDX55-207ENST00000540763 SPAG11BQ08648 103 aa12.55□□□□□ -0.4
DDX55-207ENST00000540763 ORAOV1Q8WV07 137 aa12.55□□□□□ -0.4
DDX55-207ENST00000540763 IGLV4-69A0A075B6H9 119 aa12.54□□□□□ -0.4
DDX55-207ENST00000540763 LINC01620Q4KN68 170 aa12.54□□□□□ -0.4
DDX55-207ENST00000540763 FAM19A2Q8N3H0 131 aa12.54□□□□□ -0.4
DDX55-207ENST00000540763 IFI27L1Q96BM0 104 aa12.54□□□□□ -0.4
DDX55-207ENST00000540763 CARD19Q96LW7 228 aa12.54□□□□□ -0.4
DDX55-207ENST00000540763 PKIGQ9Y2B9 76 aa12.54□□□□□ -0.4
DDX55-207ENST00000540763 IGLC3P0DOY3 106 aa12.53□□□□□ -0.4
DDX55-207ENST00000540763 CDKN2A-AS1Q9UH64 79 aa12.53□□□□□ -0.4
DDX55-207ENST00000540763 TRAV12-1A0A0B4J245 112 aa12.52□□□□□ -0.41
DDX55-207ENST00000540763 SYCNQ0VAF6 134 aa12.52□□□□□ -0.41
DDX55-207ENST00000540763 LEPROTL1O95214 131 aa12.51□□□□□ -0.41
DDX55-207ENST00000540763 NDUFA6P56556 154 aa12.51□□□□□ -0.41
DDX55-207ENST00000540763 SDIM1Q6ZPB5 146 aa12.51□□□□□ -0.41
DDX55-207ENST00000540763 LINC00469Q8N7U9 141 aa12.51□□□□□ -0.41
DDX55-207ENST00000540763 LINC00526Q96FQ7 95 aa12.51□□□□□ -0.41
DDX55-207ENST00000540763 PACRGQ96M98 296 aaPredicted RBP12.51□□□□□ -0.41
DDX55-207ENST00000540763 CAMK2N2Q96S95 79 aa12.51□□□□□ -0.41
DDX55-207ENST00000540763 NUPR1O60356 82 aa12.5□□□□□ -0.41
DDX55-207ENST00000540763 CHAC1Q9BUX1 264 aa12.5□□□□□ -0.41
DDX55-207ENST00000540763 HSPB8Q9UJY1 196 aa12.5□□□□□ -0.41
DDX55-207ENST00000540763 ABCA13Q86UQ4 5058 aa12.49□□□□□ -0.41
DDX55-207ENST00000540763 XGP55808 180 aa12.49□□□□□ -0.41
DDX55-207ENST00000540763 KIAA0087Q14695 138 aa12.49□□□□□ -0.41
DDX55-207ENST00000540763 COA6Q5JTJ3 125 aaKnown RBP12.49□□□□□ -0.41
DDX55-207ENST00000540763 Q8IZM0 81 aa12.49□□□□□ -0.41
DDX55-207ENST00000540763 FAM30AQ9NZY2 134 aa12.49□□□□□ -0.41
DDX55-207ENST00000540763 H3BRM9 83 aa12.48□□□□□ -0.41
DDX55-207ENST00000540763 NDUFA1O15239 70 aa12.48□□□□□ -0.41
DDX55-207ENST00000540763 RNF151Q2KHN1 245 aa12.48□□□□□ -0.41
DDX55-207ENST00000540763 Q6ZRU5 148 aa12.48□□□□□ -0.41
DDX55-207ENST00000540763 MRPL35Q9NZE8 188 aaKnown RBP12.48□□□□□ -0.41
DDX55-207ENST00000540763 HSPG2P98160 4391 aa12.48□□□□□ -0.41
DDX55-207ENST00000540763 APOBP04114 4563 aaKnown RBP12.48□□□□□ -0.41
DDX55-207ENST00000540763 SMIM1B2RUZ4 78 aa12.47□□□□□ -0.41
DDX55-207ENST00000540763 CIRBPQ14011 172 aaKnown RBP12.47□□□□□ -0.41
DDX55-207ENST00000540763 CHTOPQ9Y3Y2 248 aaKnown RBP12.47□□□□□ -0.41
DDX55-207ENST00000540763 PRSS2P07478 247 aa12.46□□□□□ -0.41
DDX55-207ENST00000540763 F8VRH5 84 aa12.45□□□□□ -0.42
DDX55-207ENST00000540763 ZNF22P17026 224 aaPredicted RBP12.45□□□□□ -0.42
DDX55-207ENST00000540763 DNAH8Q96JB1 4490 aa12.45□□□□□ -0.42
DDX55-207ENST00000540763 C11orf86A6NJI1 115 aa12.44□□□□□ -0.42
DDX55-207ENST00000540763 CXCL5P42830 114 aa12.44□□□□□ -0.42
DDX55-207ENST00000540763 TRBV30A0A0K0K1B3 111 aa12.43□□□□□ -0.42
DDX55-207ENST00000540763 LOC107984640A0A0U1RRK4 108 aa12.42□□□□□ -0.42
DDX55-207ENST00000540763 FABP4P15090 132 aa12.42□□□□□ -0.42
DDX55-207ENST00000540763 C6orf226Q5I0X4 101 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms