RNA–Protein interactions for RNA: ENST00000540469.5

SFSWAP-209, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 3,536 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-209ENST00000540469 IGLV5-45A0A087WSX0 123 aa9.25□□□□□ -0.93
SFSWAP-209ENST00000540469 IGLV5-39A0A0G2JS06 123 aa9.25□□□□□ -0.93
SFSWAP-209ENST00000540469 OVOL2Q9BRP0 275 aa9.25□□□□□ -0.93
SFSWAP-209ENST00000540469 LECT2O14960 151 aa9.25□□□□□ -0.93
SFSWAP-209ENST00000540469 RPL36AP83881 106 aaKnown RBP9.25□□□□□ -0.93
SFSWAP-209ENST00000540469 RPL36ALQ969Q0 106 aaKnown RBP9.25□□□□□ -0.93
SFSWAP-209ENST00000540469 A0A087WYN8 130 aa9.24□□□□□ -0.93
SFSWAP-209ENST00000540469 PAX4O43316 350 aa9.24□□□□□ -0.93
SFSWAP-209ENST00000540469 OXTP01178 125 aa9.24□□□□□ -0.93
SFSWAP-209ENST00000540469 PSMB8P28062 276 aa9.24□□□□□ -0.93
SFSWAP-209ENST00000540469 BEAN1Q3B7T3 259 aa9.24□□□□□ -0.93
SFSWAP-209ENST00000540469 IGHV4-59P01825 116 aa9.23□□□□□ -0.93
SFSWAP-209ENST00000540469 C10orf105Q8TEF2 133 aa9.23□□□□□ -0.93
SFSWAP-209ENST00000540469 BBC3Q96PG8 261 aaPredicted RBP9.23□□□□□ -0.93
SFSWAP-209ENST00000540469 NCR3O14931 201 aa9.23□□□□□ -0.93
SFSWAP-209ENST00000540469 PFN2P35080 140 aa9.23□□□□□ -0.93
SFSWAP-209ENST00000540469 SERP2Q8N6R1 65 aa9.23□□□□□ -0.93
SFSWAP-209ENST00000540469 DEFB136Q30KP8 78 aa9.23□□□□□ -0.93
SFSWAP-209ENST00000540469 C2orf48Q96LS8 159 aa9.23□□□□□ -0.93
SFSWAP-209ENST00000540469 LINC00846Q9NV44 126 aa9.23□□□□□ -0.93
SFSWAP-209ENST00000540469 XCL2Q9UBD3 114 aa9.23□□□□□ -0.93
SFSWAP-209ENST00000540469 SLPIP03973 132 aa9.22□□□□□ -0.93
SFSWAP-209ENST00000540469 FLNBO75369 2602 aaKnown RBP9.22□□□□□ -0.93
SFSWAP-209ENST00000540469 MYO9AB2RTY4 2548 aa9.22□□□□□ -0.93
SFSWAP-209ENST00000540469 USP17L23D6RBM5 183 aa9.22□□□□□ -0.93
SFSWAP-209ENST00000540469 LINC00337Q8N6G1 96 aa9.22□□□□□ -0.93
SFSWAP-209ENST00000540469 DYNLRB2Q8TF09 96 aa9.22□□□□□ -0.93
SFSWAP-209ENST00000540469 UBE2E2Q96LR5 201 aa9.22□□□□□ -0.93
SFSWAP-209ENST00000540469 PF4P02776 101 aa9.22□□□□□ -0.93
SFSWAP-209ENST00000540469 RNASE1P07998 156 aaKnown RBP9.22□□□□□ -0.93
SFSWAP-209ENST00000540469 RPL28P46779 137 aaKnown RBP9.22□□□□□ -0.93
SFSWAP-209ENST00000540469 SMIM11BQ8TCY0 68 aa9.22□□□□□ -0.93
SFSWAP-209ENST00000540469 INSP01308 110 aa9.21□□□□□ -0.93
SFSWAP-209ENST00000540469 C11orf68Q9H3H3 251 aaKnown RBP9.21□□□□□ -0.93
SFSWAP-209ENST00000540469 TMEM258P61165 79 aa9.21□□□□□ -0.94
SFSWAP-209ENST00000540469 CELSR2Q9HCU4 2923 aa9.21□□□□□ -0.94
SFSWAP-209ENST00000540469 C9orf129Q5T035 196 aaKnown RBP9.21□□□□□ -0.94
SFSWAP-209ENST00000540469 PRORYQ9H606 182 aa9.21□□□□□ -0.94
SFSWAP-209ENST00000540469 SLURP1P55000 103 aa9.2□□□□□ -0.94
SFSWAP-209ENST00000540469 C22orf24Q9Y442 160 aa9.2□□□□□ -0.94
SFSWAP-209ENST00000540469 RBMY1BA6NDE4 496 aaKnown RBP9.2□□□□□ -0.94
SFSWAP-209ENST00000540469 RBMY1EA6NEQ0 496 aaKnown RBP9.2□□□□□ -0.94
SFSWAP-209ENST00000540469 MSMBP08118 114 aa9.2□□□□□ -0.94
SFSWAP-209ENST00000540469 RBMY1DP0C7P1 496 aaKnown RBP9.2□□□□□ -0.94
SFSWAP-209ENST00000540469 Q6JHZ5 121 aa9.19□□□□□ -0.94
SFSWAP-209ENST00000540469 DOPEY1Q5JWR5 2465 aa9.19□□□□□ -0.94
SFSWAP-209ENST00000540469 H0YGX0 51 aa9.19□□□□□ -0.94
SFSWAP-209ENST00000540469 COX7B2Q8TF08 81 aa9.19□□□□□ -0.94
SFSWAP-209ENST00000540469 NAV2Q8IVL1 2488 aa9.19□□□□□ -0.94
SFSWAP-209ENST00000540469 CCL19Q99731 98 aa9.18□□□□□ -0.94
SFSWAP-209ENST00000540469 DEFB112Q30KQ8 113 aa9.18□□□□□ -0.94
SFSWAP-209ENST00000540469 DPH3Q96FX2 82 aa9.18□□□□□ -0.94
SFSWAP-209ENST00000540469 RPS28P62857 69 aaKnown RBP9.18□□□□□ -0.94
SFSWAP-209ENST00000540469 TMEM243Q9BU79 118 aa9.17□□□□□ -0.94
SFSWAP-209ENST00000540469 CDC42SE2Q9NRR3 84 aa9.17□□□□□ -0.94
SFSWAP-209ENST00000540469 PKIGQ9Y2B9 76 aa9.17□□□□□ -0.94
SFSWAP-209ENST00000540469 TRAV23DV6A0A075B6W5 121 aa9.17□□□□□ -0.94
SFSWAP-209ENST00000540469 IGHV4-30-2A0A087WSY4 118 aa9.17□□□□□ -0.94
SFSWAP-209ENST00000540469 TMEM89A2RUT3 159 aa9.17□□□□□ -0.94
SFSWAP-209ENST00000540469 WFDC9Q8NEX5 89 aa9.17□□□□□ -0.94
SFSWAP-209ENST00000540469 ORMDL1Q9P0S3 153 aa9.17□□□□□ -0.94
SFSWAP-209ENST00000540469 K7EQD1 137 aa9.16□□□□□ -0.94
SFSWAP-209ENST00000540469 AVPP01185 164 aa9.16□□□□□ -0.94
SFSWAP-209ENST00000540469 Q96MF0 132 aa9.16□□□□□ -0.94
SFSWAP-209ENST00000540469 IGKV2-28A0A075B6P5 120 aa9.15□□□□□ -0.94
SFSWAP-209ENST00000540469 GHRHP01286 108 aa9.15□□□□□ -0.94
SFSWAP-209ENST00000540469 IGKV2D-28P01615 120 aa9.15□□□□□ -0.94
SFSWAP-209ENST00000540469 C11orf72Q8NBR9 251 aa9.15□□□□□ -0.94
SFSWAP-209ENST00000540469 SONP18583 2426 aaKnown RBP9.15□□□□□ -0.94
SFSWAP-209ENST00000540469 CCL18P55774 89 aa9.15□□□□□ -0.94
SFSWAP-209ENST00000540469 C1orf43Q9BWL3 253 aa9.15□□□□□ -0.94
SFSWAP-209ENST00000540469 C19orf84I3L1E1 186 aa9.15□□□□□ -0.95
SFSWAP-209ENST00000540469 NTM-AS1Q6ZSK4 140 aa9.14□□□□□ -0.95
SFSWAP-209ENST00000540469 LINC01561Q8N1V8 128 aa9.14□□□□□ -0.95
SFSWAP-209ENST00000540469 HILS1P60008 231 aa9.14□□□□□ -0.95
SFSWAP-209ENST00000540469 Q6ZTI0 123 aa9.14□□□□□ -0.95
SFSWAP-209ENST00000540469 STHQ8IWL8 128 aa9.14□□□□□ -0.95
SFSWAP-209ENST00000540469 MAP6D1Q9H9H5 199 aa9.14□□□□□ -0.95
SFSWAP-209ENST00000540469 S100A7L2Q5SY68 101 aa9.14□□□□□ -0.95
SFSWAP-209ENST00000540469 VPS13CQ709C8 3753 aa9.13□□□□□ -0.95
SFSWAP-209ENST00000540469 TRGV2A0A075B6R0 118 aa9.13□□□□□ -0.95
SFSWAP-209ENST00000540469 C18orf65Q6ZTR6 163 aa9.13□□□□□ -0.95
SFSWAP-209ENST00000540469 B4DSR2 109 aa9.13□□□□□ -0.95
SFSWAP-209ENST00000540469 C6orf226Q5I0X4 101 aa9.13□□□□□ -0.95
SFSWAP-209ENST00000540469 C20orf197Q8N268 126 aa9.13□□□□□ -0.95
SFSWAP-209ENST00000540469 ACANP16112 2415 aa9.12□□□□□ -0.95
SFSWAP-209ENST00000540469 JMJD1CQ15652 2540 aa9.11□□□□□ -0.95
SFSWAP-209ENST00000540469 ENHOQ6UWT2 76 aa9.11□□□□□ -0.95
SFSWAP-209ENST00000540469 TRBV10-1A0A0K0K1A3 114 aa9.11□□□□□ -0.95
SFSWAP-209ENST00000540469 NOP10Q9NPE3 64 aaKnown RBP9.11□□□□□ -0.95
SFSWAP-209ENST00000540469 SETD2Q9BYW2 2564 aaPredicted RBP9.1□□□□□ -0.95
SFSWAP-209ENST00000540469 Q5XG85 94 aa9.1□□□□□ -0.95
SFSWAP-209ENST00000540469 TMEM86BQ8N661 226 aa9.1□□□□□ -0.95
SFSWAP-209ENST00000540469 MAPK1IP1LQ8NDC0 245 aa9.1□□□□□ -0.95
SFSWAP-209ENST00000540469 UBL5Q9BZL1 73 aa9.1□□□□□ -0.95
SFSWAP-209ENST00000540469 FAM19A1Q7Z5A9 133 aa9.09□□□□□ -0.95
SFSWAP-209ENST00000540469 TRGV4A0A0C4DH28 118 aa9.09□□□□□ -0.95
SFSWAP-209ENST00000540469 WFDC11Q8NEX6 87 aa9.09□□□□□ -0.95
SFSWAP-209ENST00000540469 LOC100131303A0A0U1RQF7 123 aa9.09□□□□□ -0.95
SFSWAP-209ENST00000540469 CCKP06307 115 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms