RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 IGHV3OR16-8A0A075B7F1 116 aa9.2□□□□□ -0.94
DDX55-206ENST00000539934 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.2□□□□□ -0.94
DDX55-206ENST00000539934 A0A0J9YY99 117 aa9.2□□□□□ -0.94
DDX55-206ENST00000539934 ZNF73O43830 326 aaPredicted RBP9.2□□□□□ -0.94
DDX55-206ENST00000539934 IGHV4-59P01825 116 aa9.2□□□□□ -0.94
DDX55-206ENST00000539934 TRAV13-2A0A0B4J235 113 aa9.19□□□□□ -0.94
DDX55-206ENST00000539934 LST1O00453 97 aa9.19□□□□□ -0.94
DDX55-206ENST00000539934 Q6ZVQ6 151 aa9.19□□□□□ -0.94
DDX55-206ENST00000539934 TMEM223A0PJW6 202 aa9.18□□□□□ -0.94
DDX55-206ENST00000539934 F8VRH5 84 aa9.18□□□□□ -0.94
DDX55-206ENST00000539934 Q6ZS46 218 aa9.18□□□□□ -0.94
DDX55-206ENST00000539934 PHF5AQ7RTV0 110 aaKnown RBP9.18□□□□□ -0.94
DDX55-206ENST00000539934 UBE2D4Q9Y2X8 147 aa9.18□□□□□ -0.94
DDX55-206ENST00000539934 UBE2L6O14933 153 aa9.17□□□□□ -0.94
DDX55-206ENST00000539934 COX6CP09669 75 aa9.17□□□□□ -0.94
DDX55-206ENST00000539934 LYPD1Q8N2G4 141 aa9.17□□□□□ -0.94
DDX55-206ENST00000539934 ZFAND3Q9H8U3 227 aa9.17□□□□□ -0.94
DDX55-206ENST00000539934 H3BUA1 57 aa9.17□□□□□ -0.94
DDX55-206ENST00000539934 TMEM256-PLSCR3K7ERE1 68 aa9.17□□□□□ -0.94
DDX55-206ENST00000539934 GHRHP01286 108 aa9.17□□□□□ -0.94
DDX55-206ENST00000539934 PDE6HQ13956 83 aa9.17□□□□□ -0.94
DDX55-206ENST00000539934 TIMM17AQ99595 171 aa9.17□□□□□ -0.94
DDX55-206ENST00000539934 FSHBP01225 129 aa9.16□□□□□ -0.94
DDX55-206ENST00000539934 INAFM2P0DMQ5 153 aa9.16□□□□□ -0.94
DDX55-206ENST00000539934 FXYD7P58549 80 aa9.16□□□□□ -0.94
DDX55-206ENST00000539934 TRIAP1O43715 76 aa9.16□□□□□ -0.94
DDX55-206ENST00000539934 NXPH4O95158 308 aa9.16□□□□□ -0.94
DDX55-206ENST00000539934 FAM222AQ5U5X8 452 aa9.16□□□□□ -0.94
DDX55-206ENST00000539934 USMG5Q96IX5 58 aa9.16□□□□□ -0.94
DDX55-206ENST00000539934 MPLKIPQ8TAP9 179 aa9.15□□□□□ -0.94
DDX55-206ENST00000539934 IGHV3-11P01762 117 aa9.15□□□□□ -0.95
DDX55-206ENST00000539934 M0R3E3 92 aa9.14□□□□□ -0.95
DDX55-206ENST00000539934 PRSS2P07478 247 aa9.14□□□□□ -0.95
DDX55-206ENST00000539934 ARMS2P0C7Q2 107 aa9.14□□□□□ -0.95
DDX55-206ENST00000539934 Q1RN00 199 aa9.14□□□□□ -0.95
DDX55-206ENST00000539934 Q6YL49 198 aa9.14□□□□□ -0.95
DDX55-206ENST00000539934 PRNTQ86SH4 94 aa9.14□□□□□ -0.95
DDX55-206ENST00000539934 Q86TA4 180 aa9.14□□□□□ -0.95
DDX55-206ENST00000539934 KLK15Q9H2R5 256 aa9.14□□□□□ -0.95
DDX55-206ENST00000539934 IGHV3OR16-13A0A075B7E8 117 aa9.13□□□□□ -0.95
DDX55-206ENST00000539934 IGHV3-74A0A0B4J1X5 117 aa9.13□□□□□ -0.95
DDX55-206ENST00000539934 IGHV3-66A0A0C4DH42 116 aa9.13□□□□□ -0.95
DDX55-206ENST00000539934 DNAJC9-AS1A6NH13 148 aa9.13□□□□□ -0.95
DDX55-206ENST00000539934 CKS2P33552 79 aa9.13□□□□□ -0.95
DDX55-206ENST00000539934 PAPPA-AS1Q5QFB9 102 aa9.13□□□□□ -0.95
DDX55-206ENST00000539934 LINC00322Q6ZN03 302 aaPredicted RBP9.13□□□□□ -0.95
DDX55-206ENST00000539934 NRACQ8N912 160 aa9.13□□□□□ -0.95
DDX55-206ENST00000539934 CLPSL1A2RUU4 121 aa9.13□□□□□ -0.95
DDX55-206ENST00000539934 IGLV1-40P01703 118 aa9.13□□□□□ -0.95
DDX55-206ENST00000539934 PRB4P10163 310 aaPredicted RBP9.13□□□□□ -0.95
DDX55-206ENST00000539934 SMAD5-AS1Q9Y6J3 95 aa9.13□□□□□ -0.95
DDX55-206ENST00000539934 NOTCH3Q9UM47 2321 aa9.13□□□□□ -0.95
DDX55-206ENST00000539934 TRAV7A0A075B6U4 112 aa9.12□□□□□ -0.95
DDX55-206ENST00000539934 IGHV3-49A0A0A0MS15 119 aa9.12□□□□□ -0.95
DDX55-206ENST00000539934 EIF4EBP3O60516 100 aaPredicted RBP9.12□□□□□ -0.95
DDX55-206ENST00000539934 TRBV12-3P01733 135 aa9.12□□□□□ -0.95
DDX55-206ENST00000539934 ESRGQ1W209 222 aa9.12□□□□□ -0.95
DDX55-206ENST00000539934 ZNF580Q9UK33 172 aa9.12□□□□□ -0.95
DDX55-206ENST00000539934 IGLV2-11P01706 119 aa9.12□□□□□ -0.95
DDX55-206ENST00000539934 Q1T7F1 81 aa9.12□□□□□ -0.95
DDX55-206ENST00000539934 PRB2P02812 416 aaPredicted RBP9.11□□□□□ -0.95
DDX55-206ENST00000539934 UBE2BP63146 152 aa9.11□□□□□ -0.95
DDX55-206ENST00000539934 MRPL51Q4U2R6 128 aaKnown RBP9.11□□□□□ -0.95
DDX55-206ENST00000539934 LCA10Q71F78 164 aa9.11□□□□□ -0.95
DDX55-206ENST00000539934 ICOSQ9Y6W8 199 aa9.11□□□□□ -0.95
DDX55-206ENST00000539934 TRBV6-1A0A0K0K1D8 114 aa9.11□□□□□ -0.95
DDX55-206ENST00000539934 A8MUN3 132 aa9.11□□□□□ -0.95
DDX55-206ENST00000539934 NDUFA4O00483 81 aa9.11□□□□□ -0.95
DDX55-206ENST00000539934 S100A7L2Q5SY68 101 aa9.11□□□□□ -0.95
DDX55-206ENST00000539934 F8WEM9 126 aa9.1□□□□□ -0.95
DDX55-206ENST00000539934 ZNF80P51504 273 aaPredicted RBP9.1□□□□□ -0.95
DDX55-206ENST00000539934 IGFL4Q6B9Z1 124 aa9.1□□□□□ -0.95
DDX55-206ENST00000539934 F6UB75 175 aa9.09□□□□□ -0.95
DDX55-206ENST00000539934 A0A087WVE0 104 aa9.09□□□□□ -0.95
DDX55-206ENST00000539934 LAGE3Q14657 143 aa9.09□□□□□ -0.95
DDX55-206ENST00000539934 FAM229BQ4G0N7 80 aa9.09□□□□□ -0.95
DDX55-206ENST00000539934 ATP5EP2Q5VTU8 51 aa9.09□□□□□ -0.95
DDX55-206ENST00000539934 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.09□□□□□ -0.95
DDX55-206ENST00000539934 IGKV2-40A0A087WW87 121 aaPredicted RBP9.08□□□□□ -0.96
DDX55-206ENST00000539934 IGKV2D-40P01614 121 aaPredicted RBP9.08□□□□□ -0.96
DDX55-206ENST00000539934 ZNF876PQ49A33 203 aa9.08□□□□□ -0.96
DDX55-206ENST00000539934 C10orf99Q6UWK7 81 aa9.08□□□□□ -0.96
DDX55-206ENST00000539934 SOSTDC1Q6X4U4 206 aa9.08□□□□□ -0.96
DDX55-206ENST00000539934 ZNF702PQ9H963 129 aa9.08□□□□□ -0.96
DDX55-206ENST00000539934 OVOL2Q9BRP0 275 aa9.07□□□□□ -0.96
DDX55-206ENST00000539934 C8orf49Q96NF6 230 aa9.06□□□□□ -0.96
DDX55-206ENST00000539934 OPRPNQ99935 248 aaPredicted RBP9.06□□□□□ -0.96
DDX55-206ENST00000539934 H7C2G1 150 aa9.05□□□□□ -0.96
DDX55-206ENST00000539934 KRTAP10-3P60369 221 aa9.05□□□□□ -0.96
DDX55-206ENST00000539934 COL7A1Q02388 2944 aa9.05□□□□□ -0.96
DDX55-206ENST00000539934 IGKV3D-7A0A0C4DH55 119 aa9.05□□□□□ -0.96
DDX55-206ENST00000539934 RNASE1P07998 156 aaKnown RBP9.05□□□□□ -0.96
DDX55-206ENST00000539934 Q8TAT8 98 aa9.05□□□□□ -0.96
DDX55-206ENST00000539934 TENM3Q9P273 2699 aa9.04□□□□□ -0.96
DDX55-206ENST00000539934 FAM19A3Q7Z5A8 133 aa9.04□□□□□ -0.96
DDX55-206ENST00000539934 PRR25Q96S07 402 aa9.04□□□□□ -0.96
DDX55-206ENST00000539934 IGHV7-4-1A0A0J9YVY3 117 aa9.04□□□□□ -0.96
DDX55-206ENST00000539934 TRBV10-3A0A0K0K1G6 114 aa9.04□□□□□ -0.96
DDX55-206ENST00000539934 M0R381 172 aa9.04□□□□□ -0.96
DDX55-206ENST00000539934 RPL11P62913 178 aaKnown RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 190.9 ms