RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 PET117Q6UWS5 81 aa5.31□□□□□ -1.56
SSBP3-211ENST00000528787 OR10D4PQ8NGN7 298 aa5.31□□□□□ -1.56
SSBP3-211ENST00000528787 NTN5Q8WTR8 489 aaPredicted RBP5.31□□□□□ -1.56
SSBP3-211ENST00000528787 LYSTQ99698 3801 aa5.3□□□□□ -1.56
SSBP3-211ENST00000528787 IGLV10-54A0A075B6I4 117 aa5.3□□□□□ -1.56
SSBP3-211ENST00000528787 A0A087WZ39 114 aa5.3□□□□□ -1.56
SSBP3-211ENST00000528787 ZNF561-AS1K7EIQ3 104 aa5.3□□□□□ -1.56
SSBP3-211ENST00000528787 IGLC3P0DOY3 106 aa5.3□□□□□ -1.56
SSBP3-211ENST00000528787 CXCL5P42830 114 aa5.3□□□□□ -1.56
SSBP3-211ENST00000528787 SNRPEP62304 92 aaKnown RBP5.3□□□□□ -1.56
SSBP3-211ENST00000528787 KRTAP1-5Q9BYS1 174 aa5.3□□□□□ -1.56
SSBP3-211ENST00000528787 IGHV3OR16-9A0A0B4J2B5 98 aa5.29□□□□□ -1.56
SSBP3-211ENST00000528787 SYS1-DBNDD2H3BUS1 97 aa5.29□□□□□ -1.56
SSBP3-211ENST00000528787 DPM2O94777 84 aa5.29□□□□□ -1.56
SSBP3-211ENST00000528787 RNASE13Q5GAN3 156 aaKnown RBP5.29□□□□□ -1.56
SSBP3-211ENST00000528787 LINC00242Q5T6M2 205 aa5.29□□□□□ -1.56
SSBP3-211ENST00000528787 Q8N3U1 123 aa5.29□□□□□ -1.56
SSBP3-211ENST00000528787 CHAC1Q9BUX1 264 aa5.29□□□□□ -1.56
SSBP3-211ENST00000528787 PGPEP1Q9NXJ5 209 aa5.29□□□□□ -1.56
SSBP3-211ENST00000528787 IGLV5-45A0A087WSX0 123 aa5.28□□□□□ -1.56
SSBP3-211ENST00000528787 C5orf52A6NGY3 159 aa5.28□□□□□ -1.56
SSBP3-211ENST00000528787 H0Y8G0 127 aa5.28□□□□□ -1.56
SSBP3-211ENST00000528787 IGKCP01834 107 aa5.28□□□□□ -1.56
SSBP3-211ENST00000528787 GCSHP23434 173 aa5.28□□□□□ -1.56
SSBP3-211ENST00000528787 LINC00310P59036 64 aa5.28□□□□□ -1.56
SSBP3-211ENST00000528787 FOXI1Q12951 378 aa5.28□□□□□ -1.56
SSBP3-211ENST00000528787 TMEM170BQ5T4T1 132 aa5.28□□□□□ -1.56
SSBP3-211ENST00000528787 Q6ZRN7 208 aaPredicted RBP5.28□□□□□ -1.56
SSBP3-211ENST00000528787 LINC00173Q6ZV60 143 aa5.28□□□□□ -1.56
SSBP3-211ENST00000528787 HIST3H2BBQ8N257 126 aa5.28□□□□□ -1.56
SSBP3-211ENST00000528787 OPRPNQ99935 248 aaPredicted RBP5.28□□□□□ -1.56
SSBP3-211ENST00000528787 ALMS1Q8TCU4 4167 aa5.28□□□□□ -1.56
SSBP3-211ENST00000528787 IGHV3-64A0A075B6Q5 118 aa5.27□□□□□ -1.57
SSBP3-211ENST00000528787 A0A087WTM6 91 aa5.27□□□□□ -1.57
SSBP3-211ENST00000528787 A0A0J9YXV3 536 aa5.27□□□□□ -1.57
SSBP3-211ENST00000528787 C11orf86A6NJI1 115 aa5.27□□□□□ -1.57
SSBP3-211ENST00000528787 LINC00587B1AMM8 73 aa5.27□□□□□ -1.57
SSBP3-211ENST00000528787 HSBP1L1C9JCN9 74 aa5.27□□□□□ -1.57
SSBP3-211ENST00000528787 USP17L23D6RBM5 183 aa5.27□□□□□ -1.57
SSBP3-211ENST00000528787 NUPR1O60356 82 aa5.27□□□□□ -1.57
SSBP3-211ENST00000528787 KRTDAPP60985 99 aa5.27□□□□□ -1.57
SSBP3-211ENST00000528787 CKS1BP61024 79 aa5.27□□□□□ -1.57
SSBP3-211ENST00000528787 Q8IZM0 81 aa5.27□□□□□ -1.57
SSBP3-211ENST00000528787 C2orf48Q96LS8 159 aa5.27□□□□□ -1.57
SSBP3-211ENST00000528787 GVQW2A0A096LPI5 108 aaPredicted RBP5.26□□□□□ -1.57
SSBP3-211ENST00000528787 hDV102S1A0JD36 115 aa5.26□□□□□ -1.57
SSBP3-211ENST00000528787 NDUFA1O15239 70 aa5.26□□□□□ -1.57
SSBP3-211ENST00000528787 ODF1Q14990 250 aa5.26□□□□□ -1.57
SSBP3-211ENST00000528787 C6orf226Q5I0X4 101 aa5.26□□□□□ -1.57
SSBP3-211ENST00000528787 Q8N814 137 aa5.26□□□□□ -1.57
SSBP3-211ENST00000528787 ORAOV1Q8WV07 137 aa5.26□□□□□ -1.57
SSBP3-211ENST00000528787 FAM104AQ969W3 186 aa5.26□□□□□ -1.57
SSBP3-211ENST00000528787 HIST1H2BLQ99880 126 aa5.26□□□□□ -1.57
SSBP3-211ENST00000528787 MRPL35Q9NZE8 188 aaKnown RBP5.26□□□□□ -1.57
SSBP3-211ENST00000528787 CDKN2A-AS1Q9UH64 79 aa5.26□□□□□ -1.57
SSBP3-211ENST00000528787 PLECQ15149 4684 aaKnown RBP5.26□□□□□ -1.57
SSBP3-211ENST00000528787 IGLV4-69A0A075B6H9 119 aa5.25□□□□□ -1.57
SSBP3-211ENST00000528787 LRCOL1A6NCL2 159 aa5.25□□□□□ -1.57
SSBP3-211ENST00000528787 RTL8CO15255 209 aa5.25□□□□□ -1.57
SSBP3-211ENST00000528787 C3orf79P0CE67 100 aa5.25□□□□□ -1.57
SSBP3-211ENST00000528787 SPAG11BQ08648 103 aa5.25□□□□□ -1.57
SSBP3-211ENST00000528787 RNF151Q2KHN1 245 aa5.25□□□□□ -1.57
SSBP3-211ENST00000528787 LINC01545Q5VT33 79 aa5.25□□□□□ -1.57
SSBP3-211ENST00000528787 C5orf38Q86SI9 138 aa5.25□□□□□ -1.57
SSBP3-211ENST00000528787 PLEKHB2Q96CS7 222 aa5.25□□□□□ -1.57
SSBP3-211ENST00000528787 LINC00474Q9P2X8 69 aa5.25□□□□□ -1.57
SSBP3-211ENST00000528787 TRBV30A0A0K0K1B3 111 aa5.24□□□□□ -1.57
SSBP3-211ENST00000528787 ZNF22P17026 224 aaPredicted RBP5.24□□□□□ -1.57
SSBP3-211ENST00000528787 NMUP48645 174 aa5.24□□□□□ -1.57
SSBP3-211ENST00000528787 CNBPP62633 177 aaKnown RBP5.24□□□□□ -1.57
SSBP3-211ENST00000528787 LCE2DQ5TA82 110 aaPredicted RBP5.24□□□□□ -1.57
SSBP3-211ENST00000528787 KRTAP26-1Q6PEX3 210 aa5.24□□□□□ -1.57
SSBP3-211ENST00000528787 CAMK2N2Q96S95 79 aa5.24□□□□□ -1.57
SSBP3-211ENST00000528787 DNAH6Q9C0G6 4158 aa5.23□□□□□ -1.57
SSBP3-211ENST00000528787 IGLV5-52A0A0A0MRZ9 124 aa5.23□□□□□ -1.57
SSBP3-211ENST00000528787 TMEM223A0PJW6 202 aa5.23□□□□□ -1.57
SSBP3-211ENST00000528787 SCGB1D1O95968 90 aa5.23□□□□□ -1.57
SSBP3-211ENST00000528787 HERV-K104P63124 156 aa5.23□□□□□ -1.57
SSBP3-211ENST00000528787 SYCNQ0VAF6 134 aa5.23□□□□□ -1.57
SSBP3-211ENST00000528787 LINC00518Q8N0U6 118 aa5.23□□□□□ -1.57
SSBP3-211ENST00000528787 COX7B2Q8TF08 81 aa5.23□□□□□ -1.57
SSBP3-211ENST00000528787 CARD19Q96LW7 228 aa5.23□□□□□ -1.57
SSBP3-211ENST00000528787 TOMM7Q9P0U1 55 aa5.23□□□□□ -1.57
SSBP3-211ENST00000528787 KMT2AQ03164 3969 aa5.22□□□□□ -1.57
SSBP3-211ENST00000528787 IGLV5-39A0A0G2JS06 123 aa5.22□□□□□ -1.57
SSBP3-211ENST00000528787 MYMXA0A1B0GTQ4 84 aa5.22□□□□□ -1.57
SSBP3-211ENST00000528787 SMIM1B2RUZ4 78 aa5.22□□□□□ -1.57
SSBP3-211ENST00000528787 LEPROTO15243 131 aa5.22□□□□□ -1.57
SSBP3-211ENST00000528787 LGALS3P17931 250 aaKnown RBP5.22□□□□□ -1.57
SSBP3-211ENST00000528787 COX6A2Q02221 97 aa5.22□□□□□ -1.57
SSBP3-211ENST00000528787 TNP2Q05952 138 aa5.22□□□□□ -1.57
SSBP3-211ENST00000528787 CIRBPQ14011 172 aaKnown RBP5.22□□□□□ -1.57
SSBP3-211ENST00000528787 COX17Q14061 63 aa5.22□□□□□ -1.57
SSBP3-211ENST00000528787 ZC2HC1BQ5TFG8 222 aa5.22□□□□□ -1.57
SSBP3-211ENST00000528787 C15orf56Q8N910 161 aa5.22□□□□□ -1.57
SSBP3-211ENST00000528787 E9PLD3 99 aa5.21□□□□□ -1.58
SSBP3-211ENST00000528787 MAPKAPK5-AS1Q8N8E1 139 aa5.21□□□□□ -1.58
SSBP3-211ENST00000528787 COPS9Q8WXC6 57 aa5.21□□□□□ -1.58
SSBP3-211ENST00000528787 CBY1Q9Y3M2 126 aa5.21□□□□□ -1.58
SSBP3-211ENST00000528787 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms