RNA–Protein interactions for RNA: ENST00000528475.1

GSDMD-208, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 2,067 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-208ENST00000528475 SNCGO76070 127 aa16.56■□□□□ 0.24
GSDMD-208ENST00000528475 IGLV1-51P01701 117 aa16.55■□□□□ 0.24
GSDMD-208ENST00000528475 FAM240AA0A1B0GVK7 77 aa16.55■□□□□ 0.24
GSDMD-208ENST00000528475 GAGE7O76087 117 aa16.55■□□□□ 0.24
GSDMD-208ENST00000528475 GAGE12FP0CL80 117 aa16.55■□□□□ 0.24
GSDMD-208ENST00000528475 GAGE12GP0CL81 117 aa16.55■□□□□ 0.24
GSDMD-208ENST00000528475 GAGE12IP0CL82 117 aa16.55■□□□□ 0.24
GSDMD-208ENST00000528475 CSNK1G2-AS1Q8NCQ2 148 aa16.55■□□□□ 0.24
GSDMD-208ENST00000528475 LINC01006Q8NI28 216 aa16.55■□□□□ 0.24
GSDMD-208ENST00000528475 TRGV2A0A075B6R0 118 aa16.54■□□□□ 0.24
GSDMD-208ENST00000528475 A0A0U1RRA0 63 aa16.54■□□□□ 0.24
GSDMD-208ENST00000528475 Q6Q795 121 aa16.54■□□□□ 0.24
GSDMD-208ENST00000528475 AKAP9Q99996 3911 aa16.54■□□□□ 0.24
GSDMD-208ENST00000528475 MRPL23Q16540 153 aaKnown RBP16.54■□□□□ 0.24
GSDMD-208ENST00000528475 RNASE1P07998 156 aaKnown RBP16.52■□□□□ 0.24
GSDMD-208ENST00000528475 GAGE2BQ13066 116 aa16.52■□□□□ 0.23
GSDMD-208ENST00000528475 GAGE2EQ4V326 116 aa16.52■□□□□ 0.23
GSDMD-208ENST00000528475 GAGE2DQ9UEU5 116 aa16.52■□□□□ 0.23
GSDMD-208ENST00000528475 LOC100131303A0A0U1RQF7 123 aa16.5■□□□□ 0.23
GSDMD-208ENST00000528475 CRLF1O75462 422 aa16.5■□□□□ 0.23
GSDMD-208ENST00000528475 WFDC10AQ9H1F0 79 aa16.5■□□□□ 0.23
GSDMD-208ENST00000528475 RPL35AP18077 110 aaKnown RBP16.5■□□□□ 0.23
GSDMD-208ENST00000528475 TRGV4A0A0C4DH28 118 aa16.49■□□□□ 0.23
GSDMD-208ENST00000528475 C15orf53Q8NAA6 179 aa16.49■□□□□ 0.23
GSDMD-208ENST00000528475 TRACP01848 142 aa16.48■□□□□ 0.23
GSDMD-208ENST00000528475 PF4P02776 101 aa16.48■□□□□ 0.23
GSDMD-208ENST00000528475 KRTAP1-1Q07627 177 aa16.48■□□□□ 0.23
GSDMD-208ENST00000528475 COX7B2Q8TF08 81 aa16.48■□□□□ 0.23
GSDMD-208ENST00000528475 ANAPC13Q9BS18 74 aa16.48■□□□□ 0.23
GSDMD-208ENST00000528475 TRAV26-1A0A087WT03 109 aa16.47■□□□□ 0.23
GSDMD-208ENST00000528475 FAM222AQ5U5X8 452 aa16.47■□□□□ 0.23
GSDMD-208ENST00000528475 FHL2Q14192 279 aa16.47■□□□□ 0.23
GSDMD-208ENST00000528475 NBPF19A0A087WUL8 3843 aa16.46■□□□□ 0.23
GSDMD-208ENST00000528475 TRBV6-8A0A0A6YYG3 113 aa16.46■□□□□ 0.23
GSDMD-208ENST00000528475 GAGE6Q13070 117 aa16.45■□□□□ 0.22
GSDMD-208ENST00000528475 TRAV13-2A0A0B4J235 113 aa16.44■□□□□ 0.22
GSDMD-208ENST00000528475 ITPR3Q14573 2671 aa16.42■□□□□ 0.22
GSDMD-208ENST00000528475 IGLV4-60A0A075B6I1 120 aa16.42■□□□□ 0.22
GSDMD-208ENST00000528475 IGHV3OR16-9A0A0B4J2B5 98 aa16.42■□□□□ 0.22
GSDMD-208ENST00000528475 RPL28P46779 137 aaKnown RBP16.42■□□□□ 0.22
GSDMD-208ENST00000528475 WNK1Q9H4A3 2382 aa16.42■□□□□ 0.22
GSDMD-208ENST00000528475 PDZD2O15018 2839 aa16.42■□□□□ 0.22
GSDMD-208ENST00000528475 NDUFV3P56181 108 aaKnown RBP16.41■□□□□ 0.22
GSDMD-208ENST00000528475 HELZ2Q9BYK8 2649 aaKnown RBP16.41■□□□□ 0.22
GSDMD-208ENST00000528475 ACYP1P07311 99 aa16.41■□□□□ 0.22
GSDMD-208ENST00000528475 NHLRC4P0CG21 123 aaPredicted RBP16.41■□□□□ 0.22
GSDMD-208ENST00000528475 MIR7-3HGQ8N6C7 128 aa16.41■□□□□ 0.22
GSDMD-208ENST00000528475 ZNF469Q96JG9 3925 aaPredicted RBP16.4■□□□□ 0.22
GSDMD-208ENST00000528475 A0A087WZ39 114 aa16.39■□□□□ 0.21
GSDMD-208ENST00000528475 CRPP02741 224 aa16.39■□□□□ 0.21
GSDMD-208ENST00000528475 CHCHD5Q9BSY4 110 aa16.39■□□□□ 0.21
GSDMD-208ENST00000528475 TTC32Q5I0X7 151 aa16.38■□□□□ 0.21
GSDMD-208ENST00000528475 KIR2DL5BQ8NHK3 375 aa16.38■□□□□ 0.21
GSDMD-208ENST00000528475 LINC00612Q8N6U2 182 aa16.38■□□□□ 0.21
GSDMD-208ENST00000528475 IBA57-AS1B1ANH7 110 aa16.37■□□□□ 0.21
GSDMD-208ENST00000528475 SND1-IT1Q9HBX3 110 aa16.37■□□□□ 0.21
GSDMD-208ENST00000528475 TOMM7Q9P0U1 55 aa16.37■□□□□ 0.21
GSDMD-208ENST00000528475 TLN2Q9Y4G6 2542 aa16.37■□□□□ 0.21
GSDMD-208ENST00000528475 IGKV2-28A0A075B6P5 120 aa16.36■□□□□ 0.21
GSDMD-208ENST00000528475 IGKV2D-28P01615 120 aa16.36■□□□□ 0.21
GSDMD-208ENST00000528475 FAM218AQ96MZ4 157 aa16.36■□□□□ 0.21
GSDMD-208ENST00000528475 BAALC-AS2P0C853 105 aa16.36■□□□□ 0.21
GSDMD-208ENST00000528475 LINC00337Q8N6G1 96 aa16.36■□□□□ 0.21
GSDMD-208ENST00000528475 SONP18583 2426 aaKnown RBP16.35■□□□□ 0.21
GSDMD-208ENST00000528475 IGKV3OR2-268A0A0C4DH90 116 aa16.34■□□□□ 0.21
GSDMD-208ENST00000528475 TRBV7-7A0A0K0K1E9 115 aa16.34■□□□□ 0.21
GSDMD-208ENST00000528475 C22orf24Q9Y442 160 aa16.34■□□□□ 0.21
GSDMD-208ENST00000528475 CCDC168Q8NDH2 2452 aa16.33■□□□□ 0.21
GSDMD-208ENST00000528475 LINC00158P58513 81 aa16.33■□□□□ 0.21
GSDMD-208ENST00000528475 HILS1P60008 231 aa16.33■□□□□ 0.21
GSDMD-208ENST00000528475 LINC00959A0A1B0GUT2 108 aa16.32■□□□□ 0.2
GSDMD-208ENST00000528475 CCL18P55774 89 aa16.31■□□□□ 0.2
GSDMD-208ENST00000528475 FLNAP21333 2647 aaKnown RBP16.3■□□□□ 0.2
GSDMD-208ENST00000528475 NOTCH3Q9UM47 2321 aa16.29■□□□□ 0.2
GSDMD-208ENST00000528475 A0A1B0GUV1 79 aa16.29■□□□□ 0.2
GSDMD-208ENST00000528475 C5orf38Q86SI9 138 aa16.29■□□□□ 0.2
GSDMD-208ENST00000528475 SETXQ7Z333 2677 aaKnown RBP16.28■□□□□ 0.2
GSDMD-208ENST00000528475 CFAP161Q6P656 301 aa16.28■□□□□ 0.2
GSDMD-208ENST00000528475 UNC79Q9P2D8 2635 aa16.28■□□□□ 0.2
GSDMD-208ENST00000528475 DEFB130BP0DP73 79 aa16.28■□□□□ 0.2
GSDMD-208ENST00000528475 DEFB130AP0DP74 79 aa16.28■□□□□ 0.2
GSDMD-208ENST00000528475 SMIM11BQ8TCY0 68 aa16.28■□□□□ 0.2
GSDMD-208ENST00000528475 H0YGX0 51 aa16.27■□□□□ 0.2
GSDMD-208ENST00000528475 SDIM1Q6ZPB5 146 aa16.27■□□□□ 0.2
GSDMD-208ENST00000528475 IMUPQ9GZP8 106 aa16.27■□□□□ 0.2
GSDMD-208ENST00000528475 INAFM2P0DMQ5 153 aa16.26■□□□□ 0.19
GSDMD-208ENST00000528475 LINC01561Q8N1V8 128 aa16.26■□□□□ 0.19
GSDMD-208ENST00000528475 ITPR2Q14571 2701 aa16.26■□□□□ 0.19
GSDMD-208ENST00000528475 GYPEP15421 78 aa16.26■□□□□ 0.19
GSDMD-208ENST00000528475 MALP21145 153 aa16.26■□□□□ 0.19
GSDMD-208ENST00000528475 SMIM9A6NGZ8 99 aa16.25■□□□□ 0.19
GSDMD-208ENST00000528475 SS18Q15532 418 aa16.24■□□□□ 0.19
GSDMD-208ENST00000528475 LINC00643Q86TS7 51 aa16.23■□□□□ 0.19
GSDMD-208ENST00000528475 LINC00482Q8N8I6 264 aa16.23■□□□□ 0.19
GSDMD-208ENST00000528475 X6R8D5 127 aa16.23■□□□□ 0.19
GSDMD-208ENST00000528475 NF1P21359 2839 aa16.23■□□□□ 0.19
GSDMD-208ENST00000528475 Q9HAA7 133 aa16.23■□□□□ 0.19
GSDMD-208ENST00000528475 GCN1Q92616 2671 aaKnown RBP16.23■□□□□ 0.19
GSDMD-208ENST00000528475 PFN2P35080 140 aa16.22■□□□□ 0.19
GSDMD-208ENST00000528475 C6orf226Q5I0X4 101 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms