RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 Q6ZSN1 163 aa5.53□□□□□ -1.52
SOX6-211ENST00000528429 TRGV2A0A075B6R0 118 aa5.52□□□□□ -1.53
SOX6-211ENST00000528429 LINC01546A6NGU7 62 aa5.52□□□□□ -1.53
SOX6-211ENST00000528429 VCYO14598 125 aa5.52□□□□□ -1.53
SOX6-211ENST00000528429 CRYGAP11844 174 aa5.52□□□□□ -1.53
SOX6-211ENST00000528429 FXYD2P54710 66 aa5.52□□□□□ -1.53
SOX6-211ENST00000528429 DEFB135Q30KP9 77 aa5.52□□□□□ -1.53
SOX6-211ENST00000528429 LGALS9BQ3B8N2 356 aa5.52□□□□□ -1.53
SOX6-211ENST00000528429 ORMDL2Q53FV1 153 aa5.52□□□□□ -1.53
SOX6-211ENST00000528429 LGALS9CQ6DKI2 356 aa5.52□□□□□ -1.53
SOX6-211ENST00000528429 PHLDA1Q8WV24 401 aaPredicted RBP5.52□□□□□ -1.53
SOX6-211ENST00000528429 C16orf74Q96GX8 76 aa5.52□□□□□ -1.53
SOX6-211ENST00000528429 IGLL5B9A064 214 aa5.52□□□□□ -1.53
SOX6-211ENST00000528429 TCL1BO95988 128 aa5.52□□□□□ -1.53
SOX6-211ENST00000528429 POLR2KP53803 58 aaKnown RBP5.52□□□□□ -1.53
SOX6-211ENST00000528429 TEN1Q86WV5 123 aa5.52□□□□□ -1.53
SOX6-211ENST00000528429 CEND1Q8N111 149 aa5.52□□□□□ -1.53
SOX6-211ENST00000528429 C2orf66Q6UXQ4 117 aa5.51□□□□□ -1.53
SOX6-211ENST00000528429 HIGD1BQ9P298 99 aa5.51□□□□□ -1.53
SOX6-211ENST00000528429 NOTCH1P46531 2555 aa5.51□□□□□ -1.53
SOX6-211ENST00000528429 TRBV6-5A0A0K0K1A5 114 aa5.51□□□□□ -1.53
SOX6-211ENST00000528429 PLAC8L1A1L4L8 177 aa5.51□□□□□ -1.53
SOX6-211ENST00000528429 PIK3CD-AS1Q5SR53 167 aa5.51□□□□□ -1.53
SOX6-211ENST00000528429 CEMP1Q6PRD7 247 aaPredicted RBP5.51□□□□□ -1.53
SOX6-211ENST00000528429 SCGB3A1Q96QR1 104 aa5.51□□□□□ -1.53
SOX6-211ENST00000528429 TRBV27A0A0K0K1C4 114 aa5.51□□□□□ -1.53
SOX6-211ENST00000528429 DEFB4AO15263 64 aa5.51□□□□□ -1.53
SOX6-211ENST00000528429 IGHV4-30-4P0DP06 118 aa5.51□□□□□ -1.53
SOX6-211ENST00000528429 DEFB130BP0DP73 79 aa5.51□□□□□ -1.53
SOX6-211ENST00000528429 DEFB130AP0DP74 79 aa5.51□□□□□ -1.53
SOX6-211ENST00000528429 RPL39P62891 51 aaKnown RBP5.51□□□□□ -1.53
SOX6-211ENST00000528429 ZFP2Q6ZN57 461 aa5.51□□□□□ -1.53
SOX6-211ENST00000528429 NHP2Q9NX24 153 aaKnown RBP5.51□□□□□ -1.53
SOX6-211ENST00000528429 RBM12B-AS1Q9P1G2 102 aa5.51□□□□□ -1.53
SOX6-211ENST00000528429 IGHV3-38A0A0C4DH36 116 aa5.5□□□□□ -1.53
SOX6-211ENST00000528429 DKK2Q9UBU2 259 aa5.5□□□□□ -1.53
SOX6-211ENST00000528429 C12orf74Q32Q52 190 aa5.5□□□□□ -1.53
SOX6-211ENST00000528429 NEXN-AS1Q8NBZ9 246 aa5.5□□□□□ -1.53
SOX6-211ENST00000528429 TOMM6Q96B49 74 aa5.5□□□□□ -1.53
SOX6-211ENST00000528429 CHAC1Q9BUX1 264 aa5.5□□□□□ -1.53
SOX6-211ENST00000528429 I3L3M4 83 aa5.49□□□□□ -1.53
SOX6-211ENST00000528429 K7EMI3 77 aa5.49□□□□□ -1.53
SOX6-211ENST00000528429 COX7CP15954 63 aa5.49□□□□□ -1.53
SOX6-211ENST00000528429 KRTAP10-11P60412 298 aa5.49□□□□□ -1.53
SOX6-211ENST00000528429 X6R8D5 127 aa5.49□□□□□ -1.53
SOX6-211ENST00000528429 TSHBP01222 138 aa5.49□□□□□ -1.53
SOX6-211ENST00000528429 TRGV4A0A0C4DH28 118 aa5.48□□□□□ -1.53
SOX6-211ENST00000528429 SS18Q15532 418 aa5.48□□□□□ -1.53
SOX6-211ENST00000528429 ATP5G1P05496 136 aa5.48□□□□□ -1.53
SOX6-211ENST00000528429 INAFM2P0DMQ5 153 aa5.48□□□□□ -1.53
SOX6-211ENST00000528429 SLC25A29Q8N8R3 303 aa5.48□□□□□ -1.53
SOX6-211ENST00000528429 K7EQD1 137 aa5.47□□□□□ -1.53
SOX6-211ENST00000528429 OVOL2Q9BRP0 275 aa5.47□□□□□ -1.53
SOX6-211ENST00000528429 MRPL35Q9NZE8 188 aaKnown RBP5.47□□□□□ -1.53
SOX6-211ENST00000528429 MGAM2Q2M2H8 2515 aa5.47□□□□□ -1.53
SOX6-211ENST00000528429 LOC100131303A0A0U1RQF7 123 aa5.47□□□□□ -1.53
SOX6-211ENST00000528429 OPRPNQ99935 248 aaPredicted RBP5.47□□□□□ -1.53
SOX6-211ENST00000528429 A0A0A0MQY5 61 aa5.46□□□□□ -1.54
SOX6-211ENST00000528429 IGHV4-28A0A0C4DH34 117 aa5.46□□□□□ -1.54
SOX6-211ENST00000528429 RPL36AP83881 106 aaKnown RBP5.46□□□□□ -1.54
SOX6-211ENST00000528429 RHOHQ15669 191 aa5.46□□□□□ -1.54
SOX6-211ENST00000528429 FAM222AQ5U5X8 452 aa5.46□□□□□ -1.54
SOX6-211ENST00000528429 RPL36ALQ969Q0 106 aaKnown RBP5.46□□□□□ -1.54
SOX6-211ENST00000528429 NBEAL1Q6ZS30 2694 aa5.46□□□□□ -1.54
SOX6-211ENST00000528429 TRBV7-3A0A075B6L6 115 aa5.46□□□□□ -1.54
SOX6-211ENST00000528429 IGKCP01834 107 aa5.46□□□□□ -1.54
SOX6-211ENST00000528429 C20orf203Q8NBC4 194 aa5.46□□□□□ -1.54
SOX6-211ENST00000528429 TRBV25-1A0A075B6N4 114 aa5.45□□□□□ -1.54
SOX6-211ENST00000528429 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.45□□□□□ -1.54
SOX6-211ENST00000528429 IGKV2-29A2NJV5 120 aaPredicted RBP5.45□□□□□ -1.54
SOX6-211ENST00000528429 IGIPA6NJ69 53 aa5.45□□□□□ -1.54
SOX6-211ENST00000528429 C8orf87E5RJ46 101 aa5.45□□□□□ -1.54
SOX6-211ENST00000528429 PRB2P02812 416 aaPredicted RBP5.45□□□□□ -1.54
SOX6-211ENST00000528429 IGKV2D-26A0A0A0MRZ7 120 aa5.45□□□□□ -1.54
SOX6-211ENST00000528429 Q6ZRU5 148 aa5.45□□□□□ -1.54
SOX6-211ENST00000528429 TRBV10-1A0A0K0K1A3 114 aa5.44□□□□□ -1.54
SOX6-211ENST00000528429 F8VRH5 84 aa5.44□□□□□ -1.54
SOX6-211ENST00000528429 EGFEM1PQ0D2K5 195 aa5.44□□□□□ -1.54
SOX6-211ENST00000528429 FHL2Q14192 279 aa5.44□□□□□ -1.54
SOX6-211ENST00000528429 RNASE13Q5GAN3 156 aaKnown RBP5.44□□□□□ -1.54
SOX6-211ENST00000528429 FP248Q71RG6 208 aaPredicted RBP5.44□□□□□ -1.54
SOX6-211ENST00000528429 HERVK_113P61574 105 aa5.44□□□□□ -1.54
SOX6-211ENST00000528429 TMEM141Q96I45 108 aa5.44□□□□□ -1.54
SOX6-211ENST00000528429 TIMM17AQ99595 171 aa5.44□□□□□ -1.54
SOX6-211ENST00000528429 TTTY13Q9BZ97 58 aa5.44□□□□□ -1.54
SOX6-211ENST00000528429 TRBV7-7A0A0K0K1E9 115 aa5.43□□□□□ -1.54
SOX6-211ENST00000528429 LINC01549A6NIU2 74 aa5.43□□□□□ -1.54
SOX6-211ENST00000528429 H3BT86 120 aa5.43□□□□□ -1.54
SOX6-211ENST00000528429 HTN3P15516 51 aa5.43□□□□□ -1.54
SOX6-211ENST00000528429 Q8NAQ8 132 aa5.43□□□□□ -1.54
SOX6-211ENST00000528429 MDFIQ99750 246 aa5.43□□□□□ -1.54
SOX6-211ENST00000528429 C11orf68Q9H3H3 251 aaKnown RBP5.43□□□□□ -1.54
SOX6-211ENST00000528429 CELA1Q9UNI1 258 aa5.43□□□□□ -1.54
SOX6-211ENST00000528429 TRAV12-1A0A0B4J245 112 aa5.43□□□□□ -1.54
SOX6-211ENST00000528429 TRBV6-4A0A1B0GX49 114 aa5.43□□□□□ -1.54
SOX6-211ENST00000528429 MIFP14174 115 aa5.43□□□□□ -1.54
SOX6-211ENST00000528429 PLNP26678 52 aa5.43□□□□□ -1.54
SOX6-211ENST00000528429 DAD1P61803 113 aa5.43□□□□□ -1.54
SOX6-211ENST00000528429 PAPPA-AS1Q5QFB9 102 aa5.43□□□□□ -1.54
SOX6-211ENST00000528429 CHCHD7Q9BUK0 85 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms