RNA–Protein interactions for RNA: ENST00000528001.1

CNKSR1-211, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 4

Gene CNKSR1, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-211ENST00000528001 CHCHD1Q96BP2 118 aaKnown RBP8.49□□□□□ -1.05
CNKSR1-211ENST00000528001 URB1-AS1Q96HZ7 61 aa8.49□□□□□ -1.05
CNKSR1-211ENST00000528001 SCGB3A1Q96QR1 104 aa8.49□□□□□ -1.05
CNKSR1-211ENST00000528001 F8WDY8 70 aa8.48□□□□□ -1.05
CNKSR1-211ENST00000528001 MALP21145 153 aa8.48□□□□□ -1.05
CNKSR1-211ENST00000528001 FUSP35637 526 aaKnown RBP eCLIP8.48□□□□□ -1.05
CNKSR1-211ENST00000528001 HBDP02042 147 aa8.47□□□□□ -1.05
CNKSR1-211ENST00000528001 LINC00242Q5T6M2 205 aa8.47□□□□□ -1.05
CNKSR1-211ENST00000528001 OR10D4PQ8NGN7 298 aa8.47□□□□□ -1.05
CNKSR1-211ENST00000528001 PKIGQ9Y2B9 76 aa8.47□□□□□ -1.05
CNKSR1-211ENST00000528001 APOBP04114 4563 aaKnown RBP8.47□□□□□ -1.05
CNKSR1-211ENST00000528001 A0A087WZ39 114 aa8.46□□□□□ -1.06
CNKSR1-211ENST00000528001 A0A096LNJ9 63 aa8.46□□□□□ -1.06
CNKSR1-211ENST00000528001 SLPIP03973 132 aa8.46□□□□□ -1.06
CNKSR1-211ENST00000528001 TRGC2P03986 189 aa8.46□□□□□ -1.06
CNKSR1-211ENST00000528001 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.45□□□□□ -1.06
CNKSR1-211ENST00000528001 ZNF561-AS1K7EIQ3 104 aa8.45□□□□□ -1.06
CNKSR1-211ENST00000528001 XGP55808 180 aa8.45□□□□□ -1.06
CNKSR1-211ENST00000528001 HERVK_113P63121 156 aa8.45□□□□□ -1.06
CNKSR1-211ENST00000528001 PDZD11Q5EBL8 140 aa8.45□□□□□ -1.06
CNKSR1-211ENST00000528001 C2orf48Q96LS8 159 aa8.45□□□□□ -1.06
CNKSR1-211ENST00000528001 HSPG2P98160 4391 aa8.45□□□□□ -1.06
CNKSR1-211ENST00000528001 DNAH8Q96JB1 4490 aa8.45□□□□□ -1.06
CNKSR1-211ENST00000528001 IGHV3-64A0A075B6Q5 118 aa8.44□□□□□ -1.06
CNKSR1-211ENST00000528001 ATP5LO75964 103 aa8.44□□□□□ -1.06
CNKSR1-211ENST00000528001 HIGD2BQ4VC39 106 aa8.44□□□□□ -1.06
CNKSR1-211ENST00000528001 SDIM1Q6ZPB5 146 aa8.44□□□□□ -1.06
CNKSR1-211ENST00000528001 C5orf38Q86SI9 138 aa8.44□□□□□ -1.06
CNKSR1-211ENST00000528001 S100A1P23297 94 aa8.43□□□□□ -1.06
CNKSR1-211ENST00000528001 PMVKQ15126 192 aa8.43□□□□□ -1.06
CNKSR1-211ENST00000528001 TINCRA0A1B0GVN0 87 aa8.42□□□□□ -1.06
CNKSR1-211ENST00000528001 COX6A2Q02221 97 aa8.42□□□□□ -1.06
CNKSR1-211ENST00000528001 CIRBPQ14011 172 aaKnown RBP8.42□□□□□ -1.06
CNKSR1-211ENST00000528001 CST9LQ9H4G1 147 aa8.42□□□□□ -1.06
CNKSR1-211ENST00000528001 FAM30AQ9NZY2 134 aa8.42□□□□□ -1.06
CNKSR1-211ENST00000528001 RYR1P21817 5038 aa8.42□□□□□ -1.06
CNKSR1-211ENST00000528001 IGLV4-69A0A075B6H9 119 aa8.41□□□□□ -1.06
CNKSR1-211ENST00000528001 IGLV5-45A0A087WSX0 123 aa8.41□□□□□ -1.06
CNKSR1-211ENST00000528001 SYCNQ0VAF6 134 aa8.41□□□□□ -1.06
CNKSR1-211ENST00000528001 RNF151Q2KHN1 245 aa8.41□□□□□ -1.06
CNKSR1-211ENST00000528001 BAGE3Q86Y29 109 aa8.41□□□□□ -1.06
CNKSR1-211ENST00000528001 Q8N1X5 172 aa8.41□□□□□ -1.06
CNKSR1-211ENST00000528001 CARD19Q96LW7 228 aa8.41□□□□□ -1.06
CNKSR1-211ENST00000528001 CHAC1Q9BUX1 264 aa8.41□□□□□ -1.06
CNKSR1-211ENST00000528001 SPAG11BQ08648 103 aa8.4□□□□□ -1.06
CNKSR1-211ENST00000528001 LINC01620Q4KN68 170 aa8.4□□□□□ -1.06
CNKSR1-211ENST00000528001 ZC2HC1BQ5TFG8 222 aa8.4□□□□□ -1.06
CNKSR1-211ENST00000528001 KRTAP4-5Q9BYR2 181 aa8.4□□□□□ -1.06
CNKSR1-211ENST00000528001 GEMIN7Q9H840 131 aaKnown RBP8.4□□□□□ -1.06
CNKSR1-211ENST00000528001 HSBP1O75506 76 aa8.39□□□□□ -1.07
CNKSR1-211ENST00000528001 SCO1O75880 301 aa8.39□□□□□ -1.07
CNKSR1-211ENST00000528001 ORAOV1Q8WV07 137 aa8.39□□□□□ -1.07
CNKSR1-211ENST00000528001 CAMK2N2Q96S95 79 aa8.39□□□□□ -1.07
CNKSR1-211ENST00000528001 MRPL35Q9NZE8 188 aaKnown RBP8.39□□□□□ -1.07
CNKSR1-211ENST00000528001 A0A0J9YXV3 536 aa8.38□□□□□ -1.07
CNKSR1-211ENST00000528001 IGLC3P0DOY3 106 aa8.38□□□□□ -1.07
CNKSR1-211ENST00000528001 KIAA0087Q14695 138 aa8.38□□□□□ -1.07
CNKSR1-211ENST00000528001 LINC00474Q9P2X8 69 aa8.38□□□□□ -1.07
CNKSR1-211ENST00000528001 TRAV12-1A0A0B4J245 112 aa8.37□□□□□ -1.07
CNKSR1-211ENST00000528001 NDUFA1O15239 70 aa8.37□□□□□ -1.07
CNKSR1-211ENST00000528001 PMCHL1Q16048 86 aa8.37□□□□□ -1.07
CNKSR1-211ENST00000528001 SCXQ7RTU7 201 aa8.37□□□□□ -1.07
CNKSR1-211ENST00000528001 Q8IZM0 81 aa8.37□□□□□ -1.07
CNKSR1-211ENST00000528001 CDKN2A-AS1Q9UH64 79 aa8.37□□□□□ -1.07
CNKSR1-211ENST00000528001 SERF1AO75920 110 aa8.36□□□□□ -1.07
CNKSR1-211ENST00000528001 LINC00310P59036 64 aa8.36□□□□□ -1.07
CNKSR1-211ENST00000528001 Q6ZRU5 148 aa8.36□□□□□ -1.07
CNKSR1-211ENST00000528001 LINC00469Q8N7U9 141 aa8.36□□□□□ -1.07
CNKSR1-211ENST00000528001 CIRBP-AS1Q8TBR5 109 aa8.36□□□□□ -1.07
CNKSR1-211ENST00000528001 SPACA4Q8TDM5 124 aa8.36□□□□□ -1.07
CNKSR1-211ENST00000528001 IFI27L1Q96BM0 104 aa8.36□□□□□ -1.07
CNKSR1-211ENST00000528001 PACRGQ96M98 296 aaPredicted RBP8.36□□□□□ -1.07
CNKSR1-211ENST00000528001 TRBV30A0A0K0K1B3 111 aa8.35□□□□□ -1.07
CNKSR1-211ENST00000528001 LOC107984640A0A0U1RRK4 108 aa8.35□□□□□ -1.07
CNKSR1-211ENST00000528001 H3BRM9 83 aa8.35□□□□□ -1.07
CNKSR1-211ENST00000528001 HIST1H2BKO60814 126 aa8.35□□□□□ -1.07
CNKSR1-211ENST00000528001 ATP6V1G1O75348 118 aa8.35□□□□□ -1.07
CNKSR1-211ENST00000528001 HIST1H2BJP06899 126 aa8.35□□□□□ -1.07
CNKSR1-211ENST00000528001 TLX1NBP0CAT3 122 aa8.35□□□□□ -1.07
CNKSR1-211ENST00000528001 HIST1H2BOP23527 126 aa8.35□□□□□ -1.07
CNKSR1-211ENST00000528001 HIST1H2BBP33778 126 aa8.35□□□□□ -1.07
CNKSR1-211ENST00000528001 CXCL5P42830 114 aa8.35□□□□□ -1.07
CNKSR1-211ENST00000528001 HIST1H2BDP58876 126 aa8.35□□□□□ -1.07
CNKSR1-211ENST00000528001 HIST1H2BCP62807 126 aa8.35□□□□□ -1.07
CNKSR1-211ENST00000528001 HIST2H2BEQ16778 126 aa8.35□□□□□ -1.07
CNKSR1-211ENST00000528001 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.35□□□□□ -1.07
CNKSR1-211ENST00000528001 HIST1H2BHQ93079 126 aa8.35□□□□□ -1.07
CNKSR1-211ENST00000528001 LINC00526Q96FQ7 95 aa8.35□□□□□ -1.07
CNKSR1-211ENST00000528001 HIST1H2BNQ99877 126 aa8.35□□□□□ -1.07
CNKSR1-211ENST00000528001 HIST1H2BMQ99879 126 aa8.35□□□□□ -1.07
CNKSR1-211ENST00000528001 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.35□□□□□ -1.07
CNKSR1-211ENST00000528001 SMIM1B2RUZ4 78 aa8.34□□□□□ -1.07
CNKSR1-211ENST00000528001 PRSS2P07478 247 aa8.34□□□□□ -1.07
CNKSR1-211ENST00000528001 LEPROTL1O95214 131 aa8.33□□□□□ -1.08
CNKSR1-211ENST00000528001 FAM19A2Q8N3H0 131 aa8.33□□□□□ -1.08
CNKSR1-211ENST00000528001 PLAC8Q9NZF1 115 aa8.33□□□□□ -1.08
CNKSR1-211ENST00000528001 HSPB8Q9UJY1 196 aa8.33□□□□□ -1.08
CNKSR1-211ENST00000528001 FAM229AH3BQW9 127 aa8.32□□□□□ -1.08
CNKSR1-211ENST00000528001 NDUFA6P56556 154 aa8.32□□□□□ -1.08
CNKSR1-211ENST00000528001 C6orf226Q5I0X4 101 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms