RNA–Protein interactions for RNA: ENST00000527825.1

CHD7-205, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-205ENST00000527825 TRBV10-2A0A0K0K1G8 114 aa2.91□□□□□ -1.94
CHD7-205ENST00000527825 C11orf86A6NJI1 115 aa2.91□□□□□ -1.94
CHD7-205ENST00000527825 M0R2P5 195 aa2.91□□□□□ -1.94
CHD7-205ENST00000527825 IGKV2D-40P01614 121 aaPredicted RBP2.91□□□□□ -1.94
CHD7-205ENST00000527825 IGHV3-33P01772 117 aa2.91□□□□□ -1.94
CHD7-205ENST00000527825 ATP5G1P05496 136 aa2.91□□□□□ -1.94
CHD7-205ENST00000527825 CFC1BP0CG36 223 aa2.91□□□□□ -1.94
CHD7-205ENST00000527825 CFC1P0CG37 223 aa2.91□□□□□ -1.94
CHD7-205ENST00000527825 SCGB1C2P0DMR2 95 aa2.91□□□□□ -1.94
CHD7-205ENST00000527825 GATA1P15976 413 aaPredicted RBP2.91□□□□□ -1.94
CHD7-205ENST00000527825 RPL7P18124 248 aaKnown RBP2.91□□□□□ -1.94
CHD7-205ENST00000527825 PSMB2P49721 201 aa2.91□□□□□ -1.94
CHD7-205ENST00000527825 RPS28P62857 69 aaKnown RBP2.91□□□□□ -1.94
CHD7-205ENST00000527825 ZNF415Q09FC8 603 aa2.91□□□□□ -1.94
CHD7-205ENST00000527825 KLK9Q2XQG4 91 aa2.91□□□□□ -1.94
CHD7-205ENST00000527825 LINC01620Q4KN68 170 aa2.91□□□□□ -1.94
CHD7-205ENST00000527825 FAM159AQ6UWV7 190 aa2.91□□□□□ -1.94
CHD7-205ENST00000527825 ZFP2Q6ZN57 461 aa2.91□□□□□ -1.94
CHD7-205ENST00000527825 Q6ZR54 194 aa2.91□□□□□ -1.94
CHD7-205ENST00000527825 Q8N6K4 173 aa2.91□□□□□ -1.94
CHD7-205ENST00000527825 SLC25A29Q8N8R3 303 aa2.91□□□□□ -1.94
CHD7-205ENST00000527825 ZNRF2Q8NHG8 242 aa2.91□□□□□ -1.94
CHD7-205ENST00000527825 BAALCQ8WXS3 180 aa2.91□□□□□ -1.94
CHD7-205ENST00000527825 PLEKHB2Q96CS7 222 aa2.91□□□□□ -1.94
CHD7-205ENST00000527825 C11orf68Q9H3H3 251 aaKnown RBP2.91□□□□□ -1.94
CHD7-205ENST00000527825 MSRB1Q9NZV6 116 aa2.91□□□□□ -1.94
CHD7-205ENST00000527825 KLK9Q9UKQ9 250 aa2.91□□□□□ -1.94
CHD7-205ENST00000527825 FLG2Q5D862 2391 aaPredicted RBP2.9□□□□□ -1.94
CHD7-205ENST00000527825 SRRM2Q9UQ35 2752 aaKnown RBP2.9□□□□□ -1.94
CHD7-205ENST00000527825 IGLV11-55A0A075B6I3 123 aa2.9□□□□□ -1.95
CHD7-205ENST00000527825 TMSB15BA0A087X1C1 80 aa2.9□□□□□ -1.95
CHD7-205ENST00000527825 TRAV8-2A0A0B4J237 113 aa2.9□□□□□ -1.95
CHD7-205ENST00000527825 TRAV8-4A0A0B4J246 113 aa2.9□□□□□ -1.95
CHD7-205ENST00000527825 IGKV3D-20A0A0C4DH25 116 aa2.9□□□□□ -1.95
CHD7-205ENST00000527825 LOC107984156A0A0G2JMH3 177 aa2.9□□□□□ -1.95
CHD7-205ENST00000527825 TRBV30A0A0K0K1B3 111 aa2.9□□□□□ -1.95
CHD7-205ENST00000527825 KRTAP29-1A8MX34 341 aaPredicted RBP2.9□□□□□ -1.95
CHD7-205ENST00000527825 C9JAW5 83 aa2.9□□□□□ -1.95
CHD7-205ENST00000527825 H3BMM0 161 aa2.9□□□□□ -1.95
CHD7-205ENST00000527825 DEFB4AO15263 64 aa2.9□□□□□ -1.95
CHD7-205ENST00000527825 NXPH4O95158 308 aa2.9□□□□□ -1.95
CHD7-205ENST00000527825 NDUFA3O95167 84 aa2.9□□□□□ -1.95
CHD7-205ENST00000527825 CRYGDP07320 174 aa2.9□□□□□ -1.95
CHD7-205ENST00000527825 HERVK_113P61574 105 aa2.9□□□□□ -1.95
CHD7-205ENST00000527825 ATXN8Q156A1 80 aa2.9□□□□□ -1.95
CHD7-205ENST00000527825 SDIM1Q6ZPB5 146 aa2.9□□□□□ -1.95
CHD7-205ENST00000527825 ARL17AQ8IVW1 177 aa2.9□□□□□ -1.95
CHD7-205ENST00000527825 C15orf53Q8NAA6 179 aa2.9□□□□□ -1.95
CHD7-205ENST00000527825 TMEM263Q8WUH6 116 aaKnown RBP2.9□□□□□ -1.95
CHD7-205ENST00000527825 UBE2WQ96B02 151 aa2.9□□□□□ -1.95
CHD7-205ENST00000527825 PRO1854Q9UHT4 67 aa2.9□□□□□ -1.95
CHD7-205ENST00000527825 PRO0628Q9UI54 55 aa2.9□□□□□ -1.95
CHD7-205ENST00000527825 LENEPQ9Y5L5 61 aa2.9□□□□□ -1.95
CHD7-205ENST00000527825 RNF213Q63HN8 5207 aa2.9□□□□□ -1.95
CHD7-205ENST00000527825 DEFB131BA0A096LNP1 70 aa2.89□□□□□ -1.95
CHD7-205ENST00000527825 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.89□□□□□ -1.95
CHD7-205ENST00000527825 IGHV7-81A0A0B4J1V7 117 aa2.89□□□□□ -1.95
CHD7-205ENST00000527825 SDHAF1A6NFY7 115 aa2.89□□□□□ -1.95
CHD7-205ENST00000527825 DUSP14O95147 198 aaKnown RBP2.89□□□□□ -1.95
CHD7-205ENST00000527825 RPL35AP18077 110 aaKnown RBP2.89□□□□□ -1.95
CHD7-205ENST00000527825 CRIP2P52943 208 aaPredicted RBP2.89□□□□□ -1.95
CHD7-205ENST00000527825 TSPEAR-AS2P59090 65 aa2.89□□□□□ -1.95
CHD7-205ENST00000527825 SUMO2P61956 95 aaKnown RBP2.89□□□□□ -1.95
CHD7-205ENST00000527825 DEFB114Q30KQ6 69 aa2.89□□□□□ -1.95
CHD7-205ENST00000527825 TMEM170BQ5T4T1 132 aa2.89□□□□□ -1.95
CHD7-205ENST00000527825 C9orf153Q5TBE3 101 aa2.89□□□□□ -1.95
CHD7-205ENST00000527825 C2orf66Q6UXQ4 117 aa2.89□□□□□ -1.95
CHD7-205ENST00000527825 Q6ZQT7 251 aa2.89□□□□□ -1.95
CHD7-205ENST00000527825 FAM19A5Q7Z5A7 132 aaPredicted RBP2.89□□□□□ -1.95
CHD7-205ENST00000527825 C6orf223Q8N319 242 aa2.89□□□□□ -1.95
CHD7-205ENST00000527825 Q8TAT8 98 aa2.89□□□□□ -1.95
CHD7-205ENST00000527825 SCGB3A1Q96QR1 104 aa2.89□□□□□ -1.95
CHD7-205ENST00000527825 TIMM17AQ99595 171 aa2.89□□□□□ -1.95
CHD7-205ENST00000527825 AGPAT4-IT1Q9H0P7 198 aa2.89□□□□□ -1.95
CHD7-205ENST00000527825 APOBP04114 4563 aaKnown RBP2.89□□□□□ -1.95
CHD7-205ENST00000527825 IGHV3-21A0A0B4J1V1 117 aa2.88□□□□□ -1.95
CHD7-205ENST00000527825 TINCRA0A1B0GVN0 87 aa2.88□□□□□ -1.95
CHD7-205ENST00000527825 IGIPA6NJ69 53 aa2.88□□□□□ -1.95
CHD7-205ENST00000527825 UQCRQO14949 82 aa2.88□□□□□ -1.95
CHD7-205ENST00000527825 NBR2O15453 112 aa2.88□□□□□ -1.95
CHD7-205ENST00000527825 PPP1R17O96001 155 aa2.88□□□□□ -1.95
CHD7-205ENST00000527825 TSHBP01222 138 aa2.88□□□□□ -1.95
CHD7-205ENST00000527825 SMR3BP02814 79 aaPredicted RBP2.88□□□□□ -1.95
CHD7-205ENST00000527825 ACYP1P07311 99 aa2.88□□□□□ -1.95
CHD7-205ENST00000527825 HIST1H4AP62805 103 aaKnown RBP2.88□□□□□ -1.95
CHD7-205ENST00000527825 SRSF9Q13242 221 aaKnown RBP eCLIP2.88□□□□□ -1.95
CHD7-205ENST00000527825 ZNF876PQ49A33 203 aa2.88□□□□□ -1.95
CHD7-205ENST00000527825 SCGB1D4Q6XE38 83 aa2.88□□□□□ -1.95
CHD7-205ENST00000527825 C9orf47Q6ZRZ4 202 aa2.88□□□□□ -1.95
CHD7-205ENST00000527825 Q6ZTC4 211 aa2.88□□□□□ -1.95
CHD7-205ENST00000527825 APRG1Q8IVJ8 170 aa2.88□□□□□ -1.95
CHD7-205ENST00000527825 NPBQ8NG41 125 aa2.88□□□□□ -1.95
CHD7-205ENST00000527825 LINC00526Q96FQ7 95 aa2.88□□□□□ -1.95
CHD7-205ENST00000527825 TMEM141Q96I45 108 aa2.88□□□□□ -1.95
CHD7-205ENST00000527825 TMEM101Q96IK0 257 aa2.88□□□□□ -1.95
CHD7-205ENST00000527825 DPH3P1Q9H4G8 78 aa2.88□□□□□ -1.95
CHD7-205ENST00000527825 C21orf62Q9NYP8 219 aa2.88□□□□□ -1.95
CHD7-205ENST00000527825 HMCN2Q8NDA2 5059 aa2.87□□□□□ -1.95
CHD7-205ENST00000527825 TRAV2A0A0B4J234 112 aa2.87□□□□□ -1.95
CHD7-205ENST00000527825 TRBV6-5A0A0K0K1A5 114 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms