RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 GAGE2AQ6NT46 116 aa10.83□□□□□ -0.68
USP47-207ENST00000527733 FHL2Q14192 279 aa10.83□□□□□ -0.68
USP47-207ENST00000527733 USP34Q70CQ2 3546 aa10.82□□□□□ -0.68
USP47-207ENST00000527733 IGKV2D-26A0A0A0MRZ7 120 aa10.82□□□□□ -0.68
USP47-207ENST00000527733 IGIPA6NJ69 53 aa10.82□□□□□ -0.68
USP47-207ENST00000527733 CD164L2Q6UWJ8 174 aa10.82□□□□□ -0.68
USP47-207ENST00000527733 FAM19A4Q96LR4 140 aa10.81□□□□□ -0.68
USP47-207ENST00000527733 ATRQ13535 2644 aa10.81□□□□□ -0.68
USP47-207ENST00000527733 PPDPFLQ8WWR9 84 aa10.81□□□□□ -0.68
USP47-207ENST00000527733 CITED1Q99966 193 aa10.81□□□□□ -0.68
USP47-207ENST00000527733 K7EP13 123 aa10.81□□□□□ -0.68
USP47-207ENST00000527733 CDC42SE2Q9NRR3 84 aa10.81□□□□□ -0.68
USP47-207ENST00000527733 LINC00959A0A1B0GUT2 108 aa10.8□□□□□ -0.68
USP47-207ENST00000527733 IGSF10Q6WRI0 2623 aa10.8□□□□□ -0.68
USP47-207ENST00000527733 BOD1L1Q8NFC6 3051 aa10.8□□□□□ -0.68
USP47-207ENST00000527733 Q6ZTC4 211 aa10.79□□□□□ -0.68
USP47-207ENST00000527733 KRTAP1-3Q8IUG1 177 aa10.79□□□□□ -0.68
USP47-207ENST00000527733 SIGMAR1Q99720 223 aa10.79□□□□□ -0.68
USP47-207ENST00000527733 IBA57-AS1B1ANH7 110 aa10.79□□□□□ -0.68
USP47-207ENST00000527733 RBMY1FQ15415 496 aaKnown RBP10.79□□□□□ -0.68
USP47-207ENST00000527733 G3V4G9 280 aa10.79□□□□□ -0.68
USP47-207ENST00000527733 NCR3O14931 201 aa10.79□□□□□ -0.68
USP47-207ENST00000527733 SPANXCQ9NY87 97 aa10.79□□□□□ -0.68
USP47-207ENST00000527733 UBE2D1P51668 147 aa10.78□□□□□ -0.68
USP47-207ENST00000527733 MAPKAPK5-AS1Q8N8E1 139 aa10.78□□□□□ -0.68
USP47-207ENST00000527733 C11orf72Q8NBR9 251 aa10.78□□□□□ -0.68
USP47-207ENST00000527733 ORMDL1Q9P0S3 153 aa10.78□□□□□ -0.68
USP47-207ENST00000527733 BAALC-AS2P0C853 105 aa10.77□□□□□ -0.69
USP47-207ENST00000527733 MAP1AP78559 2803 aaPredicted RBP10.77□□□□□ -0.69
USP47-207ENST00000527733 KIF25-AS1Q9Y6Z4 181 aa10.77□□□□□ -0.69
USP47-207ENST00000527733 Q6ZSN1 163 aa10.76□□□□□ -0.69
USP47-207ENST00000527733 TAX1BP3O14907 124 aa10.76□□□□□ -0.69
USP47-207ENST00000527733 ZFAND6Q6FIF0 208 aa10.76□□□□□ -0.69
USP47-207ENST00000527733 CHCHD7Q9BUK0 85 aa10.76□□□□□ -0.69
USP47-207ENST00000527733 OCIAD2Q56VL3 154 aa10.76□□□□□ -0.69
USP47-207ENST00000527733 DSCR8Q96T75 97 aa10.76□□□□□ -0.69
USP47-207ENST00000527733 NTN5Q8WTR8 489 aaPredicted RBP10.75□□□□□ -0.69
USP47-207ENST00000527733 IGKV2-24A0A0C4DH68 120 aa10.75□□□□□ -0.69
USP47-207ENST00000527733 SYCNQ0VAF6 134 aa10.75□□□□□ -0.69
USP47-207ENST00000527733 A8MZ25 164 aa10.74□□□□□ -0.69
USP47-207ENST00000527733 SPANXB1Q9NS25 103 aaPredicted RBP10.74□□□□□ -0.69
USP47-207ENST00000527733 TP73-AS1Q9UF72 201 aa10.74□□□□□ -0.69
USP47-207ENST00000527733 IGLV2-18A0A075B6J9 118 aa10.74□□□□□ -0.69
USP47-207ENST00000527733 CDK2AP2O75956 126 aa10.74□□□□□ -0.69
USP47-207ENST00000527733 C21orf62-AS1Q17RA5 79 aa10.74□□□□□ -0.69
USP47-207ENST00000527733 DIRC1Q969H9 104 aa10.74□□□□□ -0.69
USP47-207ENST00000527733 MGAM2Q2M2H8 2515 aa10.73□□□□□ -0.69
USP47-207ENST00000527733 LINC00242Q5T6M2 205 aa10.73□□□□□ -0.69
USP47-207ENST00000527733 DEFB105AQ8NG35 78 aa10.73□□□□□ -0.69
USP47-207ENST00000527733 LINC00308Q8TCZ7 52 aa10.73□□□□□ -0.69
USP47-207ENST00000527733 HIST1H4AP62805 103 aaKnown RBP10.72□□□□□ -0.69
USP47-207ENST00000527733 LINC01620Q4KN68 170 aa10.72□□□□□ -0.69
USP47-207ENST00000527733 CSDC2Q9Y534 153 aaKnown RBP10.72□□□□□ -0.69
USP47-207ENST00000527733 A0A0B4J2C4 111 aa10.72□□□□□ -0.69
USP47-207ENST00000527733 LINC00694P0DN24 101 aa10.72□□□□□ -0.69
USP47-207ENST00000527733 WFDC9Q8NEX5 89 aa10.72□□□□□ -0.69
USP47-207ENST00000527733 A0A096LNJ9 63 aa10.71□□□□□ -0.69
USP47-207ENST00000527733 NUPR2A6NF83 97 aa10.71□□□□□ -0.69
USP47-207ENST00000527733 ANKRD29Q8N6D5 301 aa10.71□□□□□ -0.69
USP47-207ENST00000527733 UBL5Q9BZL1 73 aa10.71□□□□□ -0.7
USP47-207ENST00000527733 FRYQ5TBA9 3013 aa10.7□□□□□ -0.7
USP47-207ENST00000527733 LECT2O14960 151 aa10.7□□□□□ -0.7
USP47-207ENST00000527733 TIMM17BO60830 172 aa10.7□□□□□ -0.7
USP47-207ENST00000527733 XAGE1AQ9HD64 81 aa10.7□□□□□ -0.7
USP47-207ENST00000527733 IGLV4-60A0A075B6I1 120 aa10.69□□□□□ -0.7
USP47-207ENST00000527733 PCP4P48539 62 aa10.69□□□□□ -0.7
USP47-207ENST00000527733 MUC4Q99102 2169 aa10.69□□□□□ -0.7
USP47-207ENST00000527733 LINC00315P59091 139 aa10.69□□□□□ -0.7
USP47-207ENST00000527733 KRTAP1-1Q07627 177 aa10.69□□□□□ -0.7
USP47-207ENST00000527733 LINC00526Q96FQ7 95 aa10.69□□□□□ -0.7
USP47-207ENST00000527733 UBE2AP49459 152 aa10.68□□□□□ -0.7
USP47-207ENST00000527733 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.68□□□□□ -0.7
USP47-207ENST00000527733 SPANXDQ9BXN6 97 aa10.68□□□□□ -0.7
USP47-207ENST00000527733 MAST4O15021 2626 aa10.68□□□□□ -0.7
USP47-207ENST00000527733 NBEAQ8NFP9 2946 aa10.68□□□□□ -0.7
USP47-207ENST00000527733 AMELXQ99217 191 aa10.68□□□□□ -0.7
USP47-207ENST00000527733 Q8IZM0 81 aa10.67□□□□□ -0.7
USP47-207ENST00000527733 CLEC2BQ92478 149 aa10.67□□□□□ -0.7
USP47-207ENST00000527733 H3BQ85 93 aa10.66□□□□□ -0.7
USP47-207ENST00000527733 NHLRC4P0CG21 123 aaPredicted RBP10.66□□□□□ -0.7
USP47-207ENST00000527733 MUC3AQ02505 3323 aa10.66□□□□□ -0.7
USP47-207ENST00000527733 M0R2N4 97 aa10.66□□□□□ -0.7
USP47-207ENST00000527733 IGLV4-69A0A075B6H9 119 aa10.66□□□□□ -0.7
USP47-207ENST00000527733 A0A1B0GUV1 79 aa10.66□□□□□ -0.7
USP47-207ENST00000527733 CELA1Q9UNI1 258 aa10.66□□□□□ -0.7
USP47-207ENST00000527733 CHD6Q8TD26 2715 aa10.66□□□□□ -0.7
USP47-207ENST00000527733 COX7BP24311 80 aa10.65□□□□□ -0.7
USP47-207ENST00000527733 POM121L12Q8N7R1 296 aa10.65□□□□□ -0.7
USP47-207ENST00000527733 X6R8D5 127 aa10.65□□□□□ -0.7
USP47-207ENST00000527733 HAMPP81172 84 aa10.65□□□□□ -0.7
USP47-207ENST00000527733 C2orf91Q6ZV80 131 aa10.65□□□□□ -0.7
USP47-207ENST00000527733 A0A087WZ39 114 aa10.65□□□□□ -0.71
USP47-207ENST00000527733 LY6G6CO95867 125 aa10.65□□□□□ -0.71
USP47-207ENST00000527733 LYPD5Q6UWN5 251 aa10.65□□□□□ -0.71
USP47-207ENST00000527733 SMIM1B2RUZ4 78 aa10.64□□□□□ -0.71
USP47-207ENST00000527733 UNC79Q9P2D8 2635 aa10.64□□□□□ -0.71
USP47-207ENST00000527733 H3BT86 120 aa10.63□□□□□ -0.71
USP47-207ENST00000527733 TRBV10-2A0A0K0K1G8 114 aa10.63□□□□□ -0.71
USP47-207ENST00000527733 TEN1Q86WV5 123 aa10.63□□□□□ -0.71
USP47-207ENST00000527733 WFDC2Q14508 124 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms