RNA–Protein interactions for RNA: ENST00000527389.2

ATM-211, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-211ENST00000527389 DEFB135Q30KP9 77 aa-0.94□□□□□ -2.56
ATM-211ENST00000527389 DEFB112Q30KQ8 113 aa-0.94□□□□□ -2.56
ATM-211ENST00000527389 C10orf128Q5T292 105 aa-0.94□□□□□ -2.56
ATM-211ENST00000527389 SMIM4Q8WVI0 70 aa-0.94□□□□□ -2.56
ATM-211ENST00000527389 LSM10Q969L4 123 aaKnown RBP-0.94□□□□□ -2.56
ATM-211ENST00000527389 SEC11CQ9BY50 192 aa-0.94□□□□□ -2.56
ATM-211ENST00000527389 SAR1AQ9NR31 198 aa-0.94□□□□□ -2.56
ATM-211ENST00000527389 KIF20BQ96Q89 1820 aa-0.94□□□□□ -2.56
ATM-211ENST00000527389 XRN1Q8IZH2 1706 aaKnown RBP-0.95□□□□□ -2.56
ATM-211ENST00000527389 KIAA1551Q9HCM1 1747 aa-0.95□□□□□ -2.56
ATM-211ENST00000527389 IGLC7A0M8Q6 106 aa-0.95□□□□□ -2.56
ATM-211ENST00000527389 A6NIN4 97 aa-0.95□□□□□ -2.56
ATM-211ENST00000527389 TSTD3H0UI37 97 aa-0.95□□□□□ -2.56
ATM-211ENST00000527389 NDUFB6O95139 128 aa-0.95□□□□□ -2.56
ATM-211ENST00000527389 TNFP01375 233 aa-0.95□□□□□ -2.56
ATM-211ENST00000527389 SMIM6P0DI80 62 aa-0.95□□□□□ -2.56
ATM-211ENST00000527389 CCDC153Q494R4 210 aa-0.95□□□□□ -2.56
ATM-211ENST00000527389 Q8N8P6 123 aa-0.95□□□□□ -2.56
ATM-211ENST00000527389 SKA2Q8WVK7 121 aaPredicted RBP-0.95□□□□□ -2.56
ATM-211ENST00000527389 SPTSSAQ969W0 71 aa-0.95□□□□□ -2.56
ATM-211ENST00000527389 MAGOHBQ96A72 148 aaKnown RBP-0.95□□□□□ -2.56
ATM-211ENST00000527389 SMIM3Q9BZL3 60 aa-0.95□□□□□ -2.56
ATM-211ENST00000527389 NDUFA4L2Q9NRX3 87 aa-0.95□□□□□ -2.56
ATM-211ENST00000527389 APLNQ9ULZ1 77 aa-0.95□□□□□ -2.56
ATM-211ENST00000527389 LENEPQ9Y5L5 61 aa-0.95□□□□□ -2.56
ATM-211ENST00000527389 V9GYH0 126 aa-0.95□□□□□ -2.56
ATM-211ENST00000527389 DNAH7Q8WXX0 4024 aa-0.95□□□□□ -2.56
ATM-211ENST00000527389 ZNF518AQ6AHZ1 1483 aa-0.95□□□□□ -2.56
ATM-211ENST00000527389 RNF213Q63HN8 5207 aa-0.95□□□□□ -2.56
ATM-211ENST00000527389 ADAMTS12P58397 1594 aa-0.96□□□□□ -2.56
ATM-211ENST00000527389 RYR2Q92736 4967 aa-0.96□□□□□ -2.56
ATM-211ENST00000527389 FRYQ5TBA9 3013 aa-0.96□□□□□ -2.56
ATM-211ENST00000527389 PPIP5K1Q6PFW1 1433 aa-0.96□□□□□ -2.56
ATM-211ENST00000527389 QRICH2Q9H0J4 1663 aa-0.96□□□□□ -2.56
ATM-211ENST00000527389 MTORP42345 2549 aa-0.96□□□□□ -2.56
ATM-211ENST00000527389 TRAV13-2A0A0B4J235 113 aa-0.96□□□□□ -2.56
ATM-211ENST00000527389 H0YJX3 145 aa-0.96□□□□□ -2.56
ATM-211ENST00000527389 SPINK4O60575 86 aa-0.96□□□□□ -2.56
ATM-211ENST00000527389 PIPP12273 146 aaPredicted RBP-0.96□□□□□ -2.56
ATM-211ENST00000527389 BAGE2Q86Y30 109 aa-0.96□□□□□ -2.56
ATM-211ENST00000527389 CTAGE3PQ8IX95 158 aa-0.96□□□□□ -2.56
ATM-211ENST00000527389 TTC9CQ8N5M4 171 aa-0.96□□□□□ -2.56
ATM-211ENST00000527389 LCN9Q8WX39 176 aa-0.96□□□□□ -2.56
ATM-211ENST00000527389 PSMG3Q9BT73 122 aaPredicted RBP-0.96□□□□□ -2.56
ATM-211ENST00000527389 MRPL40Q9NQ50 206 aaKnown RBP-0.96□□□□□ -2.56
ATM-211ENST00000527389 HSPB11Q9Y547 144 aa-0.96□□□□□ -2.56
ATM-211ENST00000527389 LINC01558Q9Y6Z2 57 aa-0.96□□□□□ -2.56
ATM-211ENST00000527389 PTPN23Q9H3S7 1636 aa-0.97□□□□□ -2.56
ATM-211ENST00000527389 FHAD1B1AJZ9 1412 aa-0.97□□□□□ -2.56
ATM-211ENST00000527389 POLA1P09884 1462 aaPredicted RBP-0.97□□□□□ -2.56
ATM-211ENST00000527389 A0A0G2JMZ2 1700 aa-0.97□□□□□ -2.56
ATM-211ENST00000527389 BCORQ6W2J9 1755 aa-0.97□□□□□ -2.56
ATM-211ENST00000527389 F8VRH5 84 aa-0.97□□□□□ -2.56
ATM-211ENST00000527389 ARPC5O15511 151 aa-0.97□□□□□ -2.56
ATM-211ENST00000527389 SNCGO76070 127 aa-0.97□□□□□ -2.56
ATM-211ENST00000527389 S100A3P33764 101 aa-0.97□□□□□ -2.56
ATM-211ENST00000527389 CKS1BP61024 79 aa-0.97□□□□□ -2.56
ATM-211ENST00000527389 LELP1Q5T871 98 aa-0.97□□□□□ -2.56
ATM-211ENST00000527389 C10orf113Q5VZT2 155 aa-0.97□□□□□ -2.56
ATM-211ENST00000527389 SMIM15Q7Z3B0 74 aa-0.97□□□□□ -2.56
ATM-211ENST00000527389 MMGT1Q8N4V1 131 aa-0.97□□□□□ -2.56
ATM-211ENST00000527389 DPH3Q96FX2 82 aa-0.97□□□□□ -2.56
ATM-211ENST00000527389 SPRR4Q96PI1 79 aa-0.97□□□□□ -2.56
ATM-211ENST00000527389 V9GYQ6 96 aa-0.97□□□□□ -2.56
ATM-211ENST00000527389 RELNP78509 3460 aa-0.97□□□□□ -2.57
ATM-211ENST00000527389 MYOM3Q5VTT5 1437 aa-0.98□□□□□ -2.57
ATM-211ENST00000527389 CHD1O14646 1710 aa-0.98□□□□□ -2.57
ATM-211ENST00000527389 MAGI1Q96QZ7 1491 aaPredicted RBP-0.98□□□□□ -2.57
ATM-211ENST00000527389 GNG14A0A1W2PPG7 69 aa-0.98□□□□□ -2.57
ATM-211ENST00000527389 UQCR11O14957 56 aa-0.98□□□□□ -2.57
ATM-211ENST00000527389 NEFHP12036 1026 aa-0.98□□□□□ -2.57
ATM-211ENST00000527389 HIST1H1DP16402 221 aaKnown RBP-0.98□□□□□ -2.57
ATM-211ENST00000527389 H1FX-AS1Q4G0G2 97 aa-0.98□□□□□ -2.57
ATM-211ENST00000527389 USP9XQ93008 2570 aaPredicted RBP-0.98□□□□□ -2.57
ATM-211ENST00000527389 LAMA3Q16787 3333 aa-0.98□□□□□ -2.57
ATM-211ENST00000527389 CUL7Q14999 1698 aa-0.98□□□□□ -2.57
ATM-211ENST00000527389 COL12A1Q99715 3063 aa-0.98□□□□□ -2.57
ATM-211ENST00000527389 CEP290O15078 2479 aa-0.98□□□□□ -2.57
ATM-211ENST00000527389 DYNC1H1Q14204 4646 aaKnown RBP-0.98□□□□□ -2.57
ATM-211ENST00000527389 SRCAPQ6ZRS2 3230 aa-0.98□□□□□ -2.57
ATM-211ENST00000527389 HMGN4O00479 90 aa-0.99□□□□□ -2.57
ATM-211ENST00000527389 NCR2O95944 276 aa-0.99□□□□□ -2.57
ATM-211ENST00000527389 MT1AP04731 61 aa-0.99□□□□□ -2.57
ATM-211ENST00000527389 DBIP07108 87 aaKnown RBP-0.99□□□□□ -2.57
ATM-211ENST00000527389 COX17Q14061 63 aa-0.99□□□□□ -2.57
ATM-211ENST00000527389 LINC00474Q9P2X8 69 aa-0.99□□□□□ -2.57
ATM-211ENST00000527389 KNDC1Q76NI1 1749 aa-0.99□□□□□ -2.57
ATM-211ENST00000527389 MON2Q7Z3U7 1717 aa-1□□□□□ -2.57
ATM-211ENST00000527389 SCN11AQ9UI33 1791 aa-1□□□□□ -2.57
ATM-211ENST00000527389 ACACBO00763 2458 aa-1□□□□□ -2.57
ATM-211ENST00000527389 TRBV7-3A0A075B6L6 115 aa-1□□□□□ -2.57
ATM-211ENST00000527389 TRBV7-4A0A0J9YYF1 115 aa-1□□□□□ -2.57
ATM-211ENST00000527389 CPSF4LA6NMK7 179 aaKnown RBP-1□□□□□ -2.57
ATM-211ENST00000527389 K7ERU9 68 aa-1□□□□□ -2.57
ATM-211ENST00000527389 NAA60Q9H7X0 242 aa-1□□□□□ -2.57
ATM-211ENST00000527389 MYH4Q9Y623 1939 aa-1□□□□□ -2.57
ATM-211ENST00000527389 C1orf167Q5SNV9 1468 aa-1□□□□□ -2.57
ATM-211ENST00000527389 C4AP0C0L4 1744 aa-1.01□□□□□ -2.57
ATM-211ENST00000527389 C4BP0C0L5 1744 aa-1.01□□□□□ -2.57
ATM-211ENST00000527389 SFT2D2O95562 160 aa-1.01□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms