RNA–Protein interactions for RNA: ENST00000524127.5

CTNNA1-241, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 483 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-241ENST00000524127 TRAV13-2A0A0B4J235 113 aa3.58□□□□□ -1.84
CTNNA1-241ENST00000524127 RS1O15537 224 aa3.58□□□□□ -1.84
CTNNA1-241ENST00000524127 IGHV3-11P01762 117 aa3.58□□□□□ -1.84
CTNNA1-241ENST00000524127 IGHV3-53P01767 116 aa3.58□□□□□ -1.84
CTNNA1-241ENST00000524127 RPL28P46779 137 aaKnown RBP3.58□□□□□ -1.84
CTNNA1-241ENST00000524127 DSCR9P59020 149 aa3.58□□□□□ -1.84
CTNNA1-241ENST00000524127 DAZ2Q13117 558 aaKnown RBP3.58□□□□□ -1.84
CTNNA1-241ENST00000524127 Q6JHZ5 121 aa3.58□□□□□ -1.84
CTNNA1-241ENST00000524127 DAZ4Q86SG3 579 aaKnown RBP3.58□□□□□ -1.84
CTNNA1-241ENST00000524127 SMCR5Q8TEV8 140 aa3.58□□□□□ -1.84
CTNNA1-241ENST00000524127 C2orf48Q96LS8 159 aa3.58□□□□□ -1.84
CTNNA1-241ENST00000524127 OBSCN-AS1Q96MR7 158 aa3.58□□□□□ -1.84
CTNNA1-241ENST00000524127 MDFIQ99750 246 aa3.58□□□□□ -1.84
CTNNA1-241ENST00000524127 DAZ3Q9NR90 486 aaKnown RBP3.58□□□□□ -1.84
CTNNA1-241ENST00000524127 C22orf24Q9Y442 160 aa3.58□□□□□ -1.84
CTNNA1-241ENST00000524127 H0YGX0 51 aa3.57□□□□□ -1.84
CTNNA1-241ENST00000524127 WIPF1O43516 503 aa3.57□□□□□ -1.84
CTNNA1-241ENST00000524127 FSHBP01225 129 aa3.57□□□□□ -1.84
CTNNA1-241ENST00000524127 LINC00694P0DN24 101 aa3.57□□□□□ -1.84
CTNNA1-241ENST00000524127 PSMB8P28062 276 aa3.57□□□□□ -1.84
CTNNA1-241ENST00000524127 TMEM258P61165 79 aa3.57□□□□□ -1.84
CTNNA1-241ENST00000524127 GAGE2AQ6NT46 116 aa3.57□□□□□ -1.84
CTNNA1-241ENST00000524127 CEMP1Q6PRD7 247 aaPredicted RBP3.57□□□□□ -1.84
CTNNA1-241ENST00000524127 Q6ZSV7 163 aa3.57□□□□□ -1.84
CTNNA1-241ENST00000524127 OR13C6PQ8NH95 151 aa3.57□□□□□ -1.84
CTNNA1-241ENST00000524127 DEFB104AQ8WTQ1 72 aa3.57□□□□□ -1.84
CTNNA1-241ENST00000524127 ZNF625Q96I27 306 aaPredicted RBP3.57□□□□□ -1.84
CTNNA1-241ENST00000524127 DUX5Q96PT3 197 aa3.57□□□□□ -1.84
CTNNA1-241ENST00000524127 KRTAP9-2Q9BYQ4 174 aa3.57□□□□□ -1.84
CTNNA1-241ENST00000524127 CDKN2A-AS1Q9UH64 79 aa3.57□□□□□ -1.84
CTNNA1-241ENST00000524127 LINC00527Q9UJ94 153 aa3.57□□□□□ -1.84
CTNNA1-241ENST00000524127 VWFP04275 2813 aa3.57□□□□□ -1.84
CTNNA1-241ENST00000524127 PKD1L1Q8TDX9 2849 aa3.57□□□□□ -1.84
CTNNA1-241ENST00000524127 IGKV3-7A0A075B6H7 116 aa3.56□□□□□ -1.84
CTNNA1-241ENST00000524127 TRAV12-2A0A075B6T6 113 aa3.56□□□□□ -1.84
CTNNA1-241ENST00000524127 IGHV3OR16-12A0A075B7B8 117 aa3.56□□□□□ -1.84
CTNNA1-241ENST00000524127 IGHV3OR16-10A0A075B7F0 116 aa3.56□□□□□ -1.84
CTNNA1-241ENST00000524127 KRTAP9-6A0A140TA67 174 aa3.56□□□□□ -1.84
CTNNA1-241ENST00000524127 SMIM1B2RUZ4 78 aa3.56□□□□□ -1.84
CTNNA1-241ENST00000524127 MALP21145 153 aa3.56□□□□□ -1.84
CTNNA1-241ENST00000524127 RPL18AQ02543 176 aaKnown RBP3.56□□□□□ -1.84
CTNNA1-241ENST00000524127 SPINK13Q1W4C9 94 aa3.56□□□□□ -1.84
CTNNA1-241ENST00000524127 KRTAP21-3Q3LHN1 58 aa3.56□□□□□ -1.84
CTNNA1-241ENST00000524127 LINC00242Q5T6M2 205 aa3.56□□□□□ -1.84
CTNNA1-241ENST00000524127 HIST2H2BDQ6DRA6 164 aa3.56□□□□□ -1.84
CTNNA1-241ENST00000524127 LINC01356Q8N9X3 169 aa3.56□□□□□ -1.84
CTNNA1-241ENST00000524127 Q9H8V8 135 aa3.56□□□□□ -1.84
CTNNA1-241ENST00000524127 MGAM2Q2M2H8 2515 aa3.56□□□□□ -1.84
CTNNA1-241ENST00000524127 NBEAL1Q6ZS30 2694 aa3.56□□□□□ -1.84
CTNNA1-241ENST00000524127 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.55□□□□□ -1.84
CTNNA1-241ENST00000524127 TRBV10-1A0A0K0K1A3 114 aa3.55□□□□□ -1.84
CTNNA1-241ENST00000524127 IGKV2-29A2NJV5 120 aaPredicted RBP3.55□□□□□ -1.84
CTNNA1-241ENST00000524127 SMIM9A6NGZ8 99 aa3.55□□□□□ -1.84
CTNNA1-241ENST00000524127 A8MZ25 164 aa3.55□□□□□ -1.84
CTNNA1-241ENST00000524127 NDUFC2-KCTD14E9PQ53 114 aa3.55□□□□□ -1.84
CTNNA1-241ENST00000524127 H3BUX3 64 aa3.55□□□□□ -1.84
CTNNA1-241ENST00000524127 BCE1O60756 84 aa3.55□□□□□ -1.84
CTNNA1-241ENST00000524127 MSMBP08118 114 aa3.55□□□□□ -1.84
CTNNA1-241ENST00000524127 NPC2P61916 151 aa3.55□□□□□ -1.84
CTNNA1-241ENST00000524127 KRTAP24-1Q3LI83 254 aa3.55□□□□□ -1.84
CTNNA1-241ENST00000524127 S100A7L2Q5SY68 101 aa3.55□□□□□ -1.84
CTNNA1-241ENST00000524127 DGAT2L7PQ6IED9 249 aa3.55□□□□□ -1.84
CTNNA1-241ENST00000524127 SOSTDC1Q6X4U4 206 aa3.55□□□□□ -1.84
CTNNA1-241ENST00000524127 SERP2Q8N6R1 65 aa3.55□□□□□ -1.84
CTNNA1-241ENST00000524127 ESM1Q9NQ30 184 aa3.55□□□□□ -1.84
CTNNA1-241ENST00000524127 NOTCH3Q9UM47 2321 aa3.54□□□□□ -1.84
CTNNA1-241ENST00000524127 B4DSR2 109 aa3.54□□□□□ -1.84
CTNNA1-241ENST00000524127 F5H768 121 aa3.54□□□□□ -1.84
CTNNA1-241ENST00000524127 DNAL4O96015 105 aa3.54□□□□□ -1.84
CTNNA1-241ENST00000524127 CRPP02741 224 aa3.54□□□□□ -1.84
CTNNA1-241ENST00000524127 RBMY1A1P0DJD3 496 aaKnown RBP3.54□□□□□ -1.84
CTNNA1-241ENST00000524127 RBMY1CP0DJD4 496 aa3.54□□□□□ -1.84
CTNNA1-241ENST00000524127 IGHV4-38-2P0DP08 117 aa3.54□□□□□ -1.84
CTNNA1-241ENST00000524127 EDN2P20800 178 aa3.54□□□□□ -1.84
CTNNA1-241ENST00000524127 BLCAPP62952 87 aa3.54□□□□□ -1.84
CTNNA1-241ENST00000524127 RBMY1FQ15415 496 aaKnown RBP3.54□□□□□ -1.84
CTNNA1-241ENST00000524127 LY6EQ16553 131 aa3.54□□□□□ -1.84
CTNNA1-241ENST00000524127 RNASE13Q5GAN3 156 aaKnown RBP3.54□□□□□ -1.84
CTNNA1-241ENST00000524127 ATP5EP2Q5VTU8 51 aa3.54□□□□□ -1.84
CTNNA1-241ENST00000524127 Q6ZSN1 163 aa3.54□□□□□ -1.84
CTNNA1-241ENST00000524127 FAM19A5Q7Z5A7 132 aaPredicted RBP3.54□□□□□ -1.84
CTNNA1-241ENST00000524127 Q8N2B8 174 aa3.54□□□□□ -1.84
CTNNA1-241ENST00000524127 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.54□□□□□ -1.84
CTNNA1-241ENST00000524127 C11orf72Q8NBR9 251 aa3.54□□□□□ -1.84
CTNNA1-241ENST00000524127 UPK3BQ9BT76 320 aa3.54□□□□□ -1.84
CTNNA1-241ENST00000524127 KLK5Q9Y337 293 aaPredicted RBP3.54□□□□□ -1.84
CTNNA1-241ENST00000524127 DNAH9Q9NYC9 4486 aa3.54□□□□□ -1.84
CTNNA1-241ENST00000524127 TRBV10-3A0A0K0K1G6 114 aa3.53□□□□□ -1.84
CTNNA1-241ENST00000524127 INSP01308 110 aa3.53□□□□□ -1.84
CTNNA1-241ENST00000524127 IGKV3-20P01619 116 aa3.53□□□□□ -1.84
CTNNA1-241ENST00000524127 PROK1P58294 105 aa3.53□□□□□ -1.84
CTNNA1-241ENST00000524127 COX6A2Q02221 97 aa3.53□□□□□ -1.84
CTNNA1-241ENST00000524127 BRD3OSQ6XYD6 125 aa3.53□□□□□ -1.84
CTNNA1-241ENST00000524127 IL17DQ8TAD2 202 aa3.53□□□□□ -1.84
CTNNA1-241ENST00000524127 UBE2E2Q96LR5 201 aa3.53□□□□□ -1.84
CTNNA1-241ENST00000524127 FAM218AQ96MZ4 157 aa3.53□□□□□ -1.84
CTNNA1-241ENST00000524127 LINC00167Q96N53 147 aa3.53□□□□□ -1.84
CTNNA1-241ENST00000524127 CDC42SE2Q9NRR3 84 aa3.53□□□□□ -1.84
CTNNA1-241ENST00000524127 NOTCH1P46531 2555 aa3.53□□□□□ -1.85
CTNNA1-241ENST00000524127 IGHV3-73A0A0B4J1V6 119 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 163.2 ms