RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 ZNF345Q14585 488 aa3.8□□□□□ -1.8
PABPC1-220ENST00000522658 PHF5AQ7RTV0 110 aaKnown RBP3.8□□□□□ -1.8
PABPC1-220ENST00000522658 FAM19A5Q7Z5A7 132 aaPredicted RBP3.8□□□□□ -1.8
PABPC1-220ENST00000522658 IMMP2LQ96T52 175 aa3.8□□□□□ -1.8
PABPC1-220ENST00000522658 A0A1W2PNN7 141 aa3.79□□□□□ -1.8
PABPC1-220ENST00000522658 RAB19A4D1S5 217 aa3.79□□□□□ -1.8
PABPC1-220ENST00000522658 TAGLN2P37802 199 aaKnown RBP3.79□□□□□ -1.8
PABPC1-220ENST00000522658 KRTAP5-1Q6L8H4 278 aa3.79□□□□□ -1.8
PABPC1-220ENST00000522658 C9orf62Q8N4C0 152 aa3.79□□□□□ -1.8
PABPC1-220ENST00000522658 NUP35Q8NFH5 326 aa3.79□□□□□ -1.8
PABPC1-220ENST00000522658 OR10D4PQ8NGN7 298 aa3.79□□□□□ -1.8
PABPC1-220ENST00000522658 ORAOV1Q8WV07 137 aa3.79□□□□□ -1.8
PABPC1-220ENST00000522658 C2orf48Q96LS8 159 aa3.79□□□□□ -1.8
PABPC1-220ENST00000522658 KIR2DL4Q99706 377 aa3.79□□□□□ -1.8
PABPC1-220ENST00000522658 CYTL1Q9NRR1 136 aa3.79□□□□□ -1.8
PABPC1-220ENST00000522658 A8MWL6 223 aa3.78□□□□□ -1.8
PABPC1-220ENST00000522658 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.78□□□□□ -1.8
PABPC1-220ENST00000522658 M0QXV9 152 aa3.78□□□□□ -1.8
PABPC1-220ENST00000522658 GATCO43716 136 aaKnown RBP3.78□□□□□ -1.8
PABPC1-220ENST00000522658 PPP1R17O96001 155 aa3.78□□□□□ -1.8
PABPC1-220ENST00000522658 ESDP10768 282 aa3.78□□□□□ -1.8
PABPC1-220ENST00000522658 C5orf38Q86SI9 138 aa3.78□□□□□ -1.8
PABPC1-220ENST00000522658 MRPL52Q86TS9 123 aaKnown RBP3.78□□□□□ -1.8
PABPC1-220ENST00000522658 OPRPNQ99935 248 aaPredicted RBP3.78□□□□□ -1.8
PABPC1-220ENST00000522658 RNASE7Q9H1E1 156 aaKnown RBP3.78□□□□□ -1.8
PABPC1-220ENST00000522658 CDC42SE2Q9NRR3 84 aa3.78□□□□□ -1.8
PABPC1-220ENST00000522658 TRBV20OR9-2A0A075B6H5 130 aa3.77□□□□□ -1.81
PABPC1-220ENST00000522658 IFITM10A6NMD0 228 aa3.77□□□□□ -1.81
PABPC1-220ENST00000522658 F8WDY8 70 aa3.77□□□□□ -1.81
PABPC1-220ENST00000522658 PPP1R2P9O14990 202 aa3.77□□□□□ -1.81
PABPC1-220ENST00000522658 TSHBP01222 138 aa3.77□□□□□ -1.81
PABPC1-220ENST00000522658 CEBPGP53567 150 aa3.77□□□□□ -1.81
PABPC1-220ENST00000522658 KRTAP10-5P60370 271 aa3.77□□□□□ -1.81
PABPC1-220ENST00000522658 GAGE2EQ4V326 116 aa3.77□□□□□ -1.81
PABPC1-220ENST00000522658 RNASE13Q5GAN3 156 aaKnown RBP3.77□□□□□ -1.81
PABPC1-220ENST00000522658 PACRGQ96M98 296 aaPredicted RBP3.77□□□□□ -1.81
PABPC1-220ENST00000522658 CNFNQ9BYD5 112 aa3.77□□□□□ -1.81
PABPC1-220ENST00000522658 GAGE2DQ9UEU5 116 aa3.77□□□□□ -1.81
PABPC1-220ENST00000522658 TGIF2-C20orf24A0A0A6YYL0 155 aa3.76□□□□□ -1.81
PABPC1-220ENST00000522658 TRBV6-5A0A0K0K1A5 114 aa3.76□□□□□ -1.81
PABPC1-220ENST00000522658 G3V3Q6 166 aa3.76□□□□□ -1.81
PABPC1-220ENST00000522658 SMLR1H3BR10 107 aa3.76□□□□□ -1.81
PABPC1-220ENST00000522658 VCYO14598 125 aa3.76□□□□□ -1.81
PABPC1-220ENST00000522658 TCAPO15273 167 aa3.76□□□□□ -1.81
PABPC1-220ENST00000522658 TSPAN13O95857 204 aa3.76□□□□□ -1.81
PABPC1-220ENST00000522658 MRPL35Q9NZE8 188 aaKnown RBP3.76□□□□□ -1.81
PABPC1-220ENST00000522658 A0A1B0GUT8 65 aa3.75□□□□□ -1.81
PABPC1-220ENST00000522658 HBBP68871 147 aa3.75□□□□□ -1.81
PABPC1-220ENST00000522658 TMEM241Q24JQ0 296 aa3.75□□□□□ -1.81
PABPC1-220ENST00000522658 RGS21Q2M5E4 152 aa3.75□□□□□ -1.81
PABPC1-220ENST00000522658 Q6ZUT4 128 aa3.75□□□□□ -1.81
PABPC1-220ENST00000522658 CARHSP1Q9Y2V2 147 aaKnown RBP3.75□□□□□ -1.81
PABPC1-220ENST00000522658 LPAP08519 4548 aa3.74□□□□□ -1.81
PABPC1-220ENST00000522658 TRBV27A0A0K0K1C4 114 aa3.74□□□□□ -1.81
PABPC1-220ENST00000522658 HMSDA8MTL9 139 aa3.74□□□□□ -1.81
PABPC1-220ENST00000522658 NUPR1O60356 82 aa3.74□□□□□ -1.81
PABPC1-220ENST00000522658 PRSS2P07478 247 aa3.74□□□□□ -1.81
PABPC1-220ENST00000522658 FOXA3P55318 350 aaPredicted RBP3.74□□□□□ -1.81
PABPC1-220ENST00000522658 RIGQ13278 110 aa3.74□□□□□ -1.81
PABPC1-220ENST00000522658 TYMSOSQ8TAI1 123 aa3.74□□□□□ -1.81
PABPC1-220ENST00000522658 TMEM191AQ9H0A3 160 aa3.74□□□□□ -1.81
PABPC1-220ENST00000522658 SMDT1Q9H4I9 107 aa3.74□□□□□ -1.81
PABPC1-220ENST00000522658 UBE2D4Q9Y2X8 147 aa3.74□□□□□ -1.81
PABPC1-220ENST00000522658 CSDC2Q9Y534 153 aaKnown RBP3.74□□□□□ -1.81
PABPC1-220ENST00000522658 FAM168BA1KXE4 195 aa3.73□□□□□ -1.81
PABPC1-220ENST00000522658 HIGD1CA8MV81 97 aa3.73□□□□□ -1.81
PABPC1-220ENST00000522658 K7EN84 100 aa3.73□□□□□ -1.81
PABPC1-220ENST00000522658 AMN1Q8IY45 258 aa3.73□□□□□ -1.81
PABPC1-220ENST00000522658 SPANXA1Q9NS26 97 aa3.73□□□□□ -1.81
PABPC1-220ENST00000522658 TRBV30A0A0K0K1B3 111 aa3.72□□□□□ -1.81
PABPC1-220ENST00000522658 NDUFC2-KCTD14E9PQ53 114 aa3.72□□□□□ -1.81
PABPC1-220ENST00000522658 SMKR1H3BMG3 65 aa3.72□□□□□ -1.81
PABPC1-220ENST00000522658 ZNF861PO60384 105 aa3.72□□□□□ -1.81
PABPC1-220ENST00000522658 TLX1NBP0CAT3 122 aa3.72□□□□□ -1.81
PABPC1-220ENST00000522658 CRYGAP11844 174 aa3.72□□□□□ -1.81
PABPC1-220ENST00000522658 IFI27P40305 119 aaPredicted RBP3.72□□□□□ -1.81
PABPC1-220ENST00000522658 RPL28P46779 137 aaKnown RBP3.72□□□□□ -1.81
PABPC1-220ENST00000522658 POLR2KP53803 58 aaKnown RBP3.72□□□□□ -1.81
PABPC1-220ENST00000522658 CKS1BP61024 79 aa3.72□□□□□ -1.81
PABPC1-220ENST00000522658 LBHQ53QV2 105 aaPredicted RBP3.72□□□□□ -1.81
PABPC1-220ENST00000522658 FAM231DQ6ZW35 169 aa3.72□□□□□ -1.81
PABPC1-220ENST00000522658 OCC1Q8TAD7 63 aa3.72□□□□□ -1.81
PABPC1-220ENST00000522658 C2orf88Q9BSF0 95 aa3.72□□□□□ -1.81
PABPC1-220ENST00000522658 TIMM21Q9BVV7 248 aa3.72□□□□□ -1.81
PABPC1-220ENST00000522658 BATF3Q9NR55 127 aa3.72□□□□□ -1.81
PABPC1-220ENST00000522658 TMEM250H0YL14 139 aa3.71□□□□□ -1.82
PABPC1-220ENST00000522658 PRYO14603 147 aa3.71□□□□□ -1.82
PABPC1-220ENST00000522658 KRTAP1-4P0C5Y4 121 aa3.71□□□□□ -1.82
PABPC1-220ENST00000522658 RAB4AP20338 218 aa3.71□□□□□ -1.82
PABPC1-220ENST00000522658 RAB5AP20339 215 aa3.71□□□□□ -1.82
PABPC1-220ENST00000522658 UNQ6190/PRO20217Q6UXQ8 127 aa3.71□□□□□ -1.82
PABPC1-220ENST00000522658 Q6ZN92 141 aa3.71□□□□□ -1.82
PABPC1-220ENST00000522658 SMIM7Q9BQ49 75 aa3.71□□□□□ -1.82
PABPC1-220ENST00000522658 TOMM7Q9P0U1 55 aa3.71□□□□□ -1.82
PABPC1-220ENST00000522658 C6orf48Q9UBA6 75 aa3.71□□□□□ -1.82
PABPC1-220ENST00000522658 PRSS47A8MTI9 375 aa3.7□□□□□ -1.82
PABPC1-220ENST00000522658 S100A8P05109 93 aa3.7□□□□□ -1.82
PABPC1-220ENST00000522658 CKS2P33552 79 aa3.7□□□□□ -1.82
PABPC1-220ENST00000522658 UBE2AP49459 152 aa3.7□□□□□ -1.82
PABPC1-220ENST00000522658 RPL39P62891 51 aaKnown RBP3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 149.8 ms