RNA–Protein interactions for RNA: ENST00000521425.5

TRAM1-205, Transcript of translocation associated membrane protein 1, humanhuman

TSL 2 BASIC

Gene TRAM1, Length 3,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-205ENST00000521425 HRCT1Q6UXD1 115 aa12.64□□□□□ -0.39
TRAM1-205ENST00000521425 OR13C6PQ8NH95 151 aa12.64□□□□□ -0.39
TRAM1-205ENST00000521425 TRAV12-1A0A0B4J245 112 aa12.63□□□□□ -0.39
TRAM1-205ENST00000521425 TRIAP1O43715 76 aa12.63□□□□□ -0.39
TRAM1-205ENST00000521425 C4orf3Q8WVX3 66 aa12.63□□□□□ -0.39
TRAM1-205ENST00000521425 TIMM21Q9BVV7 248 aa12.63□□□□□ -0.39
TRAM1-205ENST00000521425 TRBV10-2A0A0K0K1G8 114 aa12.63□□□□□ -0.39
TRAM1-205ENST00000521425 TRAV25A0A0B4J276 109 aa12.62□□□□□ -0.39
TRAM1-205ENST00000521425 C3orf22Q8N5N4 141 aa12.62□□□□□ -0.39
TRAM1-205ENST00000521425 TRGV4A0A0C4DH28 118 aa12.62□□□□□ -0.39
TRAM1-205ENST00000521425 TMEM141Q96I45 108 aa12.62□□□□□ -0.39
TRAM1-205ENST00000521425 KRTAP1-3Q8IUG1 177 aa12.61□□□□□ -0.39
TRAM1-205ENST00000521425 SLC25A29Q8N8R3 303 aa12.61□□□□□ -0.39
TRAM1-205ENST00000521425 KIR2DL5BQ8NHK3 375 aa12.61□□□□□ -0.39
TRAM1-205ENST00000521425 POM121L12Q8N7R1 296 aa12.61□□□□□ -0.39
TRAM1-205ENST00000521425 CDKN2A-AS1Q9UH64 79 aa12.61□□□□□ -0.39
TRAM1-205ENST00000521425 PKD1L1Q8TDX9 2849 aa12.6□□□□□ -0.39
TRAM1-205ENST00000521425 TMEM89A2RUT3 159 aa12.6□□□□□ -0.39
TRAM1-205ENST00000521425 F5H768 121 aa12.6□□□□□ -0.39
TRAM1-205ENST00000521425 EIF4EBP3O60516 100 aaPredicted RBP12.6□□□□□ -0.39
TRAM1-205ENST00000521425 H7C423 109 aa12.6□□□□□ -0.39
TRAM1-205ENST00000521425 IGHV3-30-3P0DP02 117 aa12.6□□□□□ -0.39
TRAM1-205ENST00000521425 C4orf26Q17RF5 130 aa12.6□□□□□ -0.39
TRAM1-205ENST00000521425 C1orf158Q8N1D5 194 aa12.6□□□□□ -0.39
TRAM1-205ENST00000521425 J3QKU1 62 aa12.59□□□□□ -0.39
TRAM1-205ENST00000521425 DSCR8Q96T75 97 aa12.59□□□□□ -0.39
TRAM1-205ENST00000521425 NDUFA12Q9UI09 145 aa12.59□□□□□ -0.39
TRAM1-205ENST00000521425 MED14OSP0DP75 135 aa12.58□□□□□ -0.39
TRAM1-205ENST00000521425 SPATA3Q8NHX4 192 aa12.58□□□□□ -0.39
TRAM1-205ENST00000521425 COX6CP09669 75 aa12.58□□□□□ -0.4
TRAM1-205ENST00000521425 TMEM263Q8WUH6 116 aaKnown RBP12.58□□□□□ -0.4
TRAM1-205ENST00000521425 INAFM1C9JVW0 142 aa12.57□□□□□ -0.4
TRAM1-205ENST00000521425 UBE2L6O14933 153 aa12.57□□□□□ -0.4
TRAM1-205ENST00000521425 SPANXA1Q9NS26 97 aa12.57□□□□□ -0.4
TRAM1-205ENST00000521425 LINC01546A6NGU7 62 aa12.56□□□□□ -0.4
TRAM1-205ENST00000521425 TIMM17AQ99595 171 aa12.56□□□□□ -0.4
TRAM1-205ENST00000521425 COX6A2Q02221 97 aa12.55□□□□□ -0.4
TRAM1-205ENST00000521425 NXPH4O95158 308 aa12.55□□□□□ -0.4
TRAM1-205ENST00000521425 RNF152Q8N8N0 203 aa12.55□□□□□ -0.4
TRAM1-205ENST00000521425 UQCRQO14949 82 aa12.55□□□□□ -0.4
TRAM1-205ENST00000521425 FSHBP01225 129 aa12.54□□□□□ -0.4
TRAM1-205ENST00000521425 PAPPA-AS1Q5QFB9 102 aa12.54□□□□□ -0.4
TRAM1-205ENST00000521425 ADAMTSL4-AS1Q5T5F5 129 aa12.54□□□□□ -0.4
TRAM1-205ENST00000521425 RHOHQ15669 191 aa12.54□□□□□ -0.4
TRAM1-205ENST00000521425 RPL36AP83881 106 aaKnown RBP12.53□□□□□ -0.4
TRAM1-205ENST00000521425 RPL36ALQ969Q0 106 aaKnown RBP12.53□□□□□ -0.4
TRAM1-205ENST00000521425 ICOSQ9Y6W8 199 aa12.53□□□□□ -0.4
TRAM1-205ENST00000521425 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.52□□□□□ -0.41
TRAM1-205ENST00000521425 Q9H8V8 135 aa12.52□□□□□ -0.41
TRAM1-205ENST00000521425 C5orf38Q86SI9 138 aa12.52□□□□□ -0.41
TRAM1-205ENST00000521425 A0A0J9YXY3 114 aa12.51□□□□□ -0.41
TRAM1-205ENST00000521425 TMEM223A0PJW6 202 aa12.51□□□□□ -0.41
TRAM1-205ENST00000521425 IGLV10-54A0A075B6I4 117 aa12.51□□□□□ -0.41
TRAM1-205ENST00000521425 C11orf72Q8NBR9 251 aa12.51□□□□□ -0.41
TRAM1-205ENST00000521425 CYSTM1Q9H1C7 97 aa12.51□□□□□ -0.41
TRAM1-205ENST00000521425 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.5□□□□□ -0.41
TRAM1-205ENST00000521425 TRACP01848 142 aa12.5□□□□□ -0.41
TRAM1-205ENST00000521425 PFN2P35080 140 aa12.5□□□□□ -0.41
TRAM1-205ENST00000521425 DEFB135Q30KP9 77 aa12.5□□□□□ -0.41
TRAM1-205ENST00000521425 LRRC75A-AS1Q8N1F1 130 aa12.5□□□□□ -0.41
TRAM1-205ENST00000521425 PRIMA1Q86XR5 153 aa12.5□□□□□ -0.41
TRAM1-205ENST00000521425 CHCHD7Q9BUK0 85 aa12.5□□□□□ -0.41
TRAM1-205ENST00000521425 TRBV6-5A0A0K0K1A5 114 aa12.49□□□□□ -0.41
TRAM1-205ENST00000521425 IGKV3D-7A0A0C4DH55 119 aa12.49□□□□□ -0.41
TRAM1-205ENST00000521425 SMCR5Q8TEV8 140 aa12.49□□□□□ -0.41
TRAM1-205ENST00000521425 LINC00526Q96FQ7 95 aa12.48□□□□□ -0.41
TRAM1-205ENST00000521425 UBE2D4Q9Y2X8 147 aa12.48□□□□□ -0.41
TRAM1-205ENST00000521425 C1orf43Q9BWL3 253 aa12.48□□□□□ -0.41
TRAM1-205ENST00000521425 SDIM1Q6ZPB5 146 aa12.47□□□□□ -0.41
TRAM1-205ENST00000521425 LEPROTO15243 131 aa12.47□□□□□ -0.41
TRAM1-205ENST00000521425 LY6G6DO95868 133 aa12.47□□□□□ -0.41
TRAM1-205ENST00000521425 PKIGQ9Y2B9 76 aa12.47□□□□□ -0.41
TRAM1-205ENST00000521425 TRBV7-7A0A0K0K1E9 115 aa12.46□□□□□ -0.41
TRAM1-205ENST00000521425 A0A1B0GX51 115 aa12.46□□□□□ -0.41
TRAM1-205ENST00000521425 A0A0B4J2C4 111 aa12.46□□□□□ -0.42
TRAM1-205ENST00000521425 PIK3CD-AS1Q5SR53 167 aa12.46□□□□□ -0.42
TRAM1-205ENST00000521425 COX7CP15954 63 aa12.45□□□□□ -0.42
TRAM1-205ENST00000521425 XCL1P47992 114 aa12.45□□□□□ -0.42
TRAM1-205ENST00000521425 NTM-AS1Q6ZSK4 140 aa12.45□□□□□ -0.42
TRAM1-205ENST00000521425 K7EQD1 137 aa12.44□□□□□ -0.42
TRAM1-205ENST00000521425 RNASE1P07998 156 aaKnown RBP12.44□□□□□ -0.42
TRAM1-205ENST00000521425 H3BT86 120 aa12.44□□□□□ -0.42
TRAM1-205ENST00000521425 Q8N3U1 123 aa12.43□□□□□ -0.42
TRAM1-205ENST00000521425 TRBV30A0A0K0K1B3 111 aa12.43□□□□□ -0.42
TRAM1-205ENST00000521425 A0A087WVE0 104 aa12.43□□□□□ -0.42
TRAM1-205ENST00000521425 BAHCC1Q9P281 2608 aa12.42□□□□□ -0.42
TRAM1-205ENST00000521425 AMELXQ99217 191 aa12.42□□□□□ -0.42
TRAM1-205ENST00000521425 IGHV1-58A0A0C4DH39 117 aa12.41□□□□□ -0.42
TRAM1-205ENST00000521425 IGLV4-60A0A075B6I1 120 aa12.41□□□□□ -0.42
TRAM1-205ENST00000521425 FAM104AQ969W3 186 aa12.41□□□□□ -0.42
TRAM1-205ENST00000521425 LINC00158P58513 81 aa12.41□□□□□ -0.42
TRAM1-205ENST00000521425 KRTAP1-1Q07627 177 aa12.41□□□□□ -0.42
TRAM1-205ENST00000521425 CIRBPQ14011 172 aaKnown RBP12.41□□□□□ -0.42
TRAM1-205ENST00000521425 VSIG2Q96IQ7 327 aa12.41□□□□□ -0.42
TRAM1-205ENST00000521425 GYPEP15421 78 aa12.4□□□□□ -0.42
TRAM1-205ENST00000521425 LINC00643Q86TS7 51 aa12.4□□□□□ -0.42
TRAM1-205ENST00000521425 Q9HAA7 133 aa12.4□□□□□ -0.42
TRAM1-205ENST00000521425 KRTAP10-3P60369 221 aa12.4□□□□□ -0.42
TRAM1-205ENST00000521425 Q8N2B8 174 aa12.39□□□□□ -0.43
TRAM1-205ENST00000521425 GIG44P09565 113 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms