RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 NEXMIFQ5QGS0 1516 aa1.37□□□□□ -2.19
SQLE-204ENST00000520493 NCOA6Q14686 2063 aaPredicted RBP1.37□□□□□ -2.19
SQLE-204ENST00000520493 ZC3H13Q5T200 1668 aaKnown RBP1.37□□□□□ -2.19
SQLE-204ENST00000520493 QRICH2Q9H0J4 1663 aa1.37□□□□□ -2.19
SQLE-204ENST00000520493 SNCGO76070 127 aa1.37□□□□□ -2.19
SQLE-204ENST00000520493 Q56UQ5 140 aa1.37□□□□□ -2.19
SQLE-204ENST00000520493 C9orf116Q5BN46 136 aaPredicted RBP1.37□□□□□ -2.19
SQLE-204ENST00000520493 PRRC2BQ5JSZ5 2229 aaKnown RBP1.37□□□□□ -2.19
SQLE-204ENST00000520493 ATMQ13315 3056 aa1.37□□□□□ -2.19
SQLE-204ENST00000520493 DIP2CQ9Y2E4 1556 aa1.37□□□□□ -2.19
SQLE-204ENST00000520493 DMBT1Q9UGM3 2413 aaPredicted RBP1.37□□□□□ -2.19
SQLE-204ENST00000520493 SVEP1Q4LDE5 3571 aa1.37□□□□□ -2.19
SQLE-204ENST00000520493 ATP7BP35670 1465 aa1.37□□□□□ -2.19
SQLE-204ENST00000520493 TULP4Q9NRJ4 1543 aa1.36□□□□□ -2.19
SQLE-204ENST00000520493 MROH2AA6NES4 1674 aa1.36□□□□□ -2.19
SQLE-204ENST00000520493 PREX1Q8TCU6 1659 aa1.36□□□□□ -2.19
SQLE-204ENST00000520493 NBDYA0A0U1RRE5 68 aa1.36□□□□□ -2.19
SQLE-204ENST00000520493 LOC101927531A0A1B0GV80 90 aa1.36□□□□□ -2.19
SQLE-204ENST00000520493 SPAARA0A1B0GVQ0 90 aa1.36□□□□□ -2.19
SQLE-204ENST00000520493 MCRIP1C9JLW8 97 aa1.36□□□□□ -2.19
SQLE-204ENST00000520493 EFNA4P52798 201 aa1.36□□□□□ -2.19
SQLE-204ENST00000520493 CPSF1Q10570 1443 aaKnown RBP1.36□□□□□ -2.19
SQLE-204ENST00000520493 FXYD3Q14802 87 aa1.36□□□□□ -2.19
SQLE-204ENST00000520493 EDC4Q6P2E9 1401 aaKnown RBP1.36□□□□□ -2.19
SQLE-204ENST00000520493 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.36□□□□□ -2.19
SQLE-204ENST00000520493 PPIP5K1Q6PFW1 1433 aa1.36□□□□□ -2.19
SQLE-204ENST00000520493 Q6ZQY7 126 aa1.36□□□□□ -2.19
SQLE-204ENST00000520493 IFI27L1Q96BM0 104 aa1.36□□□□□ -2.19
SQLE-204ENST00000520493 SPANXDQ9BXN6 97 aa1.36□□□□□ -2.19
SQLE-204ENST00000520493 MUC22E2RYF6 1773 aaPredicted RBP1.36□□□□□ -2.19
SQLE-204ENST00000520493 CD163L1Q9NR16 1453 aa1.36□□□□□ -2.19
SQLE-204ENST00000520493 AFDNP55196 1824 aaKnown RBP1.36□□□□□ -2.19
SQLE-204ENST00000520493 COL4A6Q14031 1691 aa1.35□□□□□ -2.19
SQLE-204ENST00000520493 SHPRHQ149N8 1683 aa1.35□□□□□ -2.19
SQLE-204ENST00000520493 RREB1Q92766 1687 aa1.35□□□□□ -2.19
SQLE-204ENST00000520493 RICTORQ6R327 1708 aa1.35□□□□□ -2.19
SQLE-204ENST00000520493 ANKRD26Q9UPS8 1709 aa1.35□□□□□ -2.19
SQLE-204ENST00000520493 ASCC3Q8N3C0 2202 aaKnown RBP1.35□□□□□ -2.19
SQLE-204ENST00000520493 CDC42BPGQ6DT37 1551 aa1.35□□□□□ -2.19
SQLE-204ENST00000520493 DSTQ03001 7570 aaKnown RBP1.35□□□□□ -2.19
SQLE-204ENST00000520493 A6NIN4 97 aa1.35□□□□□ -2.19
SQLE-204ENST00000520493 TNFP01375 233 aa1.35□□□□□ -2.19
SQLE-204ENST00000520493 IFNA17P01571 189 aa1.35□□□□□ -2.19
SQLE-204ENST00000520493 CBLN1P23435 193 aa1.35□□□□□ -2.19
SQLE-204ENST00000520493 GNG4P50150 75 aa1.35□□□□□ -2.19
SQLE-204ENST00000520493 RPL7L1Q6DKI1 246 aaKnown RBP1.35□□□□□ -2.19
SQLE-204ENST00000520493 Q6ZS92 163 aa1.35□□□□□ -2.19
SQLE-204ENST00000520493 C5orf56Q8N8D9 126 aa1.35□□□□□ -2.19
SQLE-204ENST00000520493 TSKUQ8WUA8 353 aa1.35□□□□□ -2.19
SQLE-204ENST00000520493 LSM10Q969L4 123 aaKnown RBP1.35□□□□□ -2.19
SQLE-204ENST00000520493 RPRMQ9NS64 109 aa1.35□□□□□ -2.19
SQLE-204ENST00000520493 DMDP11532 3685 aa1.35□□□□□ -2.19
SQLE-204ENST00000520493 NLRP1Q9C000 1473 aa1.35□□□□□ -2.19
SQLE-204ENST00000520493 CITO14578 2027 aa1.35□□□□□ -2.19
SQLE-204ENST00000520493 CLTCQ00610 1675 aaKnown RBP1.35□□□□□ -2.19
SQLE-204ENST00000520493 COL7A1Q02388 2944 aa1.35□□□□□ -2.19
SQLE-204ENST00000520493 DCHS2Q6V1P9 2916 aa1.35□□□□□ -2.19
SQLE-204ENST00000520493 ADGRG4Q8IZF6 3080 aa1.34□□□□□ -2.19
SQLE-204ENST00000520493 CENPEQ02224 2701 aa1.34□□□□□ -2.19
SQLE-204ENST00000520493 MAP2P11137 1827 aaKnown RBP1.34□□□□□ -2.19
SQLE-204ENST00000520493 KIF20BQ96Q89 1820 aa1.34□□□□□ -2.19
SQLE-204ENST00000520493 KIAA0100Q14667 2235 aaKnown RBP1.34□□□□□ -2.19
SQLE-204ENST00000520493 ACANP16112 2415 aa1.34□□□□□ -2.19
SQLE-204ENST00000520493 TRAV12-3A0A0B4J271 114 aa1.34□□□□□ -2.19
SQLE-204ENST00000520493 PIGBOS1A0A0B4J2F0 54 aa1.34□□□□□ -2.19
SQLE-204ENST00000520493 APOC4-APOC2K7ER74 178 aa1.34□□□□□ -2.19
SQLE-204ENST00000520493 APOC2P02655 101 aa1.34□□□□□ -2.19
SQLE-204ENST00000520493 CAV3P56539 151 aa1.34□□□□□ -2.19
SQLE-204ENST00000520493 C10orf99Q6UWK7 81 aa1.34□□□□□ -2.19
SQLE-204ENST00000520493 IER3IP1Q9Y5U9 82 aa1.34□□□□□ -2.19
SQLE-204ENST00000520493 ANKARQ7Z5J8 1434 aa1.33□□□□□ -2.2
SQLE-204ENST00000520493 ITSN1Q15811 1721 aa1.33□□□□□ -2.2
SQLE-204ENST00000520493 KNDC1Q76NI1 1749 aa1.33□□□□□ -2.2
SQLE-204ENST00000520493 TCRBV3S1A0A5B6 114 aa1.33□□□□□ -2.2
SQLE-204ENST00000520493 TFF1P04155 84 aa1.33□□□□□ -2.2
SQLE-204ENST00000520493 TPPP2P59282 170 aa1.33□□□□□ -2.2
SQLE-204ENST00000520493 UBE2G1P62253 170 aa1.33□□□□□ -2.2
SQLE-204ENST00000520493 CYP2G1PQ6ZSU1 146 aa1.33□□□□□ -2.2
SQLE-204ENST00000520493 PPP1R1CQ8WVI7 109 aa1.33□□□□□ -2.2
SQLE-204ENST00000520493 CCL19Q99731 98 aa1.33□□□□□ -2.2
SQLE-204ENST00000520493 TCEAL7Q9BRU2 100 aa1.33□□□□□ -2.2
SQLE-204ENST00000520493 AKAP12Q02952 1782 aa1.33□□□□□ -2.2
SQLE-204ENST00000520493 VPS13CQ709C8 3753 aa1.33□□□□□ -2.2
SQLE-204ENST00000520493 PTPRQQ9UMZ3 2332 aa1.33□□□□□ -2.2
SQLE-204ENST00000520493 SPTBP11277 2137 aa1.33□□□□□ -2.2
SQLE-204ENST00000520493 PLXNA1Q9UIW2 1896 aa1.33□□□□□ -2.2
SQLE-204ENST00000520493 C3P01024 1663 aa1.32□□□□□ -2.2
SQLE-204ENST00000520493 MGAQ8IWI9 3026 aa1.32□□□□□ -2.2
SQLE-204ENST00000520493 MON2Q7Z3U7 1717 aa1.32□□□□□ -2.2
SQLE-204ENST00000520493 UBR1Q8IWV7 1749 aa1.32□□□□□ -2.2
SQLE-204ENST00000520493 TRBV30A0A0K0K1B3 111 aa1.32□□□□□ -2.2
SQLE-204ENST00000520493 Q8N8P6 123 aa1.32□□□□□ -2.2
SQLE-204ENST00000520493 NRXN3Q9Y4C0 1643 aa1.32□□□□□ -2.2
SQLE-204ENST00000520493 CUBNO60494 3623 aa1.32□□□□□ -2.2
SQLE-204ENST00000520493 CACNA1HO95180 2353 aa1.32□□□□□ -2.2
SQLE-204ENST00000520493 CEP170BQ9Y4F5 1589 aaPredicted RBP1.31□□□□□ -2.2
SQLE-204ENST00000520493 TRBV10-3A0A0K0K1G6 114 aa1.31□□□□□ -2.2
SQLE-204ENST00000520493 SNAPC5O75971 98 aa1.31□□□□□ -2.2
SQLE-204ENST00000520493 NPC2P61916 151 aa1.31□□□□□ -2.2
SQLE-204ENST00000520493 PPP3R1P63098 170 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms