RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 GAGE6Q13070 117 aa18.1■□□□□ 0.49
COL13A1-213ENST00000520267 ERG28Q9UKR5 140 aa18.1■□□□□ 0.49
COL13A1-213ENST00000520267 TRBV6-8A0A0A6YYG3 113 aa18.09■□□□□ 0.49
COL13A1-213ENST00000520267 TIMM17BO60830 172 aa18.09■□□□□ 0.49
COL13A1-213ENST00000520267 F5H768 121 aa18.08■□□□□ 0.48
COL13A1-213ENST00000520267 SMCPP49901 116 aaPredicted RBP18.08■□□□□ 0.48
COL13A1-213ENST00000520267 SCGB1C2P0DMR2 95 aa18.07■□□□□ 0.48
COL13A1-213ENST00000520267 Q9H8V8 135 aa18.07■□□□□ 0.48
COL13A1-213ENST00000520267 DAND5Q8N907 189 aa18.07■□□□□ 0.48
COL13A1-213ENST00000520267 TRBV20-1A0A075B6N2 111 aa18.05■□□□□ 0.48
COL13A1-213ENST00000520267 IGLV4-60A0A075B6I1 120 aa18.05■□□□□ 0.48
COL13A1-213ENST00000520267 SMIM9A6NGZ8 99 aa18.05■□□□□ 0.48
COL13A1-213ENST00000520267 ZNF625Q96I27 306 aaPredicted RBP18.05■□□□□ 0.48
COL13A1-213ENST00000520267 CITED1Q99966 193 aa18.05■□□□□ 0.48
COL13A1-213ENST00000520267 CHCHD5Q9BSY4 110 aa18.03■□□□□ 0.48
COL13A1-213ENST00000520267 HIVEP1P15822 2718 aa18.03■□□□□ 0.48
COL13A1-213ENST00000520267 TENM1Q9UKZ4 2725 aa18.03■□□□□ 0.48
COL13A1-213ENST00000520267 Q1RN00 199 aa18.02■□□□□ 0.48
COL13A1-213ENST00000520267 IGKV3OR2-268A0A0C4DH90 116 aa18.01■□□□□ 0.47
COL13A1-213ENST00000520267 GYPEP15421 78 aa18.01■□□□□ 0.47
COL13A1-213ENST00000520267 IFITM1P13164 125 aa18■□□□□ 0.47
COL13A1-213ENST00000520267 CIRBPQ14011 172 aaKnown RBP18■□□□□ 0.47
COL13A1-213ENST00000520267 DEFB135Q30KP9 77 aa18■□□□□ 0.47
COL13A1-213ENST00000520267 FAM222AQ5U5X8 452 aa18■□□□□ 0.47
COL13A1-213ENST00000520267 A0A0U1RRA0 63 aa17.98■□□□□ 0.47
COL13A1-213ENST00000520267 ATP6V0E2Q8NHE4 81 aa17.98■□□□□ 0.47
COL13A1-213ENST00000520267 RNF183Q96D59 192 aa17.98■□□□□ 0.47
COL13A1-213ENST00000520267 DEFB4AO15263 64 aa17.97■□□□□ 0.47
COL13A1-213ENST00000520267 PRIMA1Q86XR5 153 aa17.97■□□□□ 0.47
COL13A1-213ENST00000520267 NBEAL2Q6ZNJ1 2754 aa17.96■□□□□ 0.47
COL13A1-213ENST00000520267 LINC00308Q8TCZ7 52 aa17.96■□□□□ 0.47
COL13A1-213ENST00000520267 TRIAP1O43715 76 aa17.96■□□□□ 0.47
COL13A1-213ENST00000520267 PRO0255Q9UI72 69 aa17.96■□□□□ 0.47
COL13A1-213ENST00000520267 TRBV30A0A0K0K1B3 111 aa17.95■□□□□ 0.46
COL13A1-213ENST00000520267 LYRM9A8MSI8 78 aa17.94■□□□□ 0.46
COL13A1-213ENST00000520267 APOC4P55056 127 aa17.94■□□□□ 0.46
COL13A1-213ENST00000520267 MEIG1Q5JSS6 88 aa17.93■□□□□ 0.46
COL13A1-213ENST00000520267 J3QR89 54 aa17.92■□□□□ 0.46
COL13A1-213ENST00000520267 ICOSQ9Y6W8 199 aa17.92■□□□□ 0.46
COL13A1-213ENST00000520267 A0A096LPF7 62 aa17.92■□□□□ 0.46
COL13A1-213ENST00000520267 IGHV4-28A0A0C4DH34 117 aa17.92■□□□□ 0.46
COL13A1-213ENST00000520267 HERV-K104P63124 156 aa17.92■□□□□ 0.46
COL13A1-213ENST00000520267 SOSTDC1Q6X4U4 206 aa17.92■□□□□ 0.46
COL13A1-213ENST00000520267 IGHV3OR16-9A0A0B4J2B5 98 aa17.9■□□□□ 0.46
COL13A1-213ENST00000520267 COX7B2Q8TF08 81 aa17.9■□□□□ 0.46
COL13A1-213ENST00000520267 ATRQ13535 2644 aa17.9■□□□□ 0.46
COL13A1-213ENST00000520267 TEP1Q99973 2627 aaKnown RBP17.9■□□□□ 0.46
COL13A1-213ENST00000520267 PAX4O43316 350 aa17.89■□□□□ 0.46
COL13A1-213ENST00000520267 FOXI1Q12951 378 aa17.89■□□□□ 0.46
COL13A1-213ENST00000520267 WFDC9Q8NEX5 89 aa17.89■□□□□ 0.46
COL13A1-213ENST00000520267 RPL13AP40429 203 aaKnown RBP17.89■□□□□ 0.45
COL13A1-213ENST00000520267 C9JAW5 83 aa17.88■□□□□ 0.45
COL13A1-213ENST00000520267 TMEM262E9PQX1 116 aa17.88■□□□□ 0.45
COL13A1-213ENST00000520267 ATXN8Q156A1 80 aa17.88■□□□□ 0.45
COL13A1-213ENST00000520267 TOMM7Q9P0U1 55 aa17.88■□□□□ 0.45
COL13A1-213ENST00000520267 LINC00959A0A1B0GUT2 108 aa17.87■□□□□ 0.45
COL13A1-213ENST00000520267 SCGB1A1P11684 91 aa17.87■□□□□ 0.45
COL13A1-213ENST00000520267 SLC25A20O43772 301 aa17.86■□□□□ 0.45
COL13A1-213ENST00000520267 TEN1Q86WV5 123 aa17.86■□□□□ 0.45
COL13A1-213ENST00000520267 CELA1Q9UNI1 258 aa17.86■□□□□ 0.45
COL13A1-213ENST00000520267 C5orf38Q86SI9 138 aa17.85■□□□□ 0.45
COL13A1-213ENST00000520267 Q8NAQ8 132 aa17.85■□□□□ 0.45
COL13A1-213ENST00000520267 CARD19Q96LW7 228 aa17.85■□□□□ 0.45
COL13A1-213ENST00000520267 A0A087WZ39 114 aa17.84■□□□□ 0.45
COL13A1-213ENST00000520267 TRRAPQ9Y4A5 3859 aa17.84■□□□□ 0.45
COL13A1-213ENST00000520267 DAD1P61803 113 aa17.84■□□□□ 0.45
COL13A1-213ENST00000520267 LINC01620Q4KN68 170 aa17.84■□□□□ 0.45
COL13A1-213ENST00000520267 A0A1B0GUV1 79 aa17.83■□□□□ 0.45
COL13A1-213ENST00000520267 ANKRD29Q8N6D5 301 aa17.83■□□□□ 0.45
COL13A1-213ENST00000520267 COPS9Q8WXC6 57 aa17.83■□□□□ 0.44
COL13A1-213ENST00000520267 IGHV4-30-4P0DP06 118 aa17.82■□□□□ 0.44
COL13A1-213ENST00000520267 WIPF1O43516 503 aa17.82■□□□□ 0.44
COL13A1-213ENST00000520267 MIFP14174 115 aa17.82■□□□□ 0.44
COL13A1-213ENST00000520267 GAGE12HA6NDE8 117 aa17.81■□□□□ 0.44
COL13A1-213ENST00000520267 COX6CP09669 75 aa17.81■□□□□ 0.44
COL13A1-213ENST00000520267 PPDPFLQ8WWR9 84 aa17.81■□□□□ 0.44
COL13A1-213ENST00000520267 CLPSL2Q6UWE3 100 aa17.8■□□□□ 0.44
COL13A1-213ENST00000520267 CLEC2BQ92478 149 aa17.8■□□□□ 0.44
COL13A1-213ENST00000520267 M0QXV9 152 aa17.78■□□□□ 0.44
COL13A1-213ENST00000520267 XCL1P47992 114 aa17.78■□□□□ 0.44
COL13A1-213ENST00000520267 SIGMAR1Q99720 223 aa17.78■□□□□ 0.44
COL13A1-213ENST00000520267 SPATA25Q9BR10 227 aa17.78■□□□□ 0.44
COL13A1-213ENST00000520267 ATP5G1P05496 136 aa17.77■□□□□ 0.44
COL13A1-213ENST00000520267 SS18Q15532 418 aa17.77■□□□□ 0.44
COL13A1-213ENST00000520267 TRAV26-1A0A087WT03 109 aa17.77■□□□□ 0.43
COL13A1-213ENST00000520267 MIR7-3HGQ8N6C7 128 aa17.77■□□□□ 0.43
COL13A1-213ENST00000520267 TRBV10-2A0A0K0K1G8 114 aa17.75■□□□□ 0.43
COL13A1-213ENST00000520267 PPDPFQ9H3Y8 114 aa17.75■□□□□ 0.43
COL13A1-213ENST00000520267 SPART-AS1P0CW21 52 aa17.74■□□□□ 0.43
COL13A1-213ENST00000520267 Q8N3U1 123 aa17.74■□□□□ 0.43
COL13A1-213ENST00000520267 LST1O00453 97 aa17.73■□□□□ 0.43
COL13A1-213ENST00000520267 LINC00158P58513 81 aa17.73■□□□□ 0.43
COL13A1-213ENST00000520267 HTN3P15516 51 aa17.72■□□□□ 0.43
COL13A1-213ENST00000520267 LINC00269Q8N2A0 174 aa17.72■□□□□ 0.43
COL13A1-213ENST00000520267 LINC01600Q96MT4 127 aa17.72■□□□□ 0.43
COL13A1-213ENST00000520267 SHISA2Q6UWI4 295 aa17.71■□□□□ 0.43
COL13A1-213ENST00000520267 OXLD1Q5BKU9 147 aa17.7■□□□□ 0.42
COL13A1-213ENST00000520267 C11orf68Q9H3H3 251 aaKnown RBP17.7■□□□□ 0.42
COL13A1-213ENST00000520267 C6orf226Q5I0X4 101 aa17.69■□□□□ 0.42
COL13A1-213ENST00000520267 SVIPQ8NHG7 77 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms