RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 DPH3P1Q9H4G8 78 aa1.95□□□□□ -2.1
HMGB1P41-201ENST00000520234 LINC00527Q9UJ94 153 aa1.95□□□□□ -2.1
HMGB1P41-201ENST00000520234 EYSQ5T1H1 3165 aa1.95□□□□□ -2.1
HMGB1P41-201ENST00000520234 VPS13AQ96RL7 3174 aa1.95□□□□□ -2.1
HMGB1P41-201ENST00000520234 SPEGQ15772 3267 aa1.95□□□□□ -2.1
HMGB1P41-201ENST00000520234 FRYLO94915 3013 aa1.94□□□□□ -2.1
HMGB1P41-201ENST00000520234 DSPP15924 2871 aaKnown RBP1.94□□□□□ -2.1
HMGB1P41-201ENST00000520234 IGHV3-21A0A0B4J1V1 117 aa1.94□□□□□ -2.1
HMGB1P41-201ENST00000520234 IGHV1-69DA0A0B4J2H0 117 aa1.94□□□□□ -2.1
HMGB1P41-201ENST00000520234 LRCOL1A6NCL2 159 aa1.94□□□□□ -2.1
HMGB1P41-201ENST00000520234 SDHAF1A6NFY7 115 aa1.94□□□□□ -2.1
HMGB1P41-201ENST00000520234 H3BUA1 57 aa1.94□□□□□ -2.1
HMGB1P41-201ENST00000520234 H3BVH4 76 aa1.94□□□□□ -2.1
HMGB1P41-201ENST00000520234 J3QQQ9 107 aa1.94□□□□□ -2.1
HMGB1P41-201ENST00000520234 M0R381 172 aa1.94□□□□□ -2.1
HMGB1P41-201ENST00000520234 ATOX1O00244 68 aa1.94□□□□□ -2.1
HMGB1P41-201ENST00000520234 CCL21O00585 134 aa1.94□□□□□ -2.1
HMGB1P41-201ENST00000520234 POLR2KP53803 58 aaKnown RBP1.94□□□□□ -2.1
HMGB1P41-201ENST00000520234 EMP1P54849 157 aa1.94□□□□□ -2.1
HMGB1P41-201ENST00000520234 RPL18AQ02543 176 aaKnown RBP1.94□□□□□ -2.1
HMGB1P41-201ENST00000520234 ORMDL2Q53FV1 153 aa1.94□□□□□ -2.1
HMGB1P41-201ENST00000520234 C2orf82Q6UX34 121 aa1.94□□□□□ -2.1
HMGB1P41-201ENST00000520234 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.94□□□□□ -2.1
HMGB1P41-201ENST00000520234 FP248Q71RG6 208 aaPredicted RBP1.94□□□□□ -2.1
HMGB1P41-201ENST00000520234 APRG1Q8IVJ8 170 aa1.94□□□□□ -2.1
HMGB1P41-201ENST00000520234 C1orf158Q8N1D5 194 aa1.94□□□□□ -2.1
HMGB1P41-201ENST00000520234 DSCR8Q96T75 97 aa1.94□□□□□ -2.1
HMGB1P41-201ENST00000520234 ROS1P08922 2347 aa1.94□□□□□ -2.1
HMGB1P41-201ENST00000520234 CACNA1BQ00975 2339 aa1.94□□□□□ -2.1
HMGB1P41-201ENST00000520234 PCNX1Q96RV3 2341 aa1.94□□□□□ -2.1
HMGB1P41-201ENST00000520234 FREM2Q5SZK8 3169 aa1.94□□□□□ -2.1
HMGB1P41-201ENST00000520234 NCOR1O75376 2440 aa1.93□□□□□ -2.1
HMGB1P41-201ENST00000520234 POLEQ07864 2286 aa1.93□□□□□ -2.1
HMGB1P41-201ENST00000520234 ZNF292O60281 2723 aa1.93□□□□□ -2.1
HMGB1P41-201ENST00000520234 TRAV12-2A0A075B6T6 113 aa1.93□□□□□ -2.1
HMGB1P41-201ENST00000520234 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.93□□□□□ -2.1
HMGB1P41-201ENST00000520234 IGHV3-66A0A0C4DH42 116 aa1.93□□□□□ -2.1
HMGB1P41-201ENST00000520234 FAM223BA6NKX1 122 aa1.93□□□□□ -2.1
HMGB1P41-201ENST00000520234 K7EMT4 169 aa1.93□□□□□ -2.1
HMGB1P41-201ENST00000520234 NDUFA4O00483 81 aa1.93□□□□□ -2.1
HMGB1P41-201ENST00000520234 LEPROTO15243 131 aa1.93□□□□□ -2.1
HMGB1P41-201ENST00000520234 PPP1R17O96001 155 aa1.93□□□□□ -2.1
HMGB1P41-201ENST00000520234 TRACP01848 142 aa1.93□□□□□ -2.1
HMGB1P41-201ENST00000520234 APELAP0DMC3 54 aa1.93□□□□□ -2.1
HMGB1P41-201ENST00000520234 PFN2P35080 140 aa1.93□□□□□ -2.1
HMGB1P41-201ENST00000520234 Q6JHZ5 121 aa1.93□□□□□ -2.1
HMGB1P41-201ENST00000520234 LYPD5Q6UWN5 251 aa1.93□□□□□ -2.1
HMGB1P41-201ENST00000520234 MUSTN1Q8IVN3 82 aa1.93□□□□□ -2.1
HMGB1P41-201ENST00000520234 FAM223AQ8IWN6 122 aa1.93□□□□□ -2.1
HMGB1P41-201ENST00000520234 C5orf56Q8N8D9 126 aa1.93□□□□□ -2.1
HMGB1P41-201ENST00000520234 ITLN2Q8WWU7 325 aaPredicted RBP1.93□□□□□ -2.1
HMGB1P41-201ENST00000520234 EEF1AKMT3Q96AZ1 226 aa1.93□□□□□ -2.1
HMGB1P41-201ENST00000520234 USMG5Q96IX5 58 aa1.93□□□□□ -2.1
HMGB1P41-201ENST00000520234 SCGB3A1Q96QR1 104 aa1.93□□□□□ -2.1
HMGB1P41-201ENST00000520234 TIMM17AQ99595 171 aa1.93□□□□□ -2.1
HMGB1P41-201ENST00000520234 UBE2D4Q9Y2X8 147 aa1.93□□□□□ -2.1
HMGB1P41-201ENST00000520234 ICOSQ9Y6W8 199 aa1.93□□□□□ -2.1
HMGB1P41-201ENST00000520234 CACNA1HO95180 2353 aa1.93□□□□□ -2.1
HMGB1P41-201ENST00000520234 RP1L1Q8IWN7 2480 aaPredicted RBP1.93□□□□□ -2.1
HMGB1P41-201ENST00000520234 CFAP47Q6ZTR5 3102 aa1.93□□□□□ -2.1
HMGB1P41-201ENST00000520234 MED13LQ71F56 2210 aa1.93□□□□□ -2.1
HMGB1P41-201ENST00000520234 PRRC2CQ9Y520 2896 aaKnown RBP1.92□□□□□ -2.1
HMGB1P41-201ENST00000520234 MGAQ8IWI9 3026 aa1.92□□□□□ -2.1
HMGB1P41-201ENST00000520234 TPRP12270 2363 aaKnown RBP1.92□□□□□ -2.1
HMGB1P41-201ENST00000520234 IGKV2-40A0A087WW87 121 aaPredicted RBP1.92□□□□□ -2.1
HMGB1P41-201ENST00000520234 TRAV13-1A0A0B4J241 112 aa1.92□□□□□ -2.1
HMGB1P41-201ENST00000520234 TRAV26-2A0A0B4J265 109 aa1.92□□□□□ -2.1
HMGB1P41-201ENST00000520234 TRAV41A0A0B4J266 112 aa1.92□□□□□ -2.1
HMGB1P41-201ENST00000520234 TRBV6-5A0A0K0K1A5 114 aa1.92□□□□□ -2.1
HMGB1P41-201ENST00000520234 H7BZZ5 65 aa1.92□□□□□ -2.1
HMGB1P41-201ENST00000520234 I3L3M4 83 aa1.92□□□□□ -2.1
HMGB1P41-201ENST00000520234 BCE1O60756 84 aa1.92□□□□□ -2.1
HMGB1P41-201ENST00000520234 TIMM17BO60830 172 aa1.92□□□□□ -2.1
HMGB1P41-201ENST00000520234 NDUFC2O95298 119 aa1.92□□□□□ -2.1
HMGB1P41-201ENST00000520234 IGKV2D-40P01614 121 aaPredicted RBP1.92□□□□□ -2.1
HMGB1P41-201ENST00000520234 IGHV1-69P01742 117 aa1.92□□□□□ -2.1
HMGB1P41-201ENST00000520234 RHOHQ15669 191 aa1.92□□□□□ -2.1
HMGB1P41-201ENST00000520234 SCGB1D4Q6XE38 83 aa1.92□□□□□ -2.1
HMGB1P41-201ENST00000520234 FAM19A1Q7Z5A9 133 aa1.92□□□□□ -2.1
HMGB1P41-201ENST00000520234 Q8N2B8 174 aa1.92□□□□□ -2.1
HMGB1P41-201ENST00000520234 CLEC2BQ92478 149 aa1.92□□□□□ -2.1
HMGB1P41-201ENST00000520234 TMEM141Q96I45 108 aa1.92□□□□□ -2.1
HMGB1P41-201ENST00000520234 TP53TG1Q9Y2A0 90 aa1.92□□□□□ -2.1
HMGB1P41-201ENST00000520234 SERP1Q9Y6X1 66 aa1.92□□□□□ -2.1
HMGB1P41-201ENST00000520234 CNOT1A5YKK6 2376 aaKnown RBP1.92□□□□□ -2.1
HMGB1P41-201ENST00000520234 KALRNO60229 2985 aa1.91□□□□□ -2.1
HMGB1P41-201ENST00000520234 SPTBN2O15020 2390 aa1.91□□□□□ -2.1
HMGB1P41-201ENST00000520234 PKDREJQ9NTG1 2253 aa1.91□□□□□ -2.1
HMGB1P41-201ENST00000520234 TRAV21A0A0B4J279 112 aa1.91□□□□□ -2.1
HMGB1P41-201ENST00000520234 TRBV27A0A0K0K1C4 114 aa1.91□□□□□ -2.1
HMGB1P41-201ENST00000520234 IBA57-AS1B1ANH7 110 aa1.91□□□□□ -2.1
HMGB1P41-201ENST00000520234 G3V318 75 aa1.91□□□□□ -2.1
HMGB1P41-201ENST00000520234 IGHG2P01859 326 aa1.91□□□□□ -2.1
HMGB1P41-201ENST00000520234 RNASE4P34096 147 aaKnown RBP1.91□□□□□ -2.1
HMGB1P41-201ENST00000520234 MRPS36P82909 103 aaKnown RBP1.91□□□□□ -2.1
HMGB1P41-201ENST00000520234 PRB3Q04118 309 aaPredicted RBP1.91□□□□□ -2.1
HMGB1P41-201ENST00000520234 KLKP1Q107X0 134 aa1.91□□□□□ -2.1
HMGB1P41-201ENST00000520234 SS18Q15532 418 aa1.91□□□□□ -2.1
HMGB1P41-201ENST00000520234 MIAQ16674 131 aa1.91□□□□□ -2.1
HMGB1P41-201ENST00000520234 LINC00483Q53H64 154 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms