RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 B5MCH6 92 aa11.74□□□□□ -0.53
PCDHGA11-202ENST00000518882 LOC100131303A0A0U1RQF7 123 aa11.74□□□□□ -0.53
PCDHGA11-202ENST00000518882 SS18L2Q9UHA2 77 aa11.74□□□□□ -0.53
PCDHGA11-202ENST00000518882 CCDC179H3BU77 68 aa11.73□□□□□ -0.53
PCDHGA11-202ENST00000518882 GIG44P09565 113 aaPredicted RBP11.73□□□□□ -0.53
PCDHGA11-202ENST00000518882 MRPL23Q16540 153 aaKnown RBP11.72□□□□□ -0.53
PCDHGA11-202ENST00000518882 FAM218AQ96MZ4 157 aa11.72□□□□□ -0.53
PCDHGA11-202ENST00000518882 PLAC8L1A1L4L8 177 aa11.72□□□□□ -0.53
PCDHGA11-202ENST00000518882 CCL24O00175 119 aa11.72□□□□□ -0.53
PCDHGA11-202ENST00000518882 COPS9Q8WXC6 57 aa11.72□□□□□ -0.53
PCDHGA11-202ENST00000518882 WFDC10AQ9H1F0 79 aa11.72□□□□□ -0.53
PCDHGA11-202ENST00000518882 HERV-K104P63124 156 aa11.71□□□□□ -0.53
PCDHGA11-202ENST00000518882 TMEM243Q9BU79 118 aa11.71□□□□□ -0.53
PCDHGA11-202ENST00000518882 UBE2L6O14933 153 aa11.71□□□□□ -0.54
PCDHGA11-202ENST00000518882 KRTAP1-3Q8IUG1 177 aa11.71□□□□□ -0.54
PCDHGA11-202ENST00000518882 C22orf24Q9Y442 160 aa11.71□□□□□ -0.54
PCDHGA11-202ENST00000518882 DNAJC9-AS1A6NH13 148 aa11.7□□□□□ -0.54
PCDHGA11-202ENST00000518882 GAGE7O76087 117 aa11.7□□□□□ -0.54
PCDHGA11-202ENST00000518882 GAGE12FP0CL80 117 aa11.7□□□□□ -0.54
PCDHGA11-202ENST00000518882 GAGE12GP0CL81 117 aa11.7□□□□□ -0.54
PCDHGA11-202ENST00000518882 GAGE12IP0CL82 117 aa11.7□□□□□ -0.54
PCDHGA11-202ENST00000518882 PLA2G2AP14555 144 aa11.7□□□□□ -0.54
PCDHGA11-202ENST00000518882 CCDC168Q8NDH2 2452 aa11.7□□□□□ -0.54
PCDHGA11-202ENST00000518882 FLNAP21333 2647 aaKnown RBP11.69□□□□□ -0.54
PCDHGA11-202ENST00000518882 BBC3Q96PG8 261 aaPredicted RBP11.69□□□□□ -0.54
PCDHGA11-202ENST00000518882 TRACP01848 142 aa11.68□□□□□ -0.54
PCDHGA11-202ENST00000518882 ESM1Q9NQ30 184 aa11.68□□□□□ -0.54
PCDHGA11-202ENST00000518882 TRGV2A0A075B6R0 118 aa11.67□□□□□ -0.54
PCDHGA11-202ENST00000518882 IGKV3OR2-268A0A0C4DH90 116 aa11.67□□□□□ -0.54
PCDHGA11-202ENST00000518882 SMCR5Q8TEV8 140 aa11.67□□□□□ -0.54
PCDHGA11-202ENST00000518882 TRBV7-7A0A0K0K1E9 115 aa11.67□□□□□ -0.54
PCDHGA11-202ENST00000518882 BAALC-AS2P0C853 105 aa11.67□□□□□ -0.54
PCDHGA11-202ENST00000518882 TMEM86BQ8N661 226 aa11.67□□□□□ -0.54
PCDHGA11-202ENST00000518882 LINC00337Q8N6G1 96 aa11.67□□□□□ -0.54
PCDHGA11-202ENST00000518882 IGKV2-28A0A075B6P5 120 aa11.66□□□□□ -0.54
PCDHGA11-202ENST00000518882 IGKV2D-28P01615 120 aa11.66□□□□□ -0.54
PCDHGA11-202ENST00000518882 MIR7-3HGQ8N6C7 128 aa11.66□□□□□ -0.54
PCDHGA11-202ENST00000518882 COX7B2Q8TF08 81 aa11.66□□□□□ -0.54
PCDHGA11-202ENST00000518882 IGLV4-60A0A075B6I1 120 aa11.66□□□□□ -0.54
PCDHGA11-202ENST00000518882 RPL35AP18077 110 aaKnown RBP11.66□□□□□ -0.54
PCDHGA11-202ENST00000518882 LRRC75A-AS1Q8N1F1 130 aa11.66□□□□□ -0.54
PCDHGA11-202ENST00000518882 TOMM7Q9P0U1 55 aa11.66□□□□□ -0.54
PCDHGA11-202ENST00000518882 HIST2H2BCQ6DN03 193 aa11.65□□□□□ -0.54
PCDHGA11-202ENST00000518882 C16orf74Q96GX8 76 aa11.65□□□□□ -0.54
PCDHGA11-202ENST00000518882 CHCHD5Q9BSY4 110 aa11.65□□□□□ -0.55
PCDHGA11-202ENST00000518882 PPDPFQ9H3Y8 114 aa11.65□□□□□ -0.55
PCDHGA11-202ENST00000518882 Q9HAA7 133 aa11.65□□□□□ -0.55
PCDHGA11-202ENST00000518882 TRBV6-4A0A1B0GX49 114 aa11.63□□□□□ -0.55
PCDHGA11-202ENST00000518882 ACYP1P07311 99 aa11.63□□□□□ -0.55
PCDHGA11-202ENST00000518882 CRPP02741 224 aa11.63□□□□□ -0.55
PCDHGA11-202ENST00000518882 RPL28P46779 137 aaKnown RBP11.63□□□□□ -0.55
PCDHGA11-202ENST00000518882 CSNK1G2-AS1Q8NCQ2 148 aa11.63□□□□□ -0.55
PCDHGA11-202ENST00000518882 SND1-IT1Q9HBX3 110 aa11.63□□□□□ -0.55
PCDHGA11-202ENST00000518882 C19orf73Q9NVV2 129 aa11.63□□□□□ -0.55
PCDHGA11-202ENST00000518882 TRAV13-2A0A0B4J235 113 aa11.62□□□□□ -0.55
PCDHGA11-202ENST00000518882 TRGV4A0A0C4DH28 118 aa11.62□□□□□ -0.55
PCDHGA11-202ENST00000518882 IGHV3OR16-9A0A0B4J2B5 98 aa11.62□□□□□ -0.55
PCDHGA11-202ENST00000518882 PF4P02776 101 aa11.61□□□□□ -0.55
PCDHGA11-202ENST00000518882 TRBV6-8A0A0A6YYG3 113 aa11.61□□□□□ -0.55
PCDHGA11-202ENST00000518882 FAM222AQ5U5X8 452 aa11.61□□□□□ -0.55
PCDHGA11-202ENST00000518882 WFDC11Q8NEX6 87 aa11.61□□□□□ -0.55
PCDHGA11-202ENST00000518882 OVOL2Q9BRP0 275 aa11.61□□□□□ -0.55
PCDHGA11-202ENST00000518882 LINC00158P58513 81 aa11.6□□□□□ -0.55
PCDHGA11-202ENST00000518882 FHL2Q14192 279 aa11.6□□□□□ -0.55
PCDHGA11-202ENST00000518882 A0A087WYN8 130 aa11.6□□□□□ -0.55
PCDHGA11-202ENST00000518882 CCL18P55774 89 aa11.6□□□□□ -0.55
PCDHGA11-202ENST00000518882 SMIM11BQ8TCY0 68 aa11.6□□□□□ -0.55
PCDHGA11-202ENST00000518882 SDIM1Q6ZPB5 146 aa11.59□□□□□ -0.55
PCDHGA11-202ENST00000518882 MTORP42345 2549 aa11.59□□□□□ -0.55
PCDHGA11-202ENST00000518882 ACANP16112 2415 aa11.59□□□□□ -0.55
PCDHGA11-202ENST00000518882 FAM236AA0A1B0GUQ0 79 aa11.58□□□□□ -0.55
PCDHGA11-202ENST00000518882 FAM236BA0A1B0GV22 79 aa11.58□□□□□ -0.55
PCDHGA11-202ENST00000518882 MALP21145 153 aa11.58□□□□□ -0.55
PCDHGA11-202ENST00000518882 C5orf38Q86SI9 138 aa11.58□□□□□ -0.55
PCDHGA11-202ENST00000518882 ZNF843Q8N446 348 aa11.58□□□□□ -0.55
PCDHGA11-202ENST00000518882 FN1P02751 2386 aaKnown RBP11.57□□□□□ -0.56
PCDHGA11-202ENST00000518882 IGLV1-51P01701 117 aa11.57□□□□□ -0.56
PCDHGA11-202ENST00000518882 C9orf129Q5T035 196 aaKnown RBP11.57□□□□□ -0.56
PCDHGA11-202ENST00000518882 LINC00643Q86TS7 51 aa11.57□□□□□ -0.56
PCDHGA11-202ENST00000518882 LINC01006Q8NI28 216 aa11.57□□□□□ -0.56
PCDHGA11-202ENST00000518882 A0A087WZ39 114 aa11.57□□□□□ -0.56
PCDHGA11-202ENST00000518882 PFN2P35080 140 aa11.57□□□□□ -0.56
PCDHGA11-202ENST00000518882 IMUPQ9GZP8 106 aa11.56□□□□□ -0.56
PCDHGA11-202ENST00000518882 GCN1Q92616 2671 aaKnown RBP11.56□□□□□ -0.56
PCDHGA11-202ENST00000518882 CMC4P56277 68 aaPredicted RBP11.55□□□□□ -0.56
PCDHGA11-202ENST00000518882 GAGE2AQ6NT46 116 aa11.55□□□□□ -0.56
PCDHGA11-202ENST00000518882 IBA57-AS1B1ANH7 110 aa11.55□□□□□ -0.56
PCDHGA11-202ENST00000518882 INAFM2P0DMQ5 153 aa11.54□□□□□ -0.56
PCDHGA11-202ENST00000518882 FAM110AQ9BQ89 295 aa11.54□□□□□ -0.56
PCDHGA11-202ENST00000518882 C11orf68Q9H3H3 251 aaKnown RBP11.54□□□□□ -0.56
PCDHGA11-202ENST00000518882 LINC00959A0A1B0GUT2 108 aa11.53□□□□□ -0.56
PCDHGA11-202ENST00000518882 ATP5G1P05496 136 aa11.53□□□□□ -0.56
PCDHGA11-202ENST00000518882 NBEAL2Q6ZNJ1 2754 aa11.52□□□□□ -0.57
PCDHGA11-202ENST00000518882 DNAL4O96015 105 aa11.52□□□□□ -0.57
PCDHGA11-202ENST00000518882 DEFB130BP0DP73 79 aa11.52□□□□□ -0.57
PCDHGA11-202ENST00000518882 DEFB130AP0DP74 79 aa11.52□□□□□ -0.57
PCDHGA11-202ENST00000518882 C3orf56Q8N813 242 aa11.52□□□□□ -0.57
PCDHGA11-202ENST00000518882 ANK3Q12955 4377 aaKnown RBP11.51□□□□□ -0.57
PCDHGA11-202ENST00000518882 PAX4O43316 350 aa11.51□□□□□ -0.57
PCDHGA11-202ENST00000518882 SVIPQ8NHG7 77 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 171.9 ms