RNA–Protein interactions for RNA: ENST00000514949.1

SNX2-213, Transcript of sorting nexin 2, humanhuman

TSL 2 BASIC

Gene SNX2, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-213ENST00000514949 CUBNO60494 3623 aa12.38□□□□□ -0.43
SNX2-213ENST00000514949 GAGE7O76087 117 aa12.37□□□□□ -0.43
SNX2-213ENST00000514949 GAGE12FP0CL80 117 aa12.37□□□□□ -0.43
SNX2-213ENST00000514949 GAGE12GP0CL81 117 aa12.37□□□□□ -0.43
SNX2-213ENST00000514949 GAGE12IP0CL82 117 aa12.37□□□□□ -0.43
SNX2-213ENST00000514949 PRIMA1Q86XR5 153 aa12.37□□□□□ -0.43
SNX2-213ENST00000514949 WFDC10AQ9H1F0 79 aa12.37□□□□□ -0.43
SNX2-213ENST00000514949 JMJD1CQ15652 2540 aa12.37□□□□□ -0.43
SNX2-213ENST00000514949 C2orf82Q6UX34 121 aa12.37□□□□□ -0.43
SNX2-213ENST00000514949 SOSTDC1Q6X4U4 206 aa12.37□□□□□ -0.43
SNX2-213ENST00000514949 RPL35AP18077 110 aaKnown RBP12.36□□□□□ -0.43
SNX2-213ENST00000514949 SHISA2Q6UWI4 295 aa12.36□□□□□ -0.43
SNX2-213ENST00000514949 NOTCH3Q9UM47 2321 aa12.36□□□□□ -0.43
SNX2-213ENST00000514949 KMT2BQ9UMN6 2715 aaPredicted RBP12.36□□□□□ -0.43
SNX2-213ENST00000514949 CLEC2BQ92478 149 aa12.35□□□□□ -0.43
SNX2-213ENST00000514949 TEX49A0A1B0GTD5 131 aa12.35□□□□□ -0.43
SNX2-213ENST00000514949 FHL2Q14192 279 aa12.35□□□□□ -0.43
SNX2-213ENST00000514949 DEFB121Q5J5C9 76 aa12.35□□□□□ -0.43
SNX2-213ENST00000514949 UBE2WQ96B02 151 aa12.35□□□□□ -0.43
SNX2-213ENST00000514949 SETD2Q9BYW2 2564 aaPredicted RBP12.35□□□□□ -0.43
SNX2-213ENST00000514949 HILS1P60008 231 aa12.34□□□□□ -0.43
SNX2-213ENST00000514949 C2CD3Q4AC94 2353 aa12.34□□□□□ -0.43
SNX2-213ENST00000514949 TENM4Q6N022 2769 aa12.34□□□□□ -0.43
SNX2-213ENST00000514949 LOC100131303A0A0U1RQF7 123 aa12.34□□□□□ -0.43
SNX2-213ENST00000514949 TRGV4A0A0C4DH28 118 aa12.33□□□□□ -0.44
SNX2-213ENST00000514949 TRBV6-8A0A0A6YYG3 113 aa12.32□□□□□ -0.44
SNX2-213ENST00000514949 MEIG1Q5JSS6 88 aa12.32□□□□□ -0.44
SNX2-213ENST00000514949 CITED1Q99966 193 aa12.32□□□□□ -0.44
SNX2-213ENST00000514949 COX7A2LO14548 114 aa12.32□□□□□ -0.44
SNX2-213ENST00000514949 CKS1BP61024 79 aa12.32□□□□□ -0.44
SNX2-213ENST00000514949 LINC00612Q8N6U2 182 aa12.31□□□□□ -0.44
SNX2-213ENST00000514949 ACANP16112 2415 aa12.31□□□□□ -0.44
SNX2-213ENST00000514949 KIR2DL5BQ8NHK3 375 aa12.31□□□□□ -0.44
SNX2-213ENST00000514949 HIST2H2BCQ6DN03 193 aa12.3□□□□□ -0.44
SNX2-213ENST00000514949 IGHV3OR16-9A0A0B4J2B5 98 aa12.29□□□□□ -0.44
SNX2-213ENST00000514949 PF4P02776 101 aa12.29□□□□□ -0.44
SNX2-213ENST00000514949 COX7B2Q8TF08 81 aa12.29□□□□□ -0.44
SNX2-213ENST00000514949 MTORP42345 2549 aa12.29□□□□□ -0.44
SNX2-213ENST00000514949 TRAV8-4A0A0B4J246 113 aa12.29□□□□□ -0.44
SNX2-213ENST00000514949 A0A0U1RRA0 63 aa12.29□□□□□ -0.44
SNX2-213ENST00000514949 FAM240AA0A1B0GVK7 77 aa12.29□□□□□ -0.44
SNX2-213ENST00000514949 FAM222AQ5U5X8 452 aa12.28□□□□□ -0.44
SNX2-213ENST00000514949 PLA2G2AP14555 144 aa12.28□□□□□ -0.44
SNX2-213ENST00000514949 GAGE6Q13070 117 aa12.28□□□□□ -0.44
SNX2-213ENST00000514949 IGLV4-60A0A075B6I1 120 aa12.27□□□□□ -0.45
SNX2-213ENST00000514949 A0A087WZ39 114 aa12.26□□□□□ -0.45
SNX2-213ENST00000514949 TRACP01848 142 aa12.26□□□□□ -0.45
SNX2-213ENST00000514949 ITPR2Q14571 2701 aa12.25□□□□□ -0.45
SNX2-213ENST00000514949 MRPL23Q16540 153 aaKnown RBP12.25□□□□□ -0.45
SNX2-213ENST00000514949 TRAV13-2A0A0B4J235 113 aa12.25□□□□□ -0.45
SNX2-213ENST00000514949 Q6Q795 121 aa12.24□□□□□ -0.45
SNX2-213ENST00000514949 CHCHD5Q9BSY4 110 aa12.24□□□□□ -0.45
SNX2-213ENST00000514949 RPL28P46779 137 aaKnown RBP12.23□□□□□ -0.45
SNX2-213ENST00000514949 LINC00482Q8N8I6 264 aa12.23□□□□□ -0.45
SNX2-213ENST00000514949 SNCGO76070 127 aa12.23□□□□□ -0.45
SNX2-213ENST00000514949 SMIM9A6NGZ8 99 aa12.22□□□□□ -0.45
SNX2-213ENST00000514949 IBA57-AS1B1ANH7 110 aa12.22□□□□□ -0.45
SNX2-213ENST00000514949 MIR7-3HGQ8N6C7 128 aa12.22□□□□□ -0.45
SNX2-213ENST00000514949 A0A1B0GUV1 79 aa12.22□□□□□ -0.45
SNX2-213ENST00000514949 KRTAP10-3P60369 221 aa12.22□□□□□ -0.45
SNX2-213ENST00000514949 LINC00959A0A1B0GUT2 108 aa12.2□□□□□ -0.46
SNX2-213ENST00000514949 CRLF1O75462 422 aa12.2□□□□□ -0.46
SNX2-213ENST00000514949 GAGE2BQ13066 116 aa12.2□□□□□ -0.46
SNX2-213ENST00000514949 GAGE2EQ4V326 116 aa12.2□□□□□ -0.46
SNX2-213ENST00000514949 GAGE2DQ9UEU5 116 aa12.2□□□□□ -0.46
SNX2-213ENST00000514949 IGKV2-28A0A075B6P5 120 aa12.2□□□□□ -0.46
SNX2-213ENST00000514949 IGKV2D-28P01615 120 aa12.2□□□□□ -0.46
SNX2-213ENST00000514949 X6R8D5 127 aa12.2□□□□□ -0.46
SNX2-213ENST00000514949 SND1-IT1Q9HBX3 110 aa12.19□□□□□ -0.46
SNX2-213ENST00000514949 CRPP02741 224 aa12.19□□□□□ -0.46
SNX2-213ENST00000514949 DEFB130BP0DP73 79 aa12.19□□□□□ -0.46
SNX2-213ENST00000514949 DEFB130AP0DP74 79 aa12.19□□□□□ -0.46
SNX2-213ENST00000514949 LINC00337Q8N6G1 96 aa12.19□□□□□ -0.46
SNX2-213ENST00000514949 C15orf53Q8NAA6 179 aa12.19□□□□□ -0.46
SNX2-213ENST00000514949 TOMM7Q9P0U1 55 aa12.19□□□□□ -0.46
SNX2-213ENST00000514949 UNC79Q9P2D8 2635 aa12.18□□□□□ -0.46
SNX2-213ENST00000514949 LINC01561Q8N1V8 128 aa12.18□□□□□ -0.46
SNX2-213ENST00000514949 IGKV3OR2-268A0A0C4DH90 116 aa12.17□□□□□ -0.46
SNX2-213ENST00000514949 ACYP1P07311 99 aa12.17□□□□□ -0.46
SNX2-213ENST00000514949 GYPEP15421 78 aa12.17□□□□□ -0.46
SNX2-213ENST00000514949 J3QKU1 62 aa12.17□□□□□ -0.46
SNX2-213ENST00000514949 FAM218AQ96MZ4 157 aa12.17□□□□□ -0.46
SNX2-213ENST00000514949 PRO0255Q9UI72 69 aa12.17□□□□□ -0.46
SNX2-213ENST00000514949 TRAV26-1A0A087WT03 109 aa12.16□□□□□ -0.46
SNX2-213ENST00000514949 CCL18P55774 89 aa12.16□□□□□ -0.46
SNX2-213ENST00000514949 LINC00158P58513 81 aa12.16□□□□□ -0.46
SNX2-213ENST00000514949 C22orf24Q9Y442 160 aa12.16□□□□□ -0.46
SNX2-213ENST00000514949 C5orf38Q86SI9 138 aa12.15□□□□□ -0.46
SNX2-213ENST00000514949 BAALC-AS2P0C853 105 aa12.14□□□□□ -0.47
SNX2-213ENST00000514949 HIVEP2P31629 2446 aa12.14□□□□□ -0.47
SNX2-213ENST00000514949 LYRM9A8MSI8 78 aa12.14□□□□□ -0.47
SNX2-213ENST00000514949 ANAPC13Q9BS18 74 aa12.14□□□□□ -0.47
SNX2-213ENST00000514949 SS18Q15532 418 aa12.13□□□□□ -0.47
SNX2-213ENST00000514949 HELZ2Q9BYK8 2649 aaKnown RBP12.13□□□□□ -0.47
SNX2-213ENST00000514949 Q8IZM0 81 aa12.13□□□□□ -0.47
SNX2-213ENST00000514949 NHLRC4P0CG21 123 aaPredicted RBP12.12□□□□□ -0.47
SNX2-213ENST00000514949 NDUFV3P56181 108 aaKnown RBP12.12□□□□□ -0.47
SNX2-213ENST00000514949 H0YGX0 51 aa12.11□□□□□ -0.47
SNX2-213ENST00000514949 SMIM11BQ8TCY0 68 aa12.11□□□□□ -0.47
SNX2-213ENST00000514949 C6orf226Q5I0X4 101 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms