RNA–Protein interactions for RNA: ENST00000514493.5

SSBP2-218, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SSBP2, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-218ENST00000514493 STARD9Q9P2P6 4700 aa13.42□□□□□ -0.26
SSBP2-218ENST00000514493 MYMXA0A1B0GTQ4 84 aa13.42□□□□□ -0.26
SSBP2-218ENST00000514493 TSPEAR-AS2P59090 65 aa13.42□□□□□ -0.26
SSBP2-218ENST00000514493 IGHV3-64A0A075B6Q5 118 aa13.41□□□□□ -0.26
SSBP2-218ENST00000514493 J3QQQ9 107 aa13.41□□□□□ -0.26
SSBP2-218ENST00000514493 ANGP03950 147 aaKnown RBP13.41□□□□□ -0.26
SSBP2-218ENST00000514493 PLEKHB2Q96CS7 222 aa13.41□□□□□ -0.26
SSBP2-218ENST00000514493 IGHV1-58A0A0C4DH39 117 aa13.4□□□□□ -0.26
SSBP2-218ENST00000514493 WWC2-AS2Q96NR7 200 aa13.4□□□□□ -0.26
SSBP2-218ENST00000514493 LINC00959A0A1B0GUT2 108 aa13.4□□□□□ -0.26
SSBP2-218ENST00000514493 ZNF815PA8K554 130 aa13.4□□□□□ -0.26
SSBP2-218ENST00000514493 M0R143 59 aa13.4□□□□□ -0.26
SSBP2-218ENST00000514493 SPINK8P0C7L1 97 aa13.4□□□□□ -0.26
SSBP2-218ENST00000514493 LGALS3P17931 250 aaKnown RBP13.4□□□□□ -0.26
SSBP2-218ENST00000514493 LINC01556Q5JQF7 62 aa13.4□□□□□ -0.26
SSBP2-218ENST00000514493 UPK3BQ9BT76 320 aa13.4□□□□□ -0.26
SSBP2-218ENST00000514493 PLECQ15149 4684 aaKnown RBP13.39□□□□□ -0.27
SSBP2-218ENST00000514493 TRAV8-3A0A0A6YYJ7 113 aa13.39□□□□□ -0.27
SSBP2-218ENST00000514493 IGHV3-30P01768 117 aa13.39□□□□□ -0.27
SSBP2-218ENST00000514493 IGHV3-33P01772 117 aa13.39□□□□□ -0.27
SSBP2-218ENST00000514493 IGHV3-30-3P0DP02 117 aa13.39□□□□□ -0.27
SSBP2-218ENST00000514493 IGHV3-30-5P0DP03 117 aa13.39□□□□□ -0.27
SSBP2-218ENST00000514493 LINC00269Q8N2A0 174 aa13.39□□□□□ -0.27
SSBP2-218ENST00000514493 SNHG12Q9BXW3 62 aa13.39□□□□□ -0.27
SSBP2-218ENST00000514493 HIGD1BQ9P298 99 aa13.39□□□□□ -0.27
SSBP2-218ENST00000514493 CLPSL2Q6UWE3 100 aa13.38□□□□□ -0.27
SSBP2-218ENST00000514493 EREGO14944 169 aa13.37□□□□□ -0.27
SSBP2-218ENST00000514493 CCL25O15444 150 aa13.37□□□□□ -0.27
SSBP2-218ENST00000514493 DNAH10OSP0CZ25 163 aa13.37□□□□□ -0.27
SSBP2-218ENST00000514493 MUC7Q8TAX7 377 aa13.37□□□□□ -0.27
SSBP2-218ENST00000514493 REG3AQ06141 175 aa13.37□□□□□ -0.27
SSBP2-218ENST00000514493 SS18Q15532 418 aa13.37□□□□□ -0.27
SSBP2-218ENST00000514493 ZFAND6Q6FIF0 208 aa13.37□□□□□ -0.27
SSBP2-218ENST00000514493 KLK12Q9UKR0 248 aa13.37□□□□□ -0.27
SSBP2-218ENST00000514493 SMIM1B2RUZ4 78 aa13.36□□□□□ -0.27
SSBP2-218ENST00000514493 PRR34Q9NV39 138 aa13.36□□□□□ -0.27
SSBP2-218ENST00000514493 IGLV5-39A0A0G2JS06 123 aa13.35□□□□□ -0.27
SSBP2-218ENST00000514493 TENM2Q9NT68 2774 aa13.35□□□□□ -0.27
SSBP2-218ENST00000514493 IGHV3OR16-9A0A0B4J2B5 98 aa13.35□□□□□ -0.27
SSBP2-218ENST00000514493 HINT1P49773 126 aaPredicted RBP13.34□□□□□ -0.27
SSBP2-218ENST00000514493 HSD52Q0P140 79 aa13.34□□□□□ -0.27
SSBP2-218ENST00000514493 LYSTQ99698 3801 aa13.33□□□□□ -0.27
SSBP2-218ENST00000514493 BATFQ16520 125 aa13.33□□□□□ -0.28
SSBP2-218ENST00000514493 SCGB1D4Q6XE38 83 aa13.33□□□□□ -0.28
SSBP2-218ENST00000514493 UBE2DNLQ8IWF7 75 aa13.33□□□□□ -0.28
SSBP2-218ENST00000514493 A0A087WZ39 114 aa13.32□□□□□ -0.28
SSBP2-218ENST00000514493 CRPP02741 224 aa13.32□□□□□ -0.28
SSBP2-218ENST00000514493 XCL1P47992 114 aa13.32□□□□□ -0.28
SSBP2-218ENST00000514493 LBHQ53QV2 105 aaPredicted RBP13.31□□□□□ -0.28
SSBP2-218ENST00000514493 ENHOQ6UWT2 76 aa13.31□□□□□ -0.28
SSBP2-218ENST00000514493 BVES-AS1Q5T3Y7 98 aa13.3□□□□□ -0.28
SSBP2-218ENST00000514493 UBE2WQ96B02 151 aa13.3□□□□□ -0.28
SSBP2-218ENST00000514493 NDUFA12Q9UI09 145 aa13.3□□□□□ -0.28
SSBP2-218ENST00000514493 CD164L2Q6UWJ8 174 aa13.29□□□□□ -0.28
SSBP2-218ENST00000514493 CHCHD10Q8WYQ3 142 aaPredicted RBP13.29□□□□□ -0.28
SSBP2-218ENST00000514493 Q9H8V8 135 aa13.29□□□□□ -0.28
SSBP2-218ENST00000514493 MIAQ16674 131 aa13.28□□□□□ -0.28
SSBP2-218ENST00000514493 C5orf38Q86SI9 138 aa13.28□□□□□ -0.28
SSBP2-218ENST00000514493 C10orf126Q8N4M7 172 aa13.28□□□□□ -0.28
SSBP2-218ENST00000514493 IGLV10-54A0A075B6I4 117 aa13.27□□□□□ -0.28
SSBP2-218ENST00000514493 TAL2Q16559 108 aa13.27□□□□□ -0.28
SSBP2-218ENST00000514493 TRAV8-4A0A0B4J246 113 aa13.27□□□□□ -0.29
SSBP2-218ENST00000514493 LINC01561Q8N1V8 128 aa13.27□□□□□ -0.29
SSBP2-218ENST00000514493 NDUFA1O15239 70 aa13.26□□□□□ -0.29
SSBP2-218ENST00000514493 CASC10Q5T4H9 136 aa13.25□□□□□ -0.29
SSBP2-218ENST00000514493 HIST1H4GQ99525 98 aa13.25□□□□□ -0.29
SSBP2-218ENST00000514493 A0A0J9YXY3 114 aa13.25□□□□□ -0.29
SSBP2-218ENST00000514493 SPANXB1Q9NS25 103 aaPredicted RBP13.25□□□□□ -0.29
SSBP2-218ENST00000514493 VPS13DQ5THJ4 4388 aa13.24□□□□□ -0.29
SSBP2-218ENST00000514493 IBA57-AS1B1ANH7 110 aa13.24□□□□□ -0.29
SSBP2-218ENST00000514493 K7EP13 123 aa13.24□□□□□ -0.29
SSBP2-218ENST00000514493 COX7A2LO14548 114 aa13.24□□□□□ -0.29
SSBP2-218ENST00000514493 COL5A1-AS1Q5SY13 56 aa13.24□□□□□ -0.29
SSBP2-218ENST00000514493 COX7B2Q8TF08 81 aa13.24□□□□□ -0.29
SSBP2-218ENST00000514493 ORAOV1Q8WV07 137 aa13.24□□□□□ -0.29
SSBP2-218ENST00000514493 DNAH1Q9P2D7 4330 aa13.23□□□□□ -0.29
SSBP2-218ENST00000514493 GCSHP23434 173 aa13.23□□□□□ -0.29
SSBP2-218ENST00000514493 FOXI1Q12951 378 aa13.23□□□□□ -0.29
SSBP2-218ENST00000514493 CEND1Q8N111 149 aa13.23□□□□□ -0.29
SSBP2-218ENST00000514493 TM2D2Q9BX73 214 aa13.22□□□□□ -0.29
SSBP2-218ENST00000514493 TMEM238C9JI98 176 aa13.22□□□□□ -0.29
SSBP2-218ENST00000514493 ZNF625Q96I27 306 aaPredicted RBP13.22□□□□□ -0.29
SSBP2-218ENST00000514493 TOMM7Q9P0U1 55 aa13.22□□□□□ -0.29
SSBP2-218ENST00000514493 GAGE12HA6NDE8 117 aa13.21□□□□□ -0.29
SSBP2-218ENST00000514493 C3orf84H3BNL1 204 aa13.21□□□□□ -0.29
SSBP2-218ENST00000514493 SRSF9Q13242 221 aaKnown RBP eCLIP13.21□□□□□ -0.29
SSBP2-218ENST00000514493 C1orf43Q9BWL3 253 aa13.2□□□□□ -0.3
SSBP2-218ENST00000514493 FXYD2P54710 66 aa13.2□□□□□ -0.3
SSBP2-218ENST00000514493 KRTAP26-1Q6PEX3 210 aa13.2□□□□□ -0.3
SSBP2-218ENST00000514493 MALP21145 153 aa13.19□□□□□ -0.3
SSBP2-218ENST00000514493 HERV-K104P63124 156 aa13.19□□□□□ -0.3
SSBP2-218ENST00000514493 KRTAP1-5Q9BYS1 174 aa13.19□□□□□ -0.3
SSBP2-218ENST00000514493 Q9HAA7 133 aa13.19□□□□□ -0.3
SSBP2-218ENST00000514493 TIMM17BO60830 172 aa13.18□□□□□ -0.3
SSBP2-218ENST00000514493 Q8IZM0 81 aa13.18□□□□□ -0.3
SSBP2-218ENST00000514493 LITAFQ99732 161 aa13.18□□□□□ -0.3
SSBP2-218ENST00000514493 A6NDN8 102 aa13.17□□□□□ -0.3
SSBP2-218ENST00000514493 IGKV2D-24A0A075B6R9 120 aa13.17□□□□□ -0.3
SSBP2-218ENST00000514493 PTTG1IPP53801 180 aa13.17□□□□□ -0.3
SSBP2-218ENST00000514493 SFTA2Q6UW10 78 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 419.8 ms