RNA–Protein interactions for RNA: ENST00000513819.1

NIPBL-207, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-207ENST00000513819 CGB7P0DN87 165 aa2.54□□□□□ -2
NIPBL-207ENST00000513819 ELOF1P60002 83 aaKnown RBP2.54□□□□□ -2
NIPBL-207ENST00000513819 RNASE13Q5GAN3 156 aaKnown RBP2.54□□□□□ -2
NIPBL-207ENST00000513819 C10orf128Q5T292 105 aa2.54□□□□□ -2
NIPBL-207ENST00000513819 C1orf134Q5TEV5 83 aa2.54□□□□□ -2
NIPBL-207ENST00000513819 ZFAND2AQ8N6M9 145 aa2.54□□□□□ -2
NIPBL-207ENST00000513819 DOCK11Q5JSL3 2073 aa2.54□□□□□ -2
NIPBL-207ENST00000513819 SCN3AQ9NY46 2000 aa2.53□□□□□ -2
NIPBL-207ENST00000513819 IGLV3-25P01717 112 aa2.53□□□□□ -2
NIPBL-207ENST00000513819 CTSGP08311 255 aa2.53□□□□□ -2
NIPBL-207ENST00000513819 SAA2P0DJI9 122 aaPredicted RBP2.53□□□□□ -2
NIPBL-207ENST00000513819 RPS27P42677 84 aaKnown RBP2.53□□□□□ -2
NIPBL-207ENST00000513819 MIAQ16674 131 aa2.53□□□□□ -2
NIPBL-207ENST00000513819 Q86TA4 180 aa2.53□□□□□ -2
NIPBL-207ENST00000513819 LINC00467Q9BRT7 94 aa2.53□□□□□ -2
NIPBL-207ENST00000513819 PRR15LQ9BU68 103 aa2.53□□□□□ -2
NIPBL-207ENST00000513819 CNFNQ9BYD5 112 aa2.53□□□□□ -2
NIPBL-207ENST00000513819 UBL5Q9BZL1 73 aa2.53□□□□□ -2
NIPBL-207ENST00000513819 C14orf132Q9NPU4 83 aa2.53□□□□□ -2
NIPBL-207ENST00000513819 COL4A4P53420 1690 aaPredicted RBP2.53□□□□□ -2
NIPBL-207ENST00000513819 MYO9BQ13459 2157 aa2.52□□□□□ -2.01
NIPBL-207ENST00000513819 RTL8CO15255 209 aa2.52□□□□□ -2.01
NIPBL-207ENST00000513819 PPP1R17O96001 155 aa2.52□□□□□ -2.01
NIPBL-207ENST00000513819 IGLV3-1P01715 115 aa2.52□□□□□ -2.01
NIPBL-207ENST00000513819 IGHV3-11P01762 117 aa2.52□□□□□ -2.01
NIPBL-207ENST00000513819 TFF1P04155 84 aa2.52□□□□□ -2.01
NIPBL-207ENST00000513819 IGHV3-30-3P0DP02 117 aa2.52□□□□□ -2.01
NIPBL-207ENST00000513819 HCP5Q6MZN7 132 aa2.52□□□□□ -2.01
NIPBL-207ENST00000513819 ADM2Q7Z4H4 148 aa2.52□□□□□ -2.01
NIPBL-207ENST00000513819 Q8NDZ9 215 aa2.52□□□□□ -2.01
NIPBL-207ENST00000513819 WFDC9Q8NEX5 89 aa2.52□□□□□ -2.01
NIPBL-207ENST00000513819 ZCCHC13Q8WW36 166 aaKnown RBP2.52□□□□□ -2.01
NIPBL-207ENST00000513819 Q9BRP9 147 aa2.52□□□□□ -2.01
NIPBL-207ENST00000513819 NDUFA4L2Q9NRX3 87 aa2.52□□□□□ -2.01
NIPBL-207ENST00000513819 EML5Q05BV3 1969 aa2.52□□□□□ -2.01
NIPBL-207ENST00000513819 IGKV1D-42A0A075B6H8 117 aa2.51□□□□□ -2.01
NIPBL-207ENST00000513819 IGHV3-43A0A0B4J1X8 118 aa2.51□□□□□ -2.01
NIPBL-207ENST00000513819 IGHV7-4-1A0A0J9YVY3 117 aa2.51□□□□□ -2.01
NIPBL-207ENST00000513819 TRBV6-5A0A0K0K1A5 114 aa2.51□□□□□ -2.01
NIPBL-207ENST00000513819 CXorf51AA0A1B0GTR3 108 aa2.51□□□□□ -2.01
NIPBL-207ENST00000513819 CNEP1R1Q8N9A8 125 aa2.51□□□□□ -2.01
NIPBL-207ENST00000513819 PLAC8Q9NZF1 115 aa2.51□□□□□ -2.01
NIPBL-207ENST00000513819 PLXNA2O75051 1894 aa2.5□□□□□ -2.01
NIPBL-207ENST00000513819 IGHV3OR16-8A0A075B7F1 116 aa2.5□□□□□ -2.01
NIPBL-207ENST00000513819 TRAV12-3A0A0B4J271 114 aa2.5□□□□□ -2.01
NIPBL-207ENST00000513819 JMJD7-PLA2G4BH0Y9G9 81 aa2.5□□□□□ -2.01
NIPBL-207ENST00000513819 CRPP02741 224 aa2.5□□□□□ -2.01
NIPBL-207ENST00000513819 CMC4P56277 68 aaPredicted RBP2.5□□□□□ -2.01
NIPBL-207ENST00000513819 FDCSPQ8NFU4 85 aa2.5□□□□□ -2.01
NIPBL-207ENST00000513819 ZNF625Q96I27 306 aaPredicted RBP2.5□□□□□ -2.01
NIPBL-207ENST00000513819 MUC22E2RYF6 1773 aaPredicted RBP2.5□□□□□ -2.01
NIPBL-207ENST00000513819 COL4A1P02462 1669 aa2.5□□□□□ -2.01
NIPBL-207ENST00000513819 A0A1W2PNM2 257 aa2.49□□□□□ -2.01
NIPBL-207ENST00000513819 IGHV1-69P01742 117 aa2.49□□□□□ -2.01
NIPBL-207ENST00000513819 CLPSP04118 112 aa2.49□□□□□ -2.01
NIPBL-207ENST00000513819 FAM74A4Q5TZK3 123 aa2.49□□□□□ -2.01
NIPBL-207ENST00000513819 SMIM2Q9BVW6 85 aa2.49□□□□□ -2.01
NIPBL-207ENST00000513819 MRPL36Q9P0J6 103 aaKnown RBP2.49□□□□□ -2.01
NIPBL-207ENST00000513819 NOTCH2Q04721 2471 aa2.49□□□□□ -2.01
NIPBL-207ENST00000513819 CLPSL1A2RUU4 121 aa2.48□□□□□ -2.01
NIPBL-207ENST00000513819 C17orf98A8MV24 154 aa2.48□□□□□ -2.01
NIPBL-207ENST00000513819 LY6EQ16553 131 aa2.48□□□□□ -2.01
NIPBL-207ENST00000513819 KRTAP5-2Q701N4 177 aa2.48□□□□□ -2.01
NIPBL-207ENST00000513819 Q8NAQ8 132 aa2.48□□□□□ -2.01
NIPBL-207ENST00000513819 MUC7Q8TAX7 377 aa2.48□□□□□ -2.01
NIPBL-207ENST00000513819 LINC01558Q9Y6Z2 57 aa2.48□□□□□ -2.01
NIPBL-207ENST00000513819 TANC2Q9HCD6 1990 aa2.48□□□□□ -2.01
NIPBL-207ENST00000513819 COL5A1P20908 1838 aaPredicted RBP2.47□□□□□ -2.01
NIPBL-207ENST00000513819 IGHV3-49A0A0A0MS15 119 aa2.47□□□□□ -2.01
NIPBL-207ENST00000513819 TRAV21A0A0B4J279 112 aa2.47□□□□□ -2.01
NIPBL-207ENST00000513819 H0YGX0 51 aa2.47□□□□□ -2.01
NIPBL-207ENST00000513819 NDUFB1O75438 58 aa2.47□□□□□ -2.01
NIPBL-207ENST00000513819 MSMBP08118 114 aa2.47□□□□□ -2.01
NIPBL-207ENST00000513819 CRIP1P50238 77 aa2.47□□□□□ -2.01
NIPBL-207ENST00000513819 CNBPP62633 177 aaKnown RBP2.47□□□□□ -2.01
NIPBL-207ENST00000513819 PDE6HQ13956 83 aa2.47□□□□□ -2.01
NIPBL-207ENST00000513819 Q6ZQT0 140 aa2.47□□□□□ -2.01
NIPBL-207ENST00000513819 LYPD1Q8N2G4 141 aa2.47□□□□□ -2.01
NIPBL-207ENST00000513819 MIR7-3HGQ8N6C7 128 aa2.47□□□□□ -2.01
NIPBL-207ENST00000513819 SPANXA2-OT1Q8N9U9 137 aa2.47□□□□□ -2.01
NIPBL-207ENST00000513819 HIGD2AQ9BW72 106 aa2.47□□□□□ -2.01
NIPBL-207ENST00000513819 MED13Q9UHV7 2174 aa2.47□□□□□ -2.01
NIPBL-207ENST00000513819 PCNX2A6NKB5 2137 aa2.47□□□□□ -2.01
NIPBL-207ENST00000513819 TET1Q8NFU7 2136 aa2.47□□□□□ -2.01
NIPBL-207ENST00000513819 HEATR1Q9H583 2144 aaKnown RBP2.47□□□□□ -2.01
NIPBL-207ENST00000513819 MYOFQ9NZM1 2061 aa2.46□□□□□ -2.01
NIPBL-207ENST00000513819 LOC110117498A0A087WWA1 95 aa2.46□□□□□ -2.02
NIPBL-207ENST00000513819 IGHV3-21A0A0B4J1V1 117 aa2.46□□□□□ -2.02
NIPBL-207ENST00000513819 TRBV10-1A0A0K0K1A3 114 aa2.46□□□□□ -2.02
NIPBL-207ENST00000513819 LECT2O14960 151 aa2.46□□□□□ -2.02
NIPBL-207ENST00000513819 P0C880 135 aa2.46□□□□□ -2.02
NIPBL-207ENST00000513819 PDE6GP18545 87 aa2.46□□□□□ -2.02
NIPBL-207ENST00000513819 PIGYQ3MUY2 71 aa2.46□□□□□ -2.02
NIPBL-207ENST00000513819 KRTAP13-3Q3SY46 172 aa2.46□□□□□ -2.02
NIPBL-207ENST00000513819 LUZP6Q538Z0 58 aa2.46□□□□□ -2.02
NIPBL-207ENST00000513819 C10orf113Q5VZT2 155 aa2.46□□□□□ -2.02
NIPBL-207ENST00000513819 CSAG1Q6PB30 78 aa2.46□□□□□ -2.02
NIPBL-207ENST00000513819 CHCHD7Q9BUK0 85 aa2.46□□□□□ -2.02
NIPBL-207ENST00000513819 ORMDL1Q9P0S3 153 aa2.46□□□□□ -2.02
NIPBL-207ENST00000513819 A0A087WSZ3 146 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms