RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 TRBV7-6A0A0J9YX20 115 aa3.3□□□□□ -1.88
PDLIM5-211ENST00000508531 A0A0U1RQV1 116 aa3.3□□□□□ -1.88
PDLIM5-211ENST00000508531 JMJD7-PLA2G4BH0Y9G9 81 aa3.3□□□□□ -1.88
PDLIM5-211ENST00000508531 H3BTX0 84 aa3.3□□□□□ -1.88
PDLIM5-211ENST00000508531 I3L2K1 104 aa3.3□□□□□ -1.88
PDLIM5-211ENST00000508531 SOCS3O14543 225 aa3.3□□□□□ -1.88
PDLIM5-211ENST00000508531 NXPH4O95158 308 aa3.3□□□□□ -1.88
PDLIM5-211ENST00000508531 LHBP01229 141 aa3.3□□□□□ -1.88
PDLIM5-211ENST00000508531 IGKV1-17P01599 117 aa3.3□□□□□ -1.88
PDLIM5-211ENST00000508531 IGKV3-15P01624 115 aa3.3□□□□□ -1.88
PDLIM5-211ENST00000508531 IGHV3-9P01782 118 aa3.3□□□□□ -1.88
PDLIM5-211ENST00000508531 BAALC-AS2P0C853 105 aa3.3□□□□□ -1.88
PDLIM5-211ENST00000508531 S100A4P26447 101 aaKnown RBP3.3□□□□□ -1.88
PDLIM5-211ENST00000508531 PMAIP1Q13794 54 aa3.3□□□□□ -1.88
PDLIM5-211ENST00000508531 DAZ4Q86SG3 579 aaKnown RBP3.3□□□□□ -1.88
PDLIM5-211ENST00000508531 C10orf105Q8TEF2 133 aa3.3□□□□□ -1.88
PDLIM5-211ENST00000508531 DYNLRB2Q8TF09 96 aa3.3□□□□□ -1.88
PDLIM5-211ENST00000508531 DAZ1Q9NQZ3 744 aaKnown RBP3.3□□□□□ -1.88
PDLIM5-211ENST00000508531 DAZ3Q9NR90 486 aaKnown RBP3.3□□□□□ -1.88
PDLIM5-211ENST00000508531 PKIGQ9Y2B9 76 aa3.3□□□□□ -1.88
PDLIM5-211ENST00000508531 PHLDA3Q9Y5J5 127 aa3.3□□□□□ -1.88
PDLIM5-211ENST00000508531 FER1L5A0AVI2 2057 aa3.3□□□□□ -1.88
PDLIM5-211ENST00000508531 TRAV13-2A0A0B4J235 113 aa3.29□□□□□ -1.88
PDLIM5-211ENST00000508531 TRAV26-2A0A0B4J265 109 aa3.29□□□□□ -1.88
PDLIM5-211ENST00000508531 IGHV1-58A0A0C4DH39 117 aa3.29□□□□□ -1.88
PDLIM5-211ENST00000508531 TRBV27A0A0K0K1C4 114 aa3.29□□□□□ -1.88
PDLIM5-211ENST00000508531 H3BQ85 93 aa3.29□□□□□ -1.88
PDLIM5-211ENST00000508531 CCL21O00585 134 aa3.29□□□□□ -1.88
PDLIM5-211ENST00000508531 LY6G6DO95868 133 aa3.29□□□□□ -1.88
PDLIM5-211ENST00000508531 IGLV2-23P01705 113 aa3.29□□□□□ -1.88
PDLIM5-211ENST00000508531 PRR15Q8IV56 129 aa3.29□□□□□ -1.88
PDLIM5-211ENST00000508531 LY6G5BQ8NDX9 201 aa3.29□□□□□ -1.88
PDLIM5-211ENST00000508531 BRK1Q8WUW1 75 aa3.29□□□□□ -1.88
PDLIM5-211ENST00000508531 CCL13Q99616 98 aa3.29□□□□□ -1.88
PDLIM5-211ENST00000508531 SIRPDQ9H106 197 aa3.29□□□□□ -1.88
PDLIM5-211ENST00000508531 UBE2D4Q9Y2X8 147 aa3.29□□□□□ -1.88
PDLIM5-211ENST00000508531 ZNF407Q9C0G0 2248 aa3.28□□□□□ -1.88
PDLIM5-211ENST00000508531 IGKV2-40A0A087WW87 121 aaPredicted RBP3.28□□□□□ -1.88
PDLIM5-211ENST00000508531 IGHV7-4-1A0A0J9YVY3 117 aa3.28□□□□□ -1.88
PDLIM5-211ENST00000508531 PLAC8L1A1L4L8 177 aa3.28□□□□□ -1.88
PDLIM5-211ENST00000508531 ERC2-IT1O76042 136 aa3.28□□□□□ -1.88
PDLIM5-211ENST00000508531 IGKV2D-40P01614 121 aaPredicted RBP3.28□□□□□ -1.88
PDLIM5-211ENST00000508531 GATA1P15976 413 aaPredicted RBP3.28□□□□□ -1.88
PDLIM5-211ENST00000508531 LOXP28300 417 aaPredicted RBP3.28□□□□□ -1.88
PDLIM5-211ENST00000508531 XCL1P47992 114 aa3.28□□□□□ -1.88
PDLIM5-211ENST00000508531 POLR2KP53803 58 aaKnown RBP3.28□□□□□ -1.88
PDLIM5-211ENST00000508531 HCP5Q6MZN7 132 aa3.28□□□□□ -1.88
PDLIM5-211ENST00000508531 Q6ZRU5 148 aa3.28□□□□□ -1.88
PDLIM5-211ENST00000508531 ZNRF1Q8ND25 227 aa3.28□□□□□ -1.88
PDLIM5-211ENST00000508531 WFDC11Q8NEX6 87 aa3.28□□□□□ -1.88
PDLIM5-211ENST00000508531 SMCR5Q8TEV8 140 aa3.28□□□□□ -1.88
PDLIM5-211ENST00000508531 PRAC1Q96KF2 57 aa3.28□□□□□ -1.88
PDLIM5-211ENST00000508531 UBL5Q9BZL1 73 aa3.28□□□□□ -1.88
PDLIM5-211ENST00000508531 C11orf68Q9H3H3 251 aaKnown RBP3.28□□□□□ -1.88
PDLIM5-211ENST00000508531 MRPL36Q9P0J6 103 aaKnown RBP3.28□□□□□ -1.88
PDLIM5-211ENST00000508531 XCL2Q9UBD3 114 aa3.28□□□□□ -1.88
PDLIM5-211ENST00000508531 NDUFA12Q9UI09 145 aa3.28□□□□□ -1.88
PDLIM5-211ENST00000508531 FLNAP21333 2647 aaKnown RBP3.28□□□□□ -1.88
PDLIM5-211ENST00000508531 OBSCNQ5VST9 7968 aa3.27□□□□□ -1.89
PDLIM5-211ENST00000508531 IGHV1-3A0A0C4DH29 117 aa3.27□□□□□ -1.89
PDLIM5-211ENST00000508531 NDUFA1O15239 70 aa3.27□□□□□ -1.89
PDLIM5-211ENST00000508531 NDUFB3O43676 98 aa3.27□□□□□ -1.89
PDLIM5-211ENST00000508531 TRGV3P03979 118 aa3.27□□□□□ -1.89
PDLIM5-211ENST00000508531 MGPP08493 103 aa3.27□□□□□ -1.89
PDLIM5-211ENST00000508531 IGHV3-30-3P0DP02 117 aa3.27□□□□□ -1.89
PDLIM5-211ENST00000508531 PDE6GP18545 87 aa3.27□□□□□ -1.89
PDLIM5-211ENST00000508531 RNASE4P34096 147 aaKnown RBP3.27□□□□□ -1.89
PDLIM5-211ENST00000508531 MAGEA5P43359 124 aa3.27□□□□□ -1.89
PDLIM5-211ENST00000508531 TSPEAR-AS2P59090 65 aa3.27□□□□□ -1.89
PDLIM5-211ENST00000508531 BLCAPP62952 87 aa3.27□□□□□ -1.89
PDLIM5-211ENST00000508531 RBM3P98179 157 aaKnown RBP3.27□□□□□ -1.89
PDLIM5-211ENST00000508531 MRPL55Q7Z7F7 128 aaKnown RBP3.27□□□□□ -1.89
PDLIM5-211ENST00000508531 CLEC2BQ92478 149 aa3.27□□□□□ -1.89
PDLIM5-211ENST00000508531 IGHV3OR16-10A0A075B7F0 116 aa3.26□□□□□ -1.89
PDLIM5-211ENST00000508531 A0A0U1RRA0 63 aa3.26□□□□□ -1.89
PDLIM5-211ENST00000508531 H7BZZ5 65 aa3.26□□□□□ -1.89
PDLIM5-211ENST00000508531 K7EIM0 57 aa3.26□□□□□ -1.89
PDLIM5-211ENST00000508531 M0R1W7 72 aa3.26□□□□□ -1.89
PDLIM5-211ENST00000508531 OXTP01178 125 aa3.26□□□□□ -1.89
PDLIM5-211ENST00000508531 RPL28P46779 137 aaKnown RBP3.26□□□□□ -1.89
PDLIM5-211ENST00000508531 C10orf55Q5SWW7 151 aa3.26□□□□□ -1.89
PDLIM5-211ENST00000508531 C20orf197Q8N268 126 aa3.26□□□□□ -1.89
PDLIM5-211ENST00000508531 C14orf178Q8N769 122 aaPredicted RBP3.26□□□□□ -1.89
PDLIM5-211ENST00000508531 Q8TAT8 98 aa3.26□□□□□ -1.89
PDLIM5-211ENST00000508531 LEAP2Q969E1 77 aa3.26□□□□□ -1.89
PDLIM5-211ENST00000508531 EEF1AKMT3Q96AZ1 226 aa3.26□□□□□ -1.89
PDLIM5-211ENST00000508531 OBSCN-AS1Q96MR7 158 aa3.26□□□□□ -1.89
PDLIM5-211ENST00000508531 GAFA1Q96PS6 74 aa3.26□□□□□ -1.89
PDLIM5-211ENST00000508531 MOB4Q9Y3A3 225 aa3.26□□□□□ -1.89
PDLIM5-211ENST00000508531 NSD1Q96L73 2696 aaPredicted RBP3.26□□□□□ -1.89
PDLIM5-211ENST00000508531 PKD1L1Q8TDX9 2849 aa3.25□□□□□ -1.89
PDLIM5-211ENST00000508531 TLN2Q9Y4G6 2542 aa3.25□□□□□ -1.89
PDLIM5-211ENST00000508531 IGLV3-9A0A075B6K5 115 aa3.25□□□□□ -1.89
PDLIM5-211ENST00000508531 E7EUB6 86 aa3.25□□□□□ -1.89
PDLIM5-211ENST00000508531 IGHV3-48P01763 117 aa3.25□□□□□ -1.89
PDLIM5-211ENST00000508531 CRPP02741 224 aa3.25□□□□□ -1.89
PDLIM5-211ENST00000508531 CCKP06307 115 aa3.25□□□□□ -1.89
PDLIM5-211ENST00000508531 LYPD5Q6UWN5 251 aa3.25□□□□□ -1.89
PDLIM5-211ENST00000508531 LINC01561Q8N1V8 128 aa3.25□□□□□ -1.89
PDLIM5-211ENST00000508531 C20orf203Q8NBC4 194 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms