RNA–Protein interactions for RNA: ENST00000503341.1

ARHGEF28-205, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 2

Gene ARHGEF28, Length 1,926 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-205ENST00000503341 ICOSQ9Y6W8 199 aa13.18□□□□□ -0.3
ARHGEF28-205ENST00000503341 IGKV3OR2-268A0A0C4DH90 116 aa13.17□□□□□ -0.3
ARHGEF28-205ENST00000503341 A0A1B0GWB2 263 aa13.17□□□□□ -0.3
ARHGEF28-205ENST00000503341 COL6A5A8TX70 2615 aa13.17□□□□□ -0.3
ARHGEF28-205ENST00000503341 SH2D6Q7Z4S9 175 aa13.17□□□□□ -0.3
ARHGEF28-205ENST00000503341 H3BUT2 72 aa13.16□□□□□ -0.3
ARHGEF28-205ENST00000503341 PRB2P02812 416 aaPredicted RBP13.15□□□□□ -0.3
ARHGEF28-205ENST00000503341 LINC00959A0A1B0GUT2 108 aa13.15□□□□□ -0.3
ARHGEF28-205ENST00000503341 TMEM238LA0A1B0GVL6 79 aa13.15□□□□□ -0.3
ARHGEF28-205ENST00000503341 A6NJY4 79 aa13.15□□□□□ -0.3
ARHGEF28-205ENST00000503341 TMEM238C9JI98 176 aa13.15□□□□□ -0.3
ARHGEF28-205ENST00000503341 UBE2V1Q13404 147 aa13.15□□□□□ -0.3
ARHGEF28-205ENST00000503341 LITAFQ99732 161 aa13.15□□□□□ -0.3
ARHGEF28-205ENST00000503341 NAA38Q9BRA0 125 aaKnown RBP13.15□□□□□ -0.3
ARHGEF28-205ENST00000503341 PKD1L1Q8TDX9 2849 aa13.14□□□□□ -0.31
ARHGEF28-205ENST00000503341 NDUFA1O15239 70 aa13.14□□□□□ -0.31
ARHGEF28-205ENST00000503341 A0A0J9YWU9 116 aa13.13□□□□□ -0.31
ARHGEF28-205ENST00000503341 MDFIQ99750 246 aa13.13□□□□□ -0.31
ARHGEF28-205ENST00000503341 IGHV3OR16-9A0A0B4J2B5 98 aa13.13□□□□□ -0.31
ARHGEF28-205ENST00000503341 Q6ZTC4 211 aa13.13□□□□□ -0.31
ARHGEF28-205ENST00000503341 H3BNG1 76 aa13.12□□□□□ -0.31
ARHGEF28-205ENST00000503341 K7EIL1 84 aa13.12□□□□□ -0.31
ARHGEF28-205ENST00000503341 CCL25O15444 150 aa13.12□□□□□ -0.31
ARHGEF28-205ENST00000503341 LELP1Q5T871 98 aa13.12□□□□□ -0.31
ARHGEF28-205ENST00000503341 A0A1W2PPM0 123 aa13.1□□□□□ -0.31
ARHGEF28-205ENST00000503341 ADAMTSL4-AS1Q5T5F5 129 aa13.1□□□□□ -0.31
ARHGEF28-205ENST00000503341 KPRPQ5T749 579 aaPredicted RBP13.1□□□□□ -0.31
ARHGEF28-205ENST00000503341 MUSTN1Q8IVN3 82 aa13.1□□□□□ -0.31
ARHGEF28-205ENST00000503341 Q9H8V8 135 aa13.1□□□□□ -0.31
ARHGEF28-205ENST00000503341 IGLL5B9A064 214 aa13.09□□□□□ -0.31
ARHGEF28-205ENST00000503341 TIMM17BO60830 172 aa13.09□□□□□ -0.31
ARHGEF28-205ENST00000503341 DNAH3Q8TD57 4116 aa13.09□□□□□ -0.31
ARHGEF28-205ENST00000503341 A0A087WZ39 114 aa13.09□□□□□ -0.31
ARHGEF28-205ENST00000503341 SS18Q15532 418 aa13.09□□□□□ -0.31
ARHGEF28-205ENST00000503341 LYPD5Q6UWN5 251 aa13.09□□□□□ -0.31
ARHGEF28-205ENST00000503341 Q8N3U1 123 aa13.09□□□□□ -0.31
ARHGEF28-205ENST00000503341 SPANXDQ9BXN6 97 aa13.09□□□□□ -0.31
ARHGEF28-205ENST00000503341 SPANXCQ9NY87 97 aa13.09□□□□□ -0.31
ARHGEF28-205ENST00000503341 C11orf45Q8TAV5 145 aa13.08□□□□□ -0.32
ARHGEF28-205ENST00000503341 ZNF625Q96I27 306 aaPredicted RBP13.08□□□□□ -0.32
ARHGEF28-205ENST00000503341 SPATA25Q9BR10 227 aa13.08□□□□□ -0.32
ARHGEF28-205ENST00000503341 NANOS2P60321 138 aaKnown RBP13.07□□□□□ -0.32
ARHGEF28-205ENST00000503341 CLPSL2Q6UWE3 100 aa13.07□□□□□ -0.32
ARHGEF28-205ENST00000503341 LINC00269Q8N2A0 174 aa13.07□□□□□ -0.32
ARHGEF28-205ENST00000503341 TM2D3Q9BRN9 247 aa13.07□□□□□ -0.32
ARHGEF28-205ENST00000503341 A4D1N5 150 aa13.07□□□□□ -0.32
ARHGEF28-205ENST00000503341 APOMO95445 188 aa13.07□□□□□ -0.32
ARHGEF28-205ENST00000503341 CFC1BP0CG36 223 aa13.07□□□□□ -0.32
ARHGEF28-205ENST00000503341 CFC1P0CG37 223 aa13.07□□□□□ -0.32
ARHGEF28-205ENST00000503341 RPL24P83731 157 aaKnown RBP13.07□□□□□ -0.32
ARHGEF28-205ENST00000503341 DEFB121Q5J5C9 76 aa13.07□□□□□ -0.32
ARHGEF28-205ENST00000503341 ANGP03950 147 aaKnown RBP13.06□□□□□ -0.32
ARHGEF28-205ENST00000503341 MIAQ16674 131 aa13.06□□□□□ -0.32
ARHGEF28-205ENST00000503341 C5orf38Q86SI9 138 aa13.06□□□□□ -0.32
ARHGEF28-205ENST00000503341 GAGE10A6NGK3 116 aa13.05□□□□□ -0.32
ARHGEF28-205ENST00000503341 FABP2P12104 132 aa13.05□□□□□ -0.32
ARHGEF28-205ENST00000503341 COX7B2Q8TF08 81 aa13.05□□□□□ -0.32
ARHGEF28-205ENST00000503341 PRSS2P07478 247 aa13.05□□□□□ -0.32
ARHGEF28-205ENST00000503341 XCL1P47992 114 aa13.05□□□□□ -0.32
ARHGEF28-205ENST00000503341 HERV-K104P63124 156 aa13.04□□□□□ -0.32
ARHGEF28-205ENST00000503341 REG3AQ06141 175 aa13.04□□□□□ -0.32
ARHGEF28-205ENST00000503341 CIRBPQ14011 172 aaKnown RBP13.04□□□□□ -0.32
ARHGEF28-205ENST00000503341 DEFB131BA0A096LNP1 70 aa13.03□□□□□ -0.32
ARHGEF28-205ENST00000503341 K7EP34 96 aa13.03□□□□□ -0.32
ARHGEF28-205ENST00000503341 MRAPQ8TCY5 172 aa13.03□□□□□ -0.32
ARHGEF28-205ENST00000503341 GTF2H5Q6ZYL4 71 aa13.03□□□□□ -0.32
ARHGEF28-205ENST00000503341 PGPEP1Q9NXJ5 209 aa13.03□□□□□ -0.32
ARHGEF28-205ENST00000503341 TOMM7Q9P0U1 55 aa13.02□□□□□ -0.32
ARHGEF28-205ENST00000503341 SPCS1Q9Y6A9 102 aa13.02□□□□□ -0.32
ARHGEF28-205ENST00000503341 EIF4EBP3O60516 100 aaPredicted RBP13.01□□□□□ -0.33
ARHGEF28-205ENST00000503341 ANK2Q01484 3957 aa13.01□□□□□ -0.33
ARHGEF28-205ENST00000503341 LINC01561Q8N1V8 128 aa13.01□□□□□ -0.33
ARHGEF28-205ENST00000503341 TRAV16A0A0A6YYK6 109 aaPredicted RBP13□□□□□ -0.33
ARHGEF28-205ENST00000503341 A0A0B4J2C4 111 aa13□□□□□ -0.33
ARHGEF28-205ENST00000503341 TSPAN13O95857 204 aa13□□□□□ -0.33
ARHGEF28-205ENST00000503341 IFITM1P13164 125 aa13□□□□□ -0.33
ARHGEF28-205ENST00000503341 CD164L2Q6UWJ8 174 aa13□□□□□ -0.33
ARHGEF28-205ENST00000503341 DAND5Q8N907 189 aa13□□□□□ -0.33
ARHGEF28-205ENST00000503341 CHCHD10Q8WYQ3 142 aaPredicted RBP13□□□□□ -0.33
ARHGEF28-205ENST00000503341 PRO1854Q9UHT4 67 aa13□□□□□ -0.33
ARHGEF28-205ENST00000503341 NPC2P61916 151 aa13□□□□□ -0.33
ARHGEF28-205ENST00000503341 MEIG1Q5JSS6 88 aa12.99□□□□□ -0.33
ARHGEF28-205ENST00000503341 NOTCH1P46531 2555 aa12.99□□□□□ -0.33
ARHGEF28-205ENST00000503341 PRR34Q9NV39 138 aa12.98□□□□□ -0.33
ARHGEF28-205ENST00000503341 IGLV10-54A0A075B6I4 117 aa12.98□□□□□ -0.33
ARHGEF28-205ENST00000503341 A0A0U1RRA0 63 aa12.98□□□□□ -0.33
ARHGEF28-205ENST00000503341 TENM3Q9P273 2699 aa12.98□□□□□ -0.33
ARHGEF28-205ENST00000503341 ESRGQ1W209 222 aa12.97□□□□□ -0.33
ARHGEF28-205ENST00000503341 KLK12Q9UKR0 248 aa12.97□□□□□ -0.33
ARHGEF28-205ENST00000503341 LINC00308Q8TCZ7 52 aa12.96□□□□□ -0.33
ARHGEF28-205ENST00000503341 COX7A2LO14548 114 aa12.96□□□□□ -0.34
ARHGEF28-205ENST00000503341 WFDC10BQ8IUB3 73 aa12.96□□□□□ -0.34
ARHGEF28-205ENST00000503341 IGHV3-33P01772 117 aa12.95□□□□□ -0.34
ARHGEF28-205ENST00000503341 ENHOQ6UWT2 76 aa12.95□□□□□ -0.34
ARHGEF28-205ENST00000503341 TRAV10A0A0B4J240 114 aa12.94□□□□□ -0.34
ARHGEF28-205ENST00000503341 FOXI1Q12951 378 aa12.94□□□□□ -0.34
ARHGEF28-205ENST00000503341 C6orf226Q5I0X4 101 aa12.94□□□□□ -0.34
ARHGEF28-205ENST00000503341 Q8IZM0 81 aa12.94□□□□□ -0.34
ARHGEF28-205ENST00000503341 SFTA2Q6UW10 78 aa12.94□□□□□ -0.34
ARHGEF28-205ENST00000503341 SOSTDC1Q6X4U4 206 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms