RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 SMIM15Q7Z3B0 74 aa10.39□□□□□ -0.75
SCLT1-204ENST00000503215 SDHAF1A6NFY7 115 aa10.38□□□□□ -0.75
SCLT1-204ENST00000503215 CHTF8P0CG12 524 aa10.38□□□□□ -0.75
SCLT1-204ENST00000503215 RPL37AP61513 92 aaKnown RBP10.38□□□□□ -0.75
SCLT1-204ENST00000503215 STPG4Q8N801 248 aa10.38□□□□□ -0.75
SCLT1-204ENST00000503215 C15orf56Q8N910 161 aa10.38□□□□□ -0.75
SCLT1-204ENST00000503215 CCL25O15444 150 aa10.37□□□□□ -0.75
SCLT1-204ENST00000503215 C3orf79P0CE67 100 aa10.37□□□□□ -0.75
SCLT1-204ENST00000503215 BATFQ16520 125 aa10.37□□□□□ -0.75
SCLT1-204ENST00000503215 RNASEKQ6P5S7 137 aaKnown RBP10.37□□□□□ -0.75
SCLT1-204ENST00000503215 ST20Q9HBF5 79 aa10.37□□□□□ -0.75
SCLT1-204ENST00000503215 FAT3Q8TDW7 4589 aa10.36□□□□□ -0.75
SCLT1-204ENST00000503215 FGF6P10767 208 aa10.36□□□□□ -0.75
SCLT1-204ENST00000503215 PMCHP20382 165 aa10.36□□□□□ -0.75
SCLT1-204ENST00000503215 AMMECR1LQ6DCA0 310 aa10.36□□□□□ -0.75
SCLT1-204ENST00000503215 ATP5L2Q7Z4Y8 100 aa10.36□□□□□ -0.75
SCLT1-204ENST00000503215 CHCHD10Q8WYQ3 142 aaPredicted RBP10.36□□□□□ -0.75
SCLT1-204ENST00000503215 RNF185Q96GF1 192 aa10.36□□□□□ -0.75
SCLT1-204ENST00000503215 ALKBH7Q9BT30 221 aaPredicted RBP10.36□□□□□ -0.75
SCLT1-204ENST00000503215 HIGD1CA8MV81 97 aa10.35□□□□□ -0.75
SCLT1-204ENST00000503215 NCR2O95944 276 aa10.35□□□□□ -0.75
SCLT1-204ENST00000503215 APCSP02743 223 aa10.35□□□□□ -0.75
SCLT1-204ENST00000503215 CIRBPQ14011 172 aaKnown RBP10.35□□□□□ -0.75
SCLT1-204ENST00000503215 HIGD2BQ4VC39 106 aa10.35□□□□□ -0.75
SCLT1-204ENST00000503215 CT83Q5H943 113 aa10.35□□□□□ -0.75
SCLT1-204ENST00000503215 TSKUQ8WUA8 353 aa10.35□□□□□ -0.75
SCLT1-204ENST00000503215 AP5S1Q9NUS5 200 aa10.35□□□□□ -0.75
SCLT1-204ENST00000503215 PKHD1L1Q86WI1 4243 aa10.35□□□□□ -0.75
SCLT1-204ENST00000503215 IGHV3-64A0A075B6Q5 118 aa10.34□□□□□ -0.75
SCLT1-204ENST00000503215 TRBV6-5A0A0K0K1A5 114 aa10.34□□□□□ -0.75
SCLT1-204ENST00000503215 I3L3M4 83 aa10.34□□□□□ -0.75
SCLT1-204ENST00000503215 TSHBP01222 138 aa10.34□□□□□ -0.75
SCLT1-204ENST00000503215 A0A1B0GUT8 65 aa10.33□□□□□ -0.76
SCLT1-204ENST00000503215 PMCHL2Q9BQD1 86 aa10.33□□□□□ -0.76
SCLT1-204ENST00000503215 A0A087WYN8 130 aa10.32□□□□□ -0.76
SCLT1-204ENST00000503215 SMKR1H3BMG3 65 aa10.32□□□□□ -0.76
SCLT1-204ENST00000503215 FOXI1Q12951 378 aa10.32□□□□□ -0.76
SCLT1-204ENST00000503215 AMN1Q8IY45 258 aa10.32□□□□□ -0.76
SCLT1-204ENST00000503215 CHCHD1Q96BP2 118 aaKnown RBP10.32□□□□□ -0.76
SCLT1-204ENST00000503215 DPH3Q96FX2 82 aa10.32□□□□□ -0.76
SCLT1-204ENST00000503215 TMEM191AQ9H0A3 160 aa10.32□□□□□ -0.76
SCLT1-204ENST00000503215 H7C423 109 aa10.31□□□□□ -0.76
SCLT1-204ENST00000503215 HSBP1O75506 76 aa10.31□□□□□ -0.76
SCLT1-204ENST00000503215 OXTP01178 125 aa10.31□□□□□ -0.76
SCLT1-204ENST00000503215 POLR2KP53803 58 aaKnown RBP10.31□□□□□ -0.76
SCLT1-204ENST00000503215 C18orf32Q8TCD1 76 aa10.31□□□□□ -0.76
SCLT1-204ENST00000503215 SPACA4Q8TDM5 124 aa10.31□□□□□ -0.76
SCLT1-204ENST00000503215 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.3□□□□□ -0.76
SCLT1-204ENST00000503215 COX6A2Q02221 97 aa10.3□□□□□ -0.76
SCLT1-204ENST00000503215 C21orf62-AS1Q17RA5 79 aa10.3□□□□□ -0.76
SCLT1-204ENST00000503215 CFAP161Q6P656 301 aa10.3□□□□□ -0.76
SCLT1-204ENST00000503215 NUP35Q8NFH5 326 aa10.3□□□□□ -0.76
SCLT1-204ENST00000503215 PRSS3P2Q8NHM4 247 aa10.3□□□□□ -0.76
SCLT1-204ENST00000503215 LINC00526Q96FQ7 95 aa10.3□□□□□ -0.76
SCLT1-204ENST00000503215 XCL1P47992 114 aa10.29□□□□□ -0.76
SCLT1-204ENST00000503215 OR5A1Q8NGJ0 315 aa10.29□□□□□ -0.76
SCLT1-204ENST00000503215 LINC00959A0A1B0GUT2 108 aa10.28□□□□□ -0.76
SCLT1-204ENST00000503215 K7ERU9 68 aa10.28□□□□□ -0.76
SCLT1-204ENST00000503215 MRPL54Q6P161 138 aaKnown RBP10.28□□□□□ -0.76
SCLT1-204ENST00000503215 GVQW2A0A096LPI5 108 aaPredicted RBP10.27□□□□□ -0.76
SCLT1-204ENST00000503215 TRBV27A0A0K0K1C4 114 aa10.27□□□□□ -0.76
SCLT1-204ENST00000503215 NRACQ8N912 160 aa10.27□□□□□ -0.76
SCLT1-204ENST00000503215 MRAP2Q96G30 205 aa10.27□□□□□ -0.76
SCLT1-204ENST00000503215 HSBP1L1C9JCN9 74 aa10.26□□□□□ -0.77
SCLT1-204ENST00000503215 HINT1P49773 126 aaPredicted RBP10.26□□□□□ -0.77
SCLT1-204ENST00000503215 TMEM101Q96IK0 257 aa10.26□□□□□ -0.77
SCLT1-204ENST00000503215 CDC42SE2Q9NRR3 84 aa10.26□□□□□ -0.77
SCLT1-204ENST00000503215 PLAC8Q9NZF1 115 aa10.26□□□□□ -0.77
SCLT1-204ENST00000503215 IGKV2-24A0A0C4DH68 120 aa10.26□□□□□ -0.77
SCLT1-204ENST00000503215 RIGQ13278 110 aa10.26□□□□□ -0.77
SCLT1-204ENST00000503215 VAMP3Q15836 100 aa10.26□□□□□ -0.77
SCLT1-204ENST00000503215 SLC25A34Q6PIV7 304 aa10.26□□□□□ -0.77
SCLT1-204ENST00000503215 SEC11AP67812 179 aa10.25□□□□□ -0.77
SCLT1-204ENST00000503215 MAJINQ3KP22 176 aa10.25□□□□□ -0.77
SCLT1-204ENST00000503215 OCIAD2Q56VL3 154 aa10.25□□□□□ -0.77
SCLT1-204ENST00000503215 A0A1B0GXF2 115 aa10.24□□□□□ -0.77
SCLT1-204ENST00000503215 MT1HL1P0DM35 61 aa10.24□□□□□ -0.77
SCLT1-204ENST00000503215 MRPL51Q4U2R6 128 aaKnown RBP10.24□□□□□ -0.77
SCLT1-204ENST00000503215 RNASE13Q5GAN3 156 aaKnown RBP10.24□□□□□ -0.77
SCLT1-204ENST00000503215 CST9LQ9H4G1 147 aa10.24□□□□□ -0.77
SCLT1-204ENST00000503215 A0A096LNI7 61 aa10.23□□□□□ -0.77
SCLT1-204ENST00000503215 VCYO14598 125 aa10.23□□□□□ -0.77
SCLT1-204ENST00000503215 HSPB8Q9UJY1 196 aa10.23□□□□□ -0.77
SCLT1-204ENST00000503215 CHTOPQ9Y3Y2 248 aaKnown RBP10.23□□□□□ -0.77
SCLT1-204ENST00000503215 TAX1BP3O14907 124 aa10.22□□□□□ -0.77
SCLT1-204ENST00000503215 CAMPP49913 170 aa10.22□□□□□ -0.77
SCLT1-204ENST00000503215 SUMO2P61956 95 aaKnown RBP10.22□□□□□ -0.77
SCLT1-204ENST00000503215 SS18Q15532 418 aa10.22□□□□□ -0.77
SCLT1-204ENST00000503215 KIAA1644Q3SXP7 199 aa10.22□□□□□ -0.77
SCLT1-204ENST00000503215 BVES-AS1Q5T3Y7 98 aa10.22□□□□□ -0.77
SCLT1-204ENST00000503215 FAM104BQ5XKR9 115 aa10.22□□□□□ -0.77
SCLT1-204ENST00000503215 HMCN2Q8NDA2 5059 aa10.22□□□□□ -0.77
SCLT1-204ENST00000503215 IGHV1-58A0A0C4DH39 117 aa10.21□□□□□ -0.78
SCLT1-204ENST00000503215 SYS1-DBNDD2H3BUS1 97 aa10.21□□□□□ -0.78
SCLT1-204ENST00000503215 LCE2BO14633 110 aa10.21□□□□□ -0.78
SCLT1-204ENST00000503215 FCER1GP30273 86 aa10.21□□□□□ -0.78
SCLT1-204ENST00000503215 HBBP68871 147 aa10.21□□□□□ -0.78
SCLT1-204ENST00000503215 SERTAD4-AS1Q5TG53 156 aa10.21□□□□□ -0.78
SCLT1-204ENST00000503215 CD164L2Q6UWJ8 174 aa10.21□□□□□ -0.78
SCLT1-204ENST00000503215 GTF2H5Q6ZYL4 71 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms