RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 IGKV3-11P04433 115 aa2.34□□□□□ -2.04
SUB1-202ENST00000502453 CDC42SE2Q9NRR3 84 aa2.34□□□□□ -2.04
SUB1-202ENST00000502453 CXorf51AA0A1B0GTR3 108 aa2.33□□□□□ -2.04
SUB1-202ENST00000502453 H3BVH4 76 aa2.33□□□□□ -2.04
SUB1-202ENST00000502453 KLK12Q9UKR0 248 aa2.33□□□□□ -2.04
SUB1-202ENST00000502453 KRTAP29-1A8MX34 341 aaPredicted RBP2.33□□□□□ -2.04
SUB1-202ENST00000502453 RTL8CO15255 209 aa2.33□□□□□ -2.04
SUB1-202ENST00000502453 TRBV10-3A0A0K0K1G6 114 aa2.33□□□□□ -2.04
SUB1-202ENST00000502453 BAALC-AS2P0C853 105 aa2.33□□□□□ -2.04
SUB1-202ENST00000502453 HEATR1Q9H583 2144 aaKnown RBP2.32□□□□□ -2.04
SUB1-202ENST00000502453 A0A1B0GU33 70 aa2.32□□□□□ -2.04
SUB1-202ENST00000502453 DEFB106AQ8N104 65 aa2.32□□□□□ -2.04
SUB1-202ENST00000502453 CYYR1Q96J86 154 aa2.32□□□□□ -2.04
SUB1-202ENST00000502453 CTXND1A0A1B0GTU2 59 aa2.32□□□□□ -2.04
SUB1-202ENST00000502453 COX6CP09669 75 aa2.32□□□□□ -2.04
SUB1-202ENST00000502453 IFI27P40305 119 aaPredicted RBP2.32□□□□□ -2.04
SUB1-202ENST00000502453 SPINT3P49223 89 aa2.32□□□□□ -2.04
SUB1-202ENST00000502453 KPRPQ5T749 579 aaPredicted RBP2.32□□□□□ -2.04
SUB1-202ENST00000502453 ZNF563Q8TA94 476 aa2.32□□□□□ -2.04
SUB1-202ENST00000502453 HIGD2AQ9BW72 106 aa2.32□□□□□ -2.04
SUB1-202ENST00000502453 TMEM14BQ9NUH8 114 aa2.32□□□□□ -2.04
SUB1-202ENST00000502453 FREM3P0C091 2139 aa2.32□□□□□ -2.04
SUB1-202ENST00000502453 LEPROTL1O95214 131 aa2.32□□□□□ -2.04
SUB1-202ENST00000502453 PPYP01298 95 aa2.32□□□□□ -2.04
SUB1-202ENST00000502453 IGKV3-20P01619 116 aa2.32□□□□□ -2.04
SUB1-202ENST00000502453 Q6ZR54 194 aa2.32□□□□□ -2.04
SUB1-202ENST00000502453 KRTAP7-1Q8IUC3 87 aa2.32□□□□□ -2.04
SUB1-202ENST00000502453 C10orf128Q5T292 105 aa2.31□□□□□ -2.04
SUB1-202ENST00000502453 TMEM167BQ9NRX6 74 aa2.31□□□□□ -2.04
SUB1-202ENST00000502453 ZNF292O60281 2723 aa2.31□□□□□ -2.04
SUB1-202ENST00000502453 IGLV10-54A0A075B6I4 117 aa2.31□□□□□ -2.04
SUB1-202ENST00000502453 LOC101927531A0A1B0GV80 90 aa2.31□□□□□ -2.04
SUB1-202ENST00000502453 CLPSL1A2RUU4 121 aa2.31□□□□□ -2.04
SUB1-202ENST00000502453 IFI6P09912 130 aa2.31□□□□□ -2.04
SUB1-202ENST00000502453 PLGLAQ15195 96 aa2.31□□□□□ -2.04
SUB1-202ENST00000502453 KIAA0100Q14667 2235 aaKnown RBP2.31□□□□□ -2.04
SUB1-202ENST00000502453 LOC730098B7Z3J9 87 aa2.31□□□□□ -2.04
SUB1-202ENST00000502453 K7EMI3 77 aa2.31□□□□□ -2.04
SUB1-202ENST00000502453 C2orf82Q6UX34 121 aa2.31□□□□□ -2.04
SUB1-202ENST00000502453 IGHV3OR16-8A0A075B7F1 116 aa2.31□□□□□ -2.04
SUB1-202ENST00000502453 TRBV7-4A0A0J9YYF1 115 aa2.31□□□□□ -2.04
SUB1-202ENST00000502453 TMEM14DPA8MWL7 114 aa2.31□□□□□ -2.04
SUB1-202ENST00000502453 PSCAO43653 123 aa2.31□□□□□ -2.04
SUB1-202ENST00000502453 PPP1R17O96001 155 aa2.31□□□□□ -2.04
SUB1-202ENST00000502453 TCF20Q9UGU0 1960 aaKnown RBP2.3□□□□□ -2.04
SUB1-202ENST00000502453 BAZ2BQ9UIF8 2168 aaKnown RBP2.3□□□□□ -2.04
SUB1-202ENST00000502453 IGLV2-18A0A075B6J9 118 aa2.3□□□□□ -2.04
SUB1-202ENST00000502453 A0A087WSZ3 146 aa2.3□□□□□ -2.04
SUB1-202ENST00000502453 CUBNO60494 3623 aa2.3□□□□□ -2.04
SUB1-202ENST00000502453 IGLV3-16A0A075B6K0 115 aa2.3□□□□□ -2.04
SUB1-202ENST00000502453 ZNF818PQ6ZRF7 136 aa2.3□□□□□ -2.04
SUB1-202ENST00000502453 R4GN34 69 aa2.3□□□□□ -2.04
SUB1-202ENST00000502453 MYO7AQ13402 2215 aa2.3□□□□□ -2.04
SUB1-202ENST00000502453 CISD3P0C7P0 127 aa2.29□□□□□ -2.04
SUB1-202ENST00000502453 ATXN8Q156A1 80 aa2.29□□□□□ -2.04
SUB1-202ENST00000502453 TNRC6BQ9UPQ9 1833 aaKnown RBP2.29□□□□□ -2.04
SUB1-202ENST00000502453 BOD1L1Q8NFC6 3051 aa2.29□□□□□ -2.04
SUB1-202ENST00000502453 A0A087WVE0 104 aa2.29□□□□□ -2.04
SUB1-202ENST00000502453 CHKB-CPT1BH3BT56 60 aa2.29□□□□□ -2.04
SUB1-202ENST00000502453 KRTAP26-1Q6PEX3 210 aa2.29□□□□□ -2.04
SUB1-202ENST00000502453 UNC13CQ8NB66 2214 aa2.29□□□□□ -2.04
SUB1-202ENST00000502453 CPSF4LA6NMK7 179 aaKnown RBP2.29□□□□□ -2.04
SUB1-202ENST00000502453 EDDM3BP56851 147 aa2.29□□□□□ -2.04
SUB1-202ENST00000502453 LIMD2Q9BT23 127 aa2.29□□□□□ -2.04
SUB1-202ENST00000502453 PRR14LQ5THK1 2151 aa2.29□□□□□ -2.04
SUB1-202ENST00000502453 AKAP13Q12802 2813 aa2.29□□□□□ -2.04
SUB1-202ENST00000502453 COL12A1Q99715 3063 aa2.29□□□□□ -2.04
SUB1-202ENST00000502453 GFRA4Q9GZZ7 299 aa2.28□□□□□ -2.04
SUB1-202ENST00000502453 TENM4Q6N022 2769 aa2.28□□□□□ -2.04
SUB1-202ENST00000502453 ARHGAP32A7KAX9 2087 aa2.28□□□□□ -2.04
SUB1-202ENST00000502453 TRAV12-3A0A0B4J271 114 aa2.28□□□□□ -2.04
SUB1-202ENST00000502453 SPINT4Q6UDR6 99 aa2.28□□□□□ -2.04
SUB1-202ENST00000502453 MYO7BQ6PIF6 2116 aa2.28□□□□□ -2.04
SUB1-202ENST00000502453 COL4A2P08572 1712 aa2.28□□□□□ -2.04
SUB1-202ENST00000502453 KALRNO60229 2985 aa2.28□□□□□ -2.05
SUB1-202ENST00000502453 A0A1W2PNM2 257 aa2.28□□□□□ -2.05
SUB1-202ENST00000502453 CSAG1Q6PB30 78 aa2.28□□□□□ -2.05
SUB1-202ENST00000502453 CRYBG3Q68DQ2 2970 aa2.28□□□□□ -2.05
SUB1-202ENST00000502453 SPAG17Q6Q759 2223 aa2.27□□□□□ -2.05
SUB1-202ENST00000502453 PDE4DIPQ5VU43 2346 aa2.27□□□□□ -2.05
SUB1-202ENST00000502453 DEFB123Q8N688 67 aa2.27□□□□□ -2.05
SUB1-202ENST00000502453 C22orf24Q9Y442 160 aa2.27□□□□□ -2.05
SUB1-202ENST00000502453 SVEP1Q4LDE5 3571 aa2.27□□□□□ -2.05
SUB1-202ENST00000502453 ODF3BA8MYP8 253 aa2.27□□□□□ -2.05
SUB1-202ENST00000502453 SNURFQ9Y675 71 aa2.27□□□□□ -2.05
SUB1-202ENST00000502453 KIF25-AS1Q9Y6Z4 181 aa2.27□□□□□ -2.05
SUB1-202ENST00000502453 TET1Q8NFU7 2136 aa2.27□□□□□ -2.05
SUB1-202ENST00000502453 TRBV6-8A0A0A6YYG3 113 aa2.27□□□□□ -2.05
SUB1-202ENST00000502453 TRAV12-1A0A0B4J245 112 aa2.27□□□□□ -2.05
SUB1-202ENST00000502453 LHFPL6Q9Y693 200 aa2.27□□□□□ -2.05
SUB1-202ENST00000502453 R4GMQ9 66 aa2.27□□□□□ -2.05
SUB1-202ENST00000502453 SPTBP11277 2137 aa2.27□□□□□ -2.05
SUB1-202ENST00000502453 ATP5EP2Q5VTU8 51 aa2.26□□□□□ -2.05
SUB1-202ENST00000502453 C9orf163Q8N9P6 203 aa2.26□□□□□ -2.05
SUB1-202ENST00000502453 PRR34Q9NV39 138 aa2.26□□□□□ -2.05
SUB1-202ENST00000502453 V9GYV3 84 aa2.26□□□□□ -2.05
SUB1-202ENST00000502453 CR1P17927 2039 aa2.26□□□□□ -2.05
SUB1-202ENST00000502453 ARMS2P0C7Q2 107 aa2.26□□□□□ -2.05
SUB1-202ENST00000502453 LCE5AQ5TCM9 118 aa2.26□□□□□ -2.05
SUB1-202ENST00000502453 HMGN4O00479 90 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms