RNA–Protein interactions for RNA: ENST00000497171.1

PHC3-216, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-216ENST00000497171 C2CD3Q4AC94 2353 aa-0.15□□□□□ -2.43
PHC3-216ENST00000497171 CACNA1AO00555 2505 aa-0.15□□□□□ -2.43
PHC3-216ENST00000497171 BTAF1O14981 1849 aa-0.15□□□□□ -2.43
PHC3-216ENST00000497171 CSMD3Q7Z407 3707 aa-0.15□□□□□ -2.43
PHC3-216ENST00000497171 POLA1P09884 1462 aaPredicted RBP-0.16□□□□□ -2.43
PHC3-216ENST00000497171 EPG5Q9HCE0 2579 aa-0.16□□□□□ -2.43
PHC3-216ENST00000497171 NEBP20929 6669 aa-0.16□□□□□ -2.43
PHC3-216ENST00000497171 ARHGEF12Q9NZN5 1544 aa-0.16□□□□□ -2.43
PHC3-216ENST00000497171 F6UZH7 168 aa-0.16□□□□□ -2.44
PHC3-216ENST00000497171 GNG4P50150 75 aa-0.16□□□□□ -2.44
PHC3-216ENST00000497171 SFTA2Q6UW10 78 aa-0.16□□□□□ -2.44
PHC3-216ENST00000497171 FAM223AQ8IWN6 122 aa-0.16□□□□□ -2.44
PHC3-216ENST00000497171 PIEZO2Q9H5I5 2752 aa-0.16□□□□□ -2.44
PHC3-216ENST00000497171 MYOM2P54296 1465 aa-0.16□□□□□ -2.44
PHC3-216ENST00000497171 RAPGEF6Q8TEU7 1601 aa-0.16□□□□□ -2.44
PHC3-216ENST00000497171 DCHS2Q6V1P9 2916 aa-0.17□□□□□ -2.44
PHC3-216ENST00000497171 FAT1Q14517 4588 aa-0.17□□□□□ -2.44
PHC3-216ENST00000497171 MYOM1P52179 1685 aa-0.17□□□□□ -2.44
PHC3-216ENST00000497171 NCOR1O75376 2440 aa-0.17□□□□□ -2.44
PHC3-216ENST00000497171 K7EQZ3 153 aa-0.17□□□□□ -2.44
PHC3-216ENST00000497171 PPP3R1P63098 170 aa-0.17□□□□□ -2.44
PHC3-216ENST00000497171 WHAMMP3Q1A5X7 153 aa-0.17□□□□□ -2.44
PHC3-216ENST00000497171 TMEM263Q8WUH6 116 aaKnown RBP-0.17□□□□□ -2.44
PHC3-216ENST00000497171 FXYD6Q9H0Q3 95 aa-0.17□□□□□ -2.44
PHC3-216ENST00000497171 ITPR3Q14573 2671 aa-0.17□□□□□ -2.44
PHC3-216ENST00000497171 SHROOM2Q13796 1616 aa-0.17□□□□□ -2.44
PHC3-216ENST00000497171 USF3Q68DE3 2245 aa-0.18□□□□□ -2.44
PHC3-216ENST00000497171 HMCN2Q8NDA2 5059 aa-0.18□□□□□ -2.44
PHC3-216ENST00000497171 SCAPERQ9BY12 1400 aa-0.18□□□□□ -2.44
PHC3-216ENST00000497171 TENM2Q9NT68 2774 aa-0.18□□□□□ -2.44
PHC3-216ENST00000497171 TRAPPC2P0DI81 140 aa-0.18□□□□□ -2.44
PHC3-216ENST00000497171 TRAPPC2BP0DI82 140 aa-0.18□□□□□ -2.44
PHC3-216ENST00000497171 COX6B1P14854 86 aa-0.18□□□□□ -2.44
PHC3-216ENST00000497171 MT4P47944 62 aa-0.18□□□□□ -2.44
PHC3-216ENST00000497171 LRP2P98164 4655 aa-0.18□□□□□ -2.44
PHC3-216ENST00000497171 Q0VG73 95 aa-0.18□□□□□ -2.44
PHC3-216ENST00000497171 C10orf113Q5VZT2 155 aa-0.18□□□□□ -2.44
PHC3-216ENST00000497171 CDC42SE2Q9NRR3 84 aa-0.18□□□□□ -2.44
PHC3-216ENST00000497171 GNG8Q9UK08 70 aa-0.18□□□□□ -2.44
PHC3-216ENST00000497171 WDR7Q9Y4E6 1490 aa-0.18□□□□□ -2.44
PHC3-216ENST00000497171 DSPP15924 2871 aaKnown RBP-0.18□□□□□ -2.44
PHC3-216ENST00000497171 LAMA2P24043 3122 aaKnown RBP-0.18□□□□□ -2.44
PHC3-216ENST00000497171 MAP1AP78559 2803 aaPredicted RBP-0.19□□□□□ -2.44
PHC3-216ENST00000497171 MYO7BQ6PIF6 2116 aa-0.19□□□□□ -2.44
PHC3-216ENST00000497171 CHD6Q8TD26 2715 aa-0.19□□□□□ -2.44
PHC3-216ENST00000497171 SMG6Q86US8 1419 aaKnown RBP-0.19□□□□□ -2.44
PHC3-216ENST00000497171 CORTO00230 105 aa-0.19□□□□□ -2.44
PHC3-216ENST00000497171 KRTAP19-7Q3SYF9 63 aa-0.19□□□□□ -2.44
PHC3-216ENST00000497171 TNXBP22105 4242 aa-0.19□□□□□ -2.44
PHC3-216ENST00000497171 UBR4Q5T4S7 5183 aa-0.19□□□□□ -2.44
PHC3-216ENST00000497171 USP9XQ93008 2570 aaPredicted RBP-0.19□□□□□ -2.44
PHC3-216ENST00000497171 MXRA5Q9NR99 2828 aa-0.19□□□□□ -2.44
PHC3-216ENST00000497171 ARHGEF5Q12774 1597 aa-0.19□□□□□ -2.44
PHC3-216ENST00000497171 PRRC2CQ9Y520 2896 aaKnown RBP-0.2□□□□□ -2.44
PHC3-216ENST00000497171 KIAA1109Q2LD37 5005 aa-0.2□□□□□ -2.44
PHC3-216ENST00000497171 TSC2P49815 1807 aa-0.2□□□□□ -2.44
PHC3-216ENST00000497171 MAP1BP46821 2468 aaKnown RBP-0.2□□□□□ -2.44
PHC3-216ENST00000497171 NSD3Q9BZ95 1437 aa-0.2□□□□□ -2.44
PHC3-216ENST00000497171 FLNBO75369 2602 aaKnown RBP-0.2□□□□□ -2.44
PHC3-216ENST00000497171 ACANP16112 2415 aa-0.2□□□□□ -2.44
PHC3-216ENST00000497171 NAP1L6A6NFF2 107 aa-0.2□□□□□ -2.44
PHC3-216ENST00000497171 PRM1P04553 51 aa-0.2□□□□□ -2.44
PHC3-216ENST00000497171 FAM167A-AS1Q96KT0 104 aa-0.2□□□□□ -2.44
PHC3-216ENST00000497171 IER3IP1Q9Y5U9 82 aa-0.2□□□□□ -2.44
PHC3-216ENST00000497171 RYR3Q15413 4870 aa-0.2□□□□□ -2.44
PHC3-216ENST00000497171 HYDINQ4G0P3 5121 aa-0.2□□□□□ -2.44
PHC3-216ENST00000497171 COL6A3P12111 3177 aa-0.2□□□□□ -2.44
PHC3-216ENST00000497171 RYR1P21817 5038 aa-0.21□□□□□ -2.44
PHC3-216ENST00000497171 A0A1B0GWA3 101 aa-0.21□□□□□ -2.44
PHC3-216ENST00000497171 LOC730098B7Z3J9 87 aa-0.21□□□□□ -2.44
PHC3-216ENST00000497171 SPRR1BP22528 89 aa-0.21□□□□□ -2.44
PHC3-216ENST00000497171 SNCAP37840 140 aa-0.21□□□□□ -2.44
PHC3-216ENST00000497171 SPRR4Q96PI1 79 aa-0.21□□□□□ -2.44
PHC3-216ENST00000497171 TGP01266 2768 aa-0.21□□□□□ -2.44
PHC3-216ENST00000497171 USH2AO75445 5202 aa-0.21□□□□□ -2.44
PHC3-216ENST00000497171 EP300Q09472 2414 aaPredicted RBP-0.22□□□□□ -2.44
PHC3-216ENST00000497171 EIF4G3O43432 1585 aaKnown RBP-0.22□□□□□ -2.44
PHC3-216ENST00000497171 ATRQ13535 2644 aa-0.22□□□□□ -2.44
PHC3-216ENST00000497171 TRBV7-4A0A0J9YYF1 115 aa-0.22□□□□□ -2.44
PHC3-216ENST00000497171 COX6CP09669 75 aa-0.22□□□□□ -2.44
PHC3-216ENST00000497171 SPRR2DP22532 72 aa-0.22□□□□□ -2.44
PHC3-216ENST00000497171 KRTAP19-8Q3LI54 63 aa-0.22□□□□□ -2.44
PHC3-216ENST00000497171 TMEM203Q969S6 136 aa-0.22□□□□□ -2.44
PHC3-216ENST00000497171 C12orf57Q99622 126 aa-0.22□□□□□ -2.44
PHC3-216ENST00000497171 PRO1933Q9H354 126 aa-0.22□□□□□ -2.44
PHC3-216ENST00000497171 PRO1854Q9UHT4 67 aa-0.22□□□□□ -2.44
PHC3-216ENST00000497171 WNK1Q9H4A3 2382 aa-0.22□□□□□ -2.44
PHC3-216ENST00000497171 TET3O43151 1660 aa-0.22□□□□□ -2.44
PHC3-216ENST00000497171 PKD1L1Q8TDX9 2849 aa-0.22□□□□□ -2.44
PHC3-216ENST00000497171 HERC2O95714 4834 aa-0.22□□□□□ -2.44
PHC3-216ENST00000497171 VWFP04275 2813 aa-0.23□□□□□ -2.45
PHC3-216ENST00000497171 HMGXB3Q12766 1538 aa-0.23□□□□□ -2.45
PHC3-216ENST00000497171 CRYM-AS1A6NIL9 109 aa-0.23□□□□□ -2.45
PHC3-216ENST00000497171 FAM223BA6NKX1 122 aa-0.23□□□□□ -2.45
PHC3-216ENST00000497171 SPRR2BP35325 72 aa-0.23□□□□□ -2.45
PHC3-216ENST00000497171 MRPS10P82664 201 aaKnown RBP-0.23□□□□□ -2.45
PHC3-216ENST00000497171 GTF2H5Q6ZYL4 71 aa-0.23□□□□□ -2.45
PHC3-216ENST00000497171 HSPG2P98160 4391 aa-0.23□□□□□ -2.45
PHC3-216ENST00000497171 WDR87Q6ZQQ6 2873 aa-0.23□□□□□ -2.45
PHC3-216ENST00000497171 EPPK1P58107 5090 aaKnown RBP-0.23□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms