RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 PACRGQ96M98 296 aaPredicted RBP12.13□□□□□ -0.47
TSSC4-210ENST00000496468 USP17L23D6RBM5 183 aa12.12□□□□□ -0.47
TSSC4-210ENST00000496468 WFDC2Q14508 124 aa12.12□□□□□ -0.47
TSSC4-210ENST00000496468 FAM19A3Q7Z5A8 133 aa12.12□□□□□ -0.47
TSSC4-210ENST00000496468 GEMIN7Q9H840 131 aaKnown RBP12.12□□□□□ -0.47
TSSC4-210ENST00000496468 A0A0J9YXV3 536 aa12.11□□□□□ -0.47
TSSC4-210ENST00000496468 H0Y8G0 127 aa12.11□□□□□ -0.47
TSSC4-210ENST00000496468 HERVK_113P63121 156 aa12.11□□□□□ -0.47
TSSC4-210ENST00000496468 TRAV12-1A0A0B4J245 112 aa12.1□□□□□ -0.47
TSSC4-210ENST00000496468 IGHV3OR16-9A0A0B4J2B5 98 aa12.1□□□□□ -0.47
TSSC4-210ENST00000496468 TINCRA0A1B0GVN0 87 aa12.1□□□□□ -0.47
TSSC4-210ENST00000496468 MALP21145 153 aa12.1□□□□□ -0.47
TSSC4-210ENST00000496468 C14orf177Q52M58 125 aa12.1□□□□□ -0.47
TSSC4-210ENST00000496468 C5orf38Q86SI9 138 aa12.1□□□□□ -0.47
TSSC4-210ENST00000496468 COX6A2Q02221 97 aa12.09□□□□□ -0.47
TSSC4-210ENST00000496468 CFAP161Q6P656 301 aa12.09□□□□□ -0.47
TSSC4-210ENST00000496468 CHAC1Q9BUX1 264 aa12.09□□□□□ -0.47
TSSC4-210ENST00000496468 MAP1LC3CQ9BXW4 147 aa12.09□□□□□ -0.47
TSSC4-210ENST00000496468 IGHV1-58A0A0C4DH39 117 aa12.08□□□□□ -0.48
TSSC4-210ENST00000496468 IGLC3P0DOY3 106 aa12.08□□□□□ -0.48
TSSC4-210ENST00000496468 S100A2P29034 98 aa12.08□□□□□ -0.48
TSSC4-210ENST00000496468 HIST3H2BBQ8N257 126 aa12.08□□□□□ -0.48
TSSC4-210ENST00000496468 LINC00469Q8N7U9 141 aa12.08□□□□□ -0.48
TSSC4-210ENST00000496468 Q8N814 137 aa12.08□□□□□ -0.48
TSSC4-210ENST00000496468 C15orf56Q8N910 161 aa12.08□□□□□ -0.48
TSSC4-210ENST00000496468 CHTOPQ9Y3Y2 248 aaKnown RBP12.08□□□□□ -0.48
TSSC4-210ENST00000496468 DNAH11Q96DT5 4516 aa12.07□□□□□ -0.48
TSSC4-210ENST00000496468 IGLV4-69A0A075B6H9 119 aa12.07□□□□□ -0.48
TSSC4-210ENST00000496468 A0A087WZ39 114 aa12.06□□□□□ -0.48
TSSC4-210ENST00000496468 F8VRH5 84 aa12.06□□□□□ -0.48
TSSC4-210ENST00000496468 APOMO95445 188 aa12.06□□□□□ -0.48
TSSC4-210ENST00000496468 HECTD4Q9Y4D8 3996 aa12.06□□□□□ -0.48
TSSC4-210ENST00000496468 IGLV5-45A0A087WSX0 123 aa12.05□□□□□ -0.48
TSSC4-210ENST00000496468 hDV102S1A0JD36 115 aa12.05□□□□□ -0.48
TSSC4-210ENST00000496468 SNRPEP62304 92 aaKnown RBP12.05□□□□□ -0.48
TSSC4-210ENST00000496468 ODF1Q14990 250 aa12.05□□□□□ -0.48
TSSC4-210ENST00000496468 HIGD2BQ4VC39 106 aa12.05□□□□□ -0.48
TSSC4-210ENST00000496468 MRPL35Q9NZE8 188 aaKnown RBP12.05□□□□□ -0.48
TSSC4-210ENST00000496468 CDKN2A-AS1Q9UH64 79 aa12.05□□□□□ -0.48
TSSC4-210ENST00000496468 TMA7Q9Y2S6 64 aaKnown RBP12.05□□□□□ -0.48
TSSC4-210ENST00000496468 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.04□□□□□ -0.48
TSSC4-210ENST00000496468 GVQW2A0A096LPI5 108 aaPredicted RBP12.04□□□□□ -0.48
TSSC4-210ENST00000496468 A0A1B0GVY2 172 aa12.04□□□□□ -0.48
TSSC4-210ENST00000496468 PKD1P98161 4303 aa12.04□□□□□ -0.48
TSSC4-210ENST00000496468 C11orf86A6NJI1 115 aa12.03□□□□□ -0.48
TSSC4-210ENST00000496468 H3BRM9 83 aa12.03□□□□□ -0.48
TSSC4-210ENST00000496468 SYS1-DBNDD2H3BUS1 97 aa12.03□□□□□ -0.48
TSSC4-210ENST00000496468 SPATA12Q7Z6I5 190 aa12.03□□□□□ -0.48
TSSC4-210ENST00000496468 LINC01561Q8N1V8 128 aa12.03□□□□□ -0.48
TSSC4-210ENST00000496468 OR10D4PQ8NGN7 298 aa12.03□□□□□ -0.48
TSSC4-210ENST00000496468 ORAOV1Q8WV07 137 aa12.03□□□□□ -0.48
TSSC4-210ENST00000496468 HIST1H2BLQ99880 126 aa12.03□□□□□ -0.48
TSSC4-210ENST00000496468 IGHV3-64A0A075B6Q5 118 aa12.02□□□□□ -0.49
TSSC4-210ENST00000496468 C5orf52A6NGY3 159 aa12.02□□□□□ -0.49
TSSC4-210ENST00000496468 ZNF22P17026 224 aaPredicted RBP12.02□□□□□ -0.49
TSSC4-210ENST00000496468 KRTDAPP60985 99 aa12.02□□□□□ -0.49
TSSC4-210ENST00000496468 SPAG11BQ08648 103 aa12.02□□□□□ -0.49
TSSC4-210ENST00000496468 NTN5Q8WTR8 489 aaPredicted RBP12.02□□□□□ -0.49
TSSC4-210ENST00000496468 C3orf79P0CE67 100 aa12.01□□□□□ -0.49
TSSC4-210ENST00000496468 PLNP26678 52 aa12.01□□□□□ -0.49
TSSC4-210ENST00000496468 TMEM170BQ5T4T1 132 aa12.01□□□□□ -0.49
TSSC4-210ENST00000496468 ZNF561-AS1K7EIQ3 104 aa12□□□□□ -0.49
TSSC4-210ENST00000496468 KRTAP10-2P60368 255 aa12□□□□□ -0.49
TSSC4-210ENST00000496468 PET117Q6UWS5 81 aa12□□□□□ -0.49
TSSC4-210ENST00000496468 PMCHL2Q9BQD1 86 aa12□□□□□ -0.49
TSSC4-210ENST00000496468 IGLV5-52A0A0A0MRZ9 124 aa11.99□□□□□ -0.49
TSSC4-210ENST00000496468 SMIM1B2RUZ4 78 aa11.99□□□□□ -0.49
TSSC4-210ENST00000496468 DPM2O94777 84 aa11.99□□□□□ -0.49
TSSC4-210ENST00000496468 SPINK8P0C7L1 97 aa11.99□□□□□ -0.49
TSSC4-210ENST00000496468 CDPF1Q6NVV7 123 aa11.99□□□□□ -0.49
TSSC4-210ENST00000496468 C20orf202A1L168 122 aa11.97□□□□□ -0.49
TSSC4-210ENST00000496468 IGKCP01834 107 aa11.97□□□□□ -0.49
TSSC4-210ENST00000496468 FUSP35637 526 aaKnown RBP eCLIP11.97□□□□□ -0.49
TSSC4-210ENST00000496468 LINC01545Q5VT33 79 aa11.97□□□□□ -0.49
TSSC4-210ENST00000496468 LINC00526Q96FQ7 95 aa11.97□□□□□ -0.49
TSSC4-210ENST00000496468 DNAH5Q8TE73 4624 aa11.97□□□□□ -0.49
TSSC4-210ENST00000496468 PRSS2P07478 247 aa11.96□□□□□ -0.49
TSSC4-210ENST00000496468 CNBPP62633 177 aaKnown RBP11.96□□□□□ -0.49
TSSC4-210ENST00000496468 PGPEP1Q9NXJ5 209 aa11.96□□□□□ -0.49
TSSC4-210ENST00000496468 TOMM7Q9P0U1 55 aa11.96□□□□□ -0.49
TSSC4-210ENST00000496468 PKHD1P08F94 4074 aa11.95□□□□□ -0.5
TSSC4-210ENST00000496468 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.95□□□□□ -0.5
TSSC4-210ENST00000496468 Q8IZM0 81 aa11.94□□□□□ -0.5
TSSC4-210ENST00000496468 C2orf48Q96LS8 159 aa11.94□□□□□ -0.5
TSSC4-210ENST00000496468 CARD19Q96LW7 228 aa11.94□□□□□ -0.5
TSSC4-210ENST00000496468 CAMK2N2Q96S95 79 aa11.94□□□□□ -0.5
TSSC4-210ENST00000496468 TMEM223A0PJW6 202 aa11.93□□□□□ -0.5
TSSC4-210ENST00000496468 IGLV5-39A0A0G2JS06 123 aa11.92□□□□□ -0.5
TSSC4-210ENST00000496468 C16orf90A8MZG2 172 aa11.92□□□□□ -0.5
TSSC4-210ENST00000496468 NDUFA1O15239 70 aa11.92□□□□□ -0.5
TSSC4-210ENST00000496468 SLPIP03973 132 aa11.92□□□□□ -0.5
TSSC4-210ENST00000496468 SYCNQ0VAF6 134 aa11.92□□□□□ -0.5
TSSC4-210ENST00000496468 KIAA0087Q14695 138 aa11.92□□□□□ -0.5
TSSC4-210ENST00000496468 COX7B2Q8TF08 81 aa11.92□□□□□ -0.5
TSSC4-210ENST00000496468 EPPK1P58107 5090 aaKnown RBP11.92□□□□□ -0.5
TSSC4-210ENST00000496468 F8WDY8 70 aa11.91□□□□□ -0.5
TSSC4-210ENST00000496468 HERVK_113P61574 105 aa11.91□□□□□ -0.5
TSSC4-210ENST00000496468 DYNC1H1Q14204 4646 aaKnown RBP11.91□□□□□ -0.5
TSSC4-210ENST00000496468 CXCL5P42830 114 aa11.9□□□□□ -0.5
TSSC4-210ENST00000496468 CKS1BP61024 79 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 175.9 ms