RNA–Protein interactions for RNA: ENST00000496296.5

FGFR1-223, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 1,898 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-223ENST00000496296 LYRM7Q5U5X0 104 aa14.86□□□□□ -0.03
FGFR1-223ENST00000496296 ZFAND6Q6FIF0 208 aa14.86□□□□□ -0.03
FGFR1-223ENST00000496296 LITAFQ99732 161 aa14.86□□□□□ -0.03
FGFR1-223ENST00000496296 TEX48A0A1B0GUV7 120 aa14.86□□□□□ -0.03
FGFR1-223ENST00000496296 TSPAN13O95857 204 aa14.86□□□□□ -0.03
FGFR1-223ENST00000496296 HERVK_113P63121 156 aa14.86□□□□□ -0.03
FGFR1-223ENST00000496296 RPL24P83731 157 aaKnown RBP14.85□□□□□ -0.03
FGFR1-223ENST00000496296 WFDC2Q14508 124 aa14.85□□□□□ -0.03
FGFR1-223ENST00000496296 SPANXDQ9BXN6 97 aa14.84□□□□□ -0.03
FGFR1-223ENST00000496296 SPANXCQ9NY87 97 aa14.84□□□□□ -0.03
FGFR1-223ENST00000496296 NDUFA12Q9UI09 145 aa14.84□□□□□ -0.03
FGFR1-223ENST00000496296 TIMM17BO60830 172 aa14.84□□□□□ -0.03
FGFR1-223ENST00000496296 LINC00242Q5T6M2 205 aa14.84□□□□□ -0.03
FGFR1-223ENST00000496296 TMEM243Q9BU79 118 aa14.84□□□□□ -0.03
FGFR1-223ENST00000496296 CDC42SE2Q9NRR3 84 aa14.84□□□□□ -0.03
FGFR1-223ENST00000496296 CDKN2A-AS1Q9UH64 79 aa14.84□□□□□ -0.03
FGFR1-223ENST00000496296 A0A0B4J2C4 111 aa14.83□□□□□ -0.04
FGFR1-223ENST00000496296 IGLV5-39A0A0G2JS06 123 aa14.83□□□□□ -0.04
FGFR1-223ENST00000496296 C21orf62-AS1Q17RA5 79 aa14.83□□□□□ -0.04
FGFR1-223ENST00000496296 KPRPQ5T749 579 aaPredicted RBP14.83□□□□□ -0.04
FGFR1-223ENST00000496296 APOMO95445 188 aa14.82□□□□□ -0.04
FGFR1-223ENST00000496296 SPINK8P0C7L1 97 aa14.82□□□□□ -0.04
FGFR1-223ENST00000496296 RETNQ9HD89 108 aa14.82□□□□□ -0.04
FGFR1-223ENST00000496296 PRO0255Q9UI72 69 aa14.82□□□□□ -0.04
FGFR1-223ENST00000496296 J3QR89 54 aa14.82□□□□□ -0.04
FGFR1-223ENST00000496296 PRO1854Q9UHT4 67 aa14.82□□□□□ -0.04
FGFR1-223ENST00000496296 A4D1N5 150 aa14.81□□□□□ -0.04
FGFR1-223ENST00000496296 ATP5G1P05496 136 aa14.81□□□□□ -0.04
FGFR1-223ENST00000496296 MUSTN1Q8IVN3 82 aa14.81□□□□□ -0.04
FGFR1-223ENST00000496296 CELA1Q9UNI1 258 aa14.81□□□□□ -0.04
FGFR1-223ENST00000496296 NOTCH1P46531 2555 aa14.81□□□□□ -0.04
FGFR1-223ENST00000496296 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.8□□□□□ -0.04
FGFR1-223ENST00000496296 NDUFA1O15239 70 aa14.8□□□□□ -0.04
FGFR1-223ENST00000496296 PRB2P02812 416 aaPredicted RBP14.8□□□□□ -0.04
FGFR1-223ENST00000496296 COX6A2Q02221 97 aa14.8□□□□□ -0.04
FGFR1-223ENST00000496296 TMEM101Q96IK0 257 aa14.8□□□□□ -0.04
FGFR1-223ENST00000496296 MEGF8Q7Z7M0 2845 aa14.8□□□□□ -0.04
FGFR1-223ENST00000496296 LOC100131303A0A0U1RQF7 123 aa14.8□□□□□ -0.04
FGFR1-223ENST00000496296 TRBV20-1A0A075B6N2 111 aa14.78□□□□□ -0.04
FGFR1-223ENST00000496296 EIF4EBP3O60516 100 aaPredicted RBP14.78□□□□□ -0.04
FGFR1-223ENST00000496296 DEFB121Q5J5C9 76 aa14.78□□□□□ -0.04
FGFR1-223ENST00000496296 K7EIL1 84 aa14.78□□□□□ -0.04
FGFR1-223ENST00000496296 ATP6V0E2Q8NHE4 81 aa14.78□□□□□ -0.04
FGFR1-223ENST00000496296 UBE2L6O14933 153 aa14.77□□□□□ -0.05
FGFR1-223ENST00000496296 MIAQ16674 131 aa14.77□□□□□ -0.05
FGFR1-223ENST00000496296 C11orf68Q9H3H3 251 aaKnown RBP14.77□□□□□ -0.05
FGFR1-223ENST00000496296 PAX4O43316 350 aa14.76□□□□□ -0.05
FGFR1-223ENST00000496296 IGHV3-33P01772 117 aa14.76□□□□□ -0.05
FGFR1-223ENST00000496296 GYPEP15421 78 aa14.76□□□□□ -0.05
FGFR1-223ENST00000496296 ETDBQ3ZM63 59 aa14.76□□□□□ -0.05
FGFR1-223ENST00000496296 LOC107984156A0A0G2JMH3 177 aa14.76□□□□□ -0.05
FGFR1-223ENST00000496296 ARL17AQ8IVW1 177 aa14.76□□□□□ -0.05
FGFR1-223ENST00000496296 SMIM1B2RUZ4 78 aa14.75□□□□□ -0.05
FGFR1-223ENST00000496296 F5H768 121 aa14.75□□□□□ -0.05
FGFR1-223ENST00000496296 SPATA25Q9BR10 227 aa14.75□□□□□ -0.05
FGFR1-223ENST00000496296 TRBV6-8A0A0A6YYG3 113 aa14.74□□□□□ -0.05
FGFR1-223ENST00000496296 IFITM1P13164 125 aa14.74□□□□□ -0.05
FGFR1-223ENST00000496296 ADAMTSL4-AS1Q5T5F5 129 aa14.74□□□□□ -0.05
FGFR1-223ENST00000496296 PSMB2P49721 201 aa14.74□□□□□ -0.05
FGFR1-223ENST00000496296 SH2D6Q7Z4S9 175 aa14.74□□□□□ -0.05
FGFR1-223ENST00000496296 HTN3P15516 51 aa14.72□□□□□ -0.05
FGFR1-223ENST00000496296 SMCPP49901 116 aaPredicted RBP14.72□□□□□ -0.05
FGFR1-223ENST00000496296 TRAV13-1A0A0B4J241 112 aa14.72□□□□□ -0.05
FGFR1-223ENST00000496296 ERG28Q9UKR5 140 aa14.71□□□□□ -0.05
FGFR1-223ENST00000496296 NBEAL2Q6ZNJ1 2754 aa14.71□□□□□ -0.06
FGFR1-223ENST00000496296 DNAH3Q8TD57 4116 aa14.7□□□□□ -0.06
FGFR1-223ENST00000496296 TCL1BO95988 128 aa14.7□□□□□ -0.06
FGFR1-223ENST00000496296 MRAPQ8TCY5 172 aa14.69□□□□□ -0.06
FGFR1-223ENST00000496296 TM2D3Q9BRN9 247 aa14.69□□□□□ -0.06
FGFR1-223ENST00000496296 PPDPFQ9H3Y8 114 aa14.69□□□□□ -0.06
FGFR1-223ENST00000496296 TRAV26-1A0A087WT03 109 aa14.69□□□□□ -0.06
FGFR1-223ENST00000496296 A0A0J9YWU9 116 aa14.69□□□□□ -0.06
FGFR1-223ENST00000496296 MTURNQ8N3F0 131 aa14.69□□□□□ -0.06
FGFR1-223ENST00000496296 ZNF625Q96I27 306 aaPredicted RBP14.69□□□□□ -0.06
FGFR1-223ENST00000496296 CIRBPQ14011 172 aaKnown RBP14.67□□□□□ -0.06
FGFR1-223ENST00000496296 GAGE12HA6NDE8 117 aa14.67□□□□□ -0.06
FGFR1-223ENST00000496296 M0QXV9 152 aa14.67□□□□□ -0.06
FGFR1-223ENST00000496296 GAGE6Q13070 117 aa14.67□□□□□ -0.06
FGFR1-223ENST00000496296 SFTA2Q6UW10 78 aa14.67□□□□□ -0.06
FGFR1-223ENST00000496296 Q9H8V8 135 aa14.67□□□□□ -0.06
FGFR1-223ENST00000496296 PRSS2P07478 247 aa14.66□□□□□ -0.06
FGFR1-223ENST00000496296 HERV-K104P63124 156 aa14.66□□□□□ -0.06
FGFR1-223ENST00000496296 FOXI1Q12951 378 aa14.66□□□□□ -0.06
FGFR1-223ENST00000496296 MRPL23Q16540 153 aaKnown RBP14.65□□□□□ -0.06
FGFR1-223ENST00000496296 TRBV30A0A0K0K1B3 111 aa14.65□□□□□ -0.06
FGFR1-223ENST00000496296 SCGB1C2P0DMR2 95 aa14.65□□□□□ -0.06
FGFR1-223ENST00000496296 C11orf45Q8TAV5 145 aa14.65□□□□□ -0.06
FGFR1-223ENST00000496296 COPS9Q8WXC6 57 aa14.64□□□□□ -0.07
FGFR1-223ENST00000496296 CHCHD5Q9BSY4 110 aa14.64□□□□□ -0.07
FGFR1-223ENST00000496296 ICOSQ9Y6W8 199 aa14.64□□□□□ -0.07
FGFR1-223ENST00000496296 IGLV4-60A0A075B6I1 120 aa14.63□□□□□ -0.07
FGFR1-223ENST00000496296 TEN1Q86WV5 123 aa14.63□□□□□ -0.07
FGFR1-223ENST00000496296 SIGMAR1Q99720 223 aa14.63□□□□□ -0.07
FGFR1-223ENST00000496296 A0A096LPF7 62 aa14.63□□□□□ -0.07
FGFR1-223ENST00000496296 A0A1B0GUV1 79 aa14.63□□□□□ -0.07
FGFR1-223ENST00000496296 SCGB1A1P11684 91 aa14.63□□□□□ -0.07
FGFR1-223ENST00000496296 Q6ZTC4 211 aa14.62□□□□□ -0.07
FGFR1-223ENST00000496296 IGHV3OR16-9A0A0B4J2B5 98 aa14.61□□□□□ -0.07
FGFR1-223ENST00000496296 LINC00308Q8TCZ7 52 aa14.61□□□□□ -0.07
FGFR1-223ENST00000496296 PPDPFLQ8WWR9 84 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms