RNA–Protein interactions for RNA: ENST00000495799.5

PPP1R3F-205, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene PPP1R3F, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-205ENST00000495799 COL7A1Q02388 2944 aa16.6■□□□□ 0.25
PPP1R3F-205ENST00000495799 J3QQQ9 107 aa16.6■□□□□ 0.25
PPP1R3F-205ENST00000495799 SPINK8P0C7L1 97 aa16.6■□□□□ 0.25
PPP1R3F-205ENST00000495799 PRR34Q9NV39 138 aa16.6■□□□□ 0.25
PPP1R3F-205ENST00000495799 SIVA1O15304 175 aa16.59■□□□□ 0.25
PPP1R3F-205ENST00000495799 UPK3BQ9BT76 320 aa16.59■□□□□ 0.25
PPP1R3F-205ENST00000495799 DNAH10OSP0CZ25 163 aa16.58■□□□□ 0.24
PPP1R3F-205ENST00000495799 IGHV3-64A0A075B6Q5 118 aa16.57■□□□□ 0.24
PPP1R3F-205ENST00000495799 MYMXA0A1B0GTQ4 84 aa16.57■□□□□ 0.24
PPP1R3F-205ENST00000495799 APLNQ9ULZ1 77 aa16.57■□□□□ 0.24
PPP1R3F-205ENST00000495799 TRAV8-4A0A0B4J246 113 aa16.56■□□□□ 0.24
PPP1R3F-205ENST00000495799 IGHV3OR16-9A0A0B4J2B5 98 aa16.56■□□□□ 0.24
PPP1R3F-205ENST00000495799 MEGF8Q7Z7M0 2845 aa16.56■□□□□ 0.24
PPP1R3F-205ENST00000495799 ZNF815PA8K554 130 aa16.55■□□□□ 0.24
PPP1R3F-205ENST00000495799 XCL1P47992 114 aa16.55■□□□□ 0.24
PPP1R3F-205ENST00000495799 CD164L2Q6UWJ8 174 aa16.55■□□□□ 0.24
PPP1R3F-205ENST00000495799 LINC01561Q8N1V8 128 aa16.55■□□□□ 0.24
PPP1R3F-205ENST00000495799 TTTY13Q9BZ97 58 aa16.55■□□□□ 0.24
PPP1R3F-205ENST00000495799 TRAV8-3A0A0A6YYJ7 113 aa16.55■□□□□ 0.24
PPP1R3F-205ENST00000495799 LINC00587B1AMM8 73 aa16.55■□□□□ 0.24
PPP1R3F-205ENST00000495799 SMIM1B2RUZ4 78 aa16.55■□□□□ 0.24
PPP1R3F-205ENST00000495799 CHCHD10Q8WYQ3 142 aaPredicted RBP16.55■□□□□ 0.24
PPP1R3F-205ENST00000495799 PRKDCP78527 4128 aaKnown RBP16.54■□□□□ 0.24
PPP1R3F-205ENST00000495799 A0A087WZ39 114 aa16.54■□□□□ 0.24
PPP1R3F-205ENST00000495799 MIAQ16674 131 aa16.54■□□□□ 0.24
PPP1R3F-205ENST00000495799 MAPKAPK5-AS1Q8N8E1 139 aa16.54■□□□□ 0.24
PPP1R3F-205ENST00000495799 UBE2WQ96B02 151 aa16.54■□□□□ 0.24
PPP1R3F-205ENST00000495799 IGLV5-39A0A0G2JS06 123 aa16.53■□□□□ 0.24
PPP1R3F-205ENST00000495799 TP73-AS1Q9UF72 201 aa16.53■□□□□ 0.24
PPP1R3F-205ENST00000495799 TSPEAR-AS2P59090 65 aa16.52■□□□□ 0.24
PPP1R3F-205ENST00000495799 ENHOQ6UWT2 76 aa16.52■□□□□ 0.24
PPP1R3F-205ENST00000495799 HIGD1BQ9P298 99 aa16.52■□□□□ 0.24
PPP1R3F-205ENST00000495799 CTAG1AP78358 180 aa16.51■□□□□ 0.23
PPP1R3F-205ENST00000495799 C2orf91Q6ZV80 131 aa16.51■□□□□ 0.23
PPP1R3F-205ENST00000495799 UBE2DNLQ8IWF7 75 aa16.51■□□□□ 0.23
PPP1R3F-205ENST00000495799 IGLV10-54A0A075B6I4 117 aa16.5■□□□□ 0.23
PPP1R3F-205ENST00000495799 COX7A2LO14548 114 aa16.5■□□□□ 0.23
PPP1R3F-205ENST00000495799 ZFAND6Q6FIF0 208 aa16.5■□□□□ 0.23
PPP1R3F-205ENST00000495799 SCGB1D4Q6XE38 83 aa16.5■□□□□ 0.23
PPP1R3F-205ENST00000495799 C5orf38Q86SI9 138 aa16.5■□□□□ 0.23
PPP1R3F-205ENST00000495799 C10orf126Q8N4M7 172 aa16.5■□□□□ 0.23
PPP1R3F-205ENST00000495799 STAB2Q8WWQ8 2551 aa16.48■□□□□ 0.23
PPP1R3F-205ENST00000495799 K7EP13 123 aa16.47■□□□□ 0.23
PPP1R3F-205ENST00000495799 NDUFA12Q9UI09 145 aa16.47■□□□□ 0.23
PPP1R3F-205ENST00000495799 GAGE12HA6NDE8 117 aa16.45■□□□□ 0.22
PPP1R3F-205ENST00000495799 MALP21145 153 aa16.45■□□□□ 0.22
PPP1R3F-205ENST00000495799 FOXI1Q12951 378 aa16.45■□□□□ 0.22
PPP1R3F-205ENST00000495799 Q9H8V8 135 aa16.45■□□□□ 0.22
PPP1R3F-205ENST00000495799 COX7B2Q8TF08 81 aa16.45■□□□□ 0.22
PPP1R3F-205ENST00000495799 NDUFA1O15239 70 aa16.44■□□□□ 0.22
PPP1R3F-205ENST00000495799 APOMO95445 188 aa16.44■□□□□ 0.22
PPP1R3F-205ENST00000495799 HSD52Q0P140 79 aa16.44■□□□□ 0.22
PPP1R3F-205ENST00000495799 C1orf43Q9BWL3 253 aa16.44■□□□□ 0.22
PPP1R3F-205ENST00000495799 IBA57-AS1B1ANH7 110 aa16.43■□□□□ 0.22
PPP1R3F-205ENST00000495799 M0R143 59 aa16.42■□□□□ 0.22
PPP1R3F-205ENST00000495799 SFTA2Q6UW10 78 aa16.42■□□□□ 0.22
PPP1R3F-205ENST00000495799 DYNC2H1Q8NCM8 4307 aaKnown RBP16.41■□□□□ 0.22
PPP1R3F-205ENST00000495799 MUC7Q8TAX7 377 aa16.41■□□□□ 0.22
PPP1R3F-205ENST00000495799 TOMM7Q9P0U1 55 aa16.41■□□□□ 0.22
PPP1R3F-205ENST00000495799 PRSS2P07478 247 aa16.4■□□□□ 0.22
PPP1R3F-205ENST00000495799 HERV-K104P63124 156 aa16.4■□□□□ 0.22
PPP1R3F-205ENST00000495799 TAL2Q16559 108 aa16.4■□□□□ 0.22
PPP1R3F-205ENST00000495799 RMI2Q96E14 147 aa16.4■□□□□ 0.22
PPP1R3F-205ENST00000495799 Q8IZM0 81 aa16.4■□□□□ 0.22
PPP1R3F-205ENST00000495799 WWC2-AS2Q96NR7 200 aa16.4■□□□□ 0.22
PPP1R3F-205ENST00000495799 A0A0J9YXY3 114 aa16.38■□□□□ 0.21
PPP1R3F-205ENST00000495799 IGKV2D-24A0A075B6R9 120 aa16.37■□□□□ 0.21
PPP1R3F-205ENST00000495799 TMEM238C9JI98 176 aa16.37■□□□□ 0.21
PPP1R3F-205ENST00000495799 ORAOV1Q8WV07 137 aa16.37■□□□□ 0.21
PPP1R3F-205ENST00000495799 SPANXB1Q9NS25 103 aaPredicted RBP16.37■□□□□ 0.21
PPP1R3F-205ENST00000495799 HINT1P49773 126 aaPredicted RBP16.36■□□□□ 0.21
PPP1R3F-205ENST00000495799 C6orf226Q5I0X4 101 aa16.36■□□□□ 0.21
PPP1R3F-205ENST00000495799 ZNF625Q96I27 306 aaPredicted RBP16.36■□□□□ 0.21
PPP1R3F-205ENST00000495799 HIST1H4GQ99525 98 aa16.36■□□□□ 0.21
PPP1R3F-205ENST00000495799 CXCL5P42830 114 aa16.35■□□□□ 0.21
PPP1R3F-205ENST00000495799 CFAP161Q6P656 301 aa16.35■□□□□ 0.21
PPP1R3F-205ENST00000495799 Q9HAA7 133 aa16.35■□□□□ 0.21
PPP1R3F-205ENST00000495799 TIMM17BO60830 172 aa16.35■□□□□ 0.21
PPP1R3F-205ENST00000495799 SRSF9Q13242 221 aaKnown RBP eCLIP16.35■□□□□ 0.21
PPP1R3F-205ENST00000495799 CIRBPQ14011 172 aaKnown RBP16.35■□□□□ 0.21
PPP1R3F-205ENST00000495799 SNHG12Q9BXW3 62 aa16.35■□□□□ 0.21
PPP1R3F-205ENST00000495799 KRTAP26-1Q6PEX3 210 aa16.34■□□□□ 0.21
PPP1R3F-205ENST00000495799 BATFQ16520 125 aa16.33■□□□□ 0.2
PPP1R3F-205ENST00000495799 BVES-AS1Q5T3Y7 98 aa16.33■□□□□ 0.2
PPP1R3F-205ENST00000495799 TTC32Q5I0X7 151 aa16.32■□□□□ 0.2
PPP1R3F-205ENST00000495799 COX11Q9Y6N1 276 aa16.32■□□□□ 0.2
PPP1R3F-205ENST00000495799 CKS1BP61024 79 aa16.31■□□□□ 0.2
PPP1R3F-205ENST00000495799 CEND1Q8N111 149 aa16.31■□□□□ 0.2
PPP1R3F-205ENST00000495799 EREGO14944 169 aa16.3■□□□□ 0.2
PPP1R3F-205ENST00000495799 GCSHP23434 173 aa16.3■□□□□ 0.2
PPP1R3F-205ENST00000495799 SPAG11BQ08648 103 aa16.3■□□□□ 0.2
PPP1R3F-205ENST00000495799 LBHQ53QV2 105 aaPredicted RBP16.3■□□□□ 0.2
PPP1R3F-205ENST00000495799 DNAH7Q8WXX0 4024 aa16.3■□□□□ 0.2
PPP1R3F-205ENST00000495799 MEIG1Q5JSS6 88 aa16.29■□□□□ 0.2
PPP1R3F-205ENST00000495799 Q6ZVH6 145 aa16.29■□□□□ 0.2
PPP1R3F-205ENST00000495799 FBN3Q75N90 2809 aa16.29■□□□□ 0.2
PPP1R3F-205ENST00000495799 KIAA0087Q14695 138 aa16.28■□□□□ 0.2
PPP1R3F-205ENST00000495799 TM2D2Q9BX73 214 aa16.28■□□□□ 0.2
PPP1R3F-205ENST00000495799 SPANXDQ9BXN6 97 aa16.28■□□□□ 0.2
PPP1R3F-205ENST00000495799 SPANXCQ9NY87 97 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms