RNA–Protein interactions for RNA: ENST00000494862.1

HDLBP-245, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 356 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-245ENST00000494862 PKD1L1Q8TDX9 2849 aa7.93□□□□□ -1.14
HDLBP-245ENST00000494862 PRKDCP78527 4128 aaKnown RBP7.93□□□□□ -1.14
HDLBP-245ENST00000494862 IGHV1-58A0A0C4DH39 117 aa7.93□□□□□ -1.14
HDLBP-245ENST00000494862 LGALS3P17931 250 aaKnown RBP7.93□□□□□ -1.14
HDLBP-245ENST00000494862 TSPEAR-AS2P59090 65 aa7.93□□□□□ -1.14
HDLBP-245ENST00000494862 RBX1P62877 108 aa7.93□□□□□ -1.14
HDLBP-245ENST00000494862 COX6A2Q02221 97 aa7.93□□□□□ -1.14
HDLBP-245ENST00000494862 MPV17L2Q567V2 206 aa7.93□□□□□ -1.14
HDLBP-245ENST00000494862 HUWE1Q7Z6Z7 4374 aaKnown RBP7.93□□□□□ -1.14
HDLBP-245ENST00000494862 COL5A1-AS1Q5SY13 56 aa7.92□□□□□ -1.14
HDLBP-245ENST00000494862 CDKN2A-AS1Q9UH64 79 aa7.92□□□□□ -1.14
HDLBP-245ENST00000494862 IGHV3-64A0A075B6Q5 118 aa7.91□□□□□ -1.14
HDLBP-245ENST00000494862 DEFB131BA0A096LNP1 70 aa7.91□□□□□ -1.14
HDLBP-245ENST00000494862 SPINK8P0C7L1 97 aa7.91□□□□□ -1.14
HDLBP-245ENST00000494862 IGHV3-30-3P0DP02 117 aa7.91□□□□□ -1.14
HDLBP-245ENST00000494862 TAL2Q16559 108 aa7.91□□□□□ -1.14
HDLBP-245ENST00000494862 LYPD5Q6UWN5 251 aa7.91□□□□□ -1.14
HDLBP-245ENST00000494862 TRAV8-3A0A0A6YYJ7 113 aa7.9□□□□□ -1.14
HDLBP-245ENST00000494862 TRAV10A0A0B4J240 114 aa7.9□□□□□ -1.14
HDLBP-245ENST00000494862 IGLV5-39A0A0G2JS06 123 aa7.89□□□□□ -1.15
HDLBP-245ENST00000494862 LINC00959A0A1B0GUT2 108 aa7.89□□□□□ -1.15
HDLBP-245ENST00000494862 CCL25O15444 150 aa7.89□□□□□ -1.15
HDLBP-245ENST00000494862 SCGB1D4Q6XE38 83 aa7.89□□□□□ -1.15
HDLBP-245ENST00000494862 ORAOV1Q8WV07 137 aa7.89□□□□□ -1.15
HDLBP-245ENST00000494862 B9D2Q9BPU9 175 aa7.89□□□□□ -1.15
HDLBP-245ENST00000494862 NOTCH1P46531 2555 aa7.89□□□□□ -1.15
HDLBP-245ENST00000494862 IGKV3OR2-268A0A0C4DH90 116 aa7.88□□□□□ -1.15
HDLBP-245ENST00000494862 SS18Q15532 418 aa7.88□□□□□ -1.15
HDLBP-245ENST00000494862 SMIM1B2RUZ4 78 aa7.87□□□□□ -1.15
HDLBP-245ENST00000494862 ZFAND6Q6FIF0 208 aa7.87□□□□□ -1.15
HDLBP-245ENST00000494862 CEND1Q8N111 149 aa7.87□□□□□ -1.15
HDLBP-245ENST00000494862 HIST1H4GQ99525 98 aa7.87□□□□□ -1.15
HDLBP-245ENST00000494862 TM2D2Q9BX73 214 aa7.87□□□□□ -1.15
HDLBP-245ENST00000494862 NDUFA12Q9UI09 145 aa7.87□□□□□ -1.15
HDLBP-245ENST00000494862 DNAH9Q9NYC9 4486 aa7.87□□□□□ -1.15
HDLBP-245ENST00000494862 IGHV3OR16-9A0A0B4J2B5 98 aa7.86□□□□□ -1.15
HDLBP-245ENST00000494862 GCSHP23434 173 aa7.86□□□□□ -1.15
HDLBP-245ENST00000494862 LINC01561Q8N1V8 128 aa7.86□□□□□ -1.15
HDLBP-245ENST00000494862 SPANXB1Q9NS25 103 aaPredicted RBP7.86□□□□□ -1.15
HDLBP-245ENST00000494862 A0A087WZ39 114 aa7.85□□□□□ -1.15
HDLBP-245ENST00000494862 A0A1B0GV90 55 aa7.85□□□□□ -1.15
HDLBP-245ENST00000494862 A6NDN8 102 aa7.85□□□□□ -1.15
HDLBP-245ENST00000494862 ANGP03950 147 aaKnown RBP7.85□□□□□ -1.15
HDLBP-245ENST00000494862 LINC00269Q8N2A0 174 aa7.85□□□□□ -1.15
HDLBP-245ENST00000494862 C10orf126Q8N4M7 172 aa7.85□□□□□ -1.15
HDLBP-245ENST00000494862 C15orf53Q8NAA6 179 aa7.85□□□□□ -1.15
HDLBP-245ENST00000494862 A0A0J9YXY3 114 aa7.84□□□□□ -1.15
HDLBP-245ENST00000494862 NDUFA1O15239 70 aa7.84□□□□□ -1.15
HDLBP-245ENST00000494862 EIF4EBP3O60516 100 aaPredicted RBP7.84□□□□□ -1.15
HDLBP-245ENST00000494862 FXYD2P54710 66 aa7.84□□□□□ -1.15
HDLBP-245ENST00000494862 SRSF9Q13242 221 aaKnown RBP eCLIP7.84□□□□□ -1.15
HDLBP-245ENST00000494862 ESRGQ1W209 222 aa7.84□□□□□ -1.15
HDLBP-245ENST00000494862 Q8N3U1 123 aa7.84□□□□□ -1.15
HDLBP-245ENST00000494862 NHLRC4P0CG21 123 aaPredicted RBP7.83□□□□□ -1.16
HDLBP-245ENST00000494862 PTTG1IPP53801 180 aa7.83□□□□□ -1.16
HDLBP-245ENST00000494862 REG3AQ06141 175 aa7.83□□□□□ -1.16
HDLBP-245ENST00000494862 CLPSL2Q6UWE3 100 aa7.83□□□□□ -1.16
HDLBP-245ENST00000494862 C5orf38Q86SI9 138 aa7.83□□□□□ -1.16
HDLBP-245ENST00000494862 TMEM238C9JI98 176 aa7.82□□□□□ -1.16
HDLBP-245ENST00000494862 TAX1BP3O14907 124 aa7.82□□□□□ -1.16
HDLBP-245ENST00000494862 TIMM17BO60830 172 aa7.82□□□□□ -1.16
HDLBP-245ENST00000494862 XCL1P47992 114 aa7.82□□□□□ -1.16
HDLBP-245ENST00000494862 CD164L2Q6UWJ8 174 aa7.82□□□□□ -1.16
HDLBP-245ENST00000494862 COX7B2Q8TF08 81 aa7.82□□□□□ -1.16
HDLBP-245ENST00000494862 PRR34Q9NV39 138 aa7.82□□□□□ -1.16
HDLBP-245ENST00000494862 TENM3Q9P273 2699 aa7.82□□□□□ -1.16
HDLBP-245ENST00000494862 IGHV3-30P01768 117 aa7.81□□□□□ -1.16
HDLBP-245ENST00000494862 IGHV3-33P01772 117 aa7.81□□□□□ -1.16
HDLBP-245ENST00000494862 IGHV3-30-5P0DP03 117 aa7.81□□□□□ -1.16
HDLBP-245ENST00000494862 HERV-K104P63124 156 aa7.81□□□□□ -1.16
HDLBP-245ENST00000494862 WFDC10BQ8IUB3 73 aa7.81□□□□□ -1.16
HDLBP-245ENST00000494862 CHCHD10Q8WYQ3 142 aaPredicted RBP7.81□□□□□ -1.16
HDLBP-245ENST00000494862 Q9H8V8 135 aa7.81□□□□□ -1.16
HDLBP-245ENST00000494862 KLK12Q9UKR0 248 aa7.81□□□□□ -1.16
HDLBP-245ENST00000494862 K7EP13 123 aa7.8□□□□□ -1.16
HDLBP-245ENST00000494862 SMIM13P0DJ93 91 aa7.8□□□□□ -1.16
HDLBP-245ENST00000494862 ZNF625Q96I27 306 aaPredicted RBP7.8□□□□□ -1.16
HDLBP-245ENST00000494862 LITAFQ99732 161 aa7.8□□□□□ -1.16
HDLBP-245ENST00000494862 SPANXDQ9BXN6 97 aa7.8□□□□□ -1.16
HDLBP-245ENST00000494862 SPANXCQ9NY87 97 aa7.8□□□□□ -1.16
HDLBP-245ENST00000494862 COX11Q9Y6N1 276 aa7.8□□□□□ -1.16
HDLBP-245ENST00000494862 KMT2CQ8NEZ4 4911 aaKnown RBP7.79□□□□□ -1.16
HDLBP-245ENST00000494862 TRAV8-4A0A0B4J246 113 aa7.79□□□□□ -1.16
HDLBP-245ENST00000494862 COX7A2LO14548 114 aa7.79□□□□□ -1.16
HDLBP-245ENST00000494862 LINC01556Q5JQF7 62 aa7.79□□□□□ -1.16
HDLBP-245ENST00000494862 ENHOQ6UWT2 76 aa7.79□□□□□ -1.16
HDLBP-245ENST00000494862 Q6ZVH6 145 aa7.79□□□□□ -1.16
HDLBP-245ENST00000494862 NHP2Q9NX24 153 aaKnown RBP7.79□□□□□ -1.16
HDLBP-245ENST00000494862 IGLV10-54A0A075B6I4 117 aa7.78□□□□□ -1.16
HDLBP-245ENST00000494862 A0A1B0GWB2 263 aa7.78□□□□□ -1.16
HDLBP-245ENST00000494862 IGLL5B9A064 214 aa7.78□□□□□ -1.16
HDLBP-245ENST00000494862 CRPP02741 224 aa7.78□□□□□ -1.16
HDLBP-245ENST00000494862 FOXI1Q12951 378 aa7.78□□□□□ -1.16
HDLBP-245ENST00000494862 CIRBPQ14011 172 aaKnown RBP7.78□□□□□ -1.16
HDLBP-245ENST00000494862 SFTA2Q6UW10 78 aa7.78□□□□□ -1.16
HDLBP-245ENST00000494862 TOMM7Q9P0U1 55 aa7.78□□□□□ -1.16
HDLBP-245ENST00000494862 RYR3Q15413 4870 aa7.77□□□□□ -1.17
HDLBP-245ENST00000494862 GAGE12HA6NDE8 117 aa7.77□□□□□ -1.17
HDLBP-245ENST00000494862 C9orf118A6NHY6 69 aa7.77□□□□□ -1.17
HDLBP-245ENST00000494862 MIAQ16674 131 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 219.2 ms