RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 ZFP36P26651 326 aaKnown RBP3.32□□□□□ -1.88
PRKD3-210ENST00000494667 Q8IZM0 81 aa3.32□□□□□ -1.88
PRKD3-210ENST00000494667 Q9UF83 564 aa3.32□□□□□ -1.88
PRKD3-210ENST00000494667 BPY2O14599 106 aa3.31□□□□□ -1.88
PRKD3-210ENST00000494667 Q6ZRP5 223 aa3.31□□□□□ -1.88
PRKD3-210ENST00000494667 TNRC18O15417 2968 aaPredicted RBP3.31□□□□□ -1.88
PRKD3-210ENST00000494667 A6NDX4 124 aa3.31□□□□□ -1.88
PRKD3-210ENST00000494667 SPINK13Q1W4C9 94 aa3.31□□□□□ -1.88
PRKD3-210ENST00000494667 FRYQ5TBA9 3013 aa3.31□□□□□ -1.88
PRKD3-210ENST00000494667 PAX4O43316 350 aa3.31□□□□□ -1.88
PRKD3-210ENST00000494667 Q6ZTI0 123 aa3.31□□□□□ -1.88
PRKD3-210ENST00000494667 IGKV4-1P06312 121 aa3.3□□□□□ -1.88
PRKD3-210ENST00000494667 LINC00158P58513 81 aa3.3□□□□□ -1.88
PRKD3-210ENST00000494667 C19orf84I3L1E1 186 aa3.3□□□□□ -1.88
PRKD3-210ENST00000494667 C11orf68Q9H3H3 251 aaKnown RBP3.3□□□□□ -1.88
PRKD3-210ENST00000494667 TECTAO75443 2155 aa3.29□□□□□ -1.88
PRKD3-210ENST00000494667 KTN1-AS1Q86SY8 53 aa3.29□□□□□ -1.88
PRKD3-210ENST00000494667 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.29□□□□□ -1.88
PRKD3-210ENST00000494667 PHF5AQ7RTV0 110 aaKnown RBP3.29□□□□□ -1.88
PRKD3-210ENST00000494667 SPATA3Q8NHX4 192 aa3.29□□□□□ -1.88
PRKD3-210ENST00000494667 LINC00588Q9Y4M8 146 aa3.29□□□□□ -1.88
PRKD3-210ENST00000494667 IGHV4-61A0A0C4DH41 118 aa3.29□□□□□ -1.88
PRKD3-210ENST00000494667 CCL24O00175 119 aa3.29□□□□□ -1.88
PRKD3-210ENST00000494667 IGLV6-57P01721 117 aa3.29□□□□□ -1.88
PRKD3-210ENST00000494667 IGHV4-30-4P0DP06 118 aa3.29□□□□□ -1.88
PRKD3-210ENST00000494667 M0R2N4 97 aa3.28□□□□□ -1.88
PRKD3-210ENST00000494667 CD164L2Q6UWJ8 174 aa3.28□□□□□ -1.88
PRKD3-210ENST00000494667 BBC3Q96PG8 261 aaPredicted RBP3.28□□□□□ -1.88
PRKD3-210ENST00000494667 CFAP47Q6ZTR5 3102 aa3.28□□□□□ -1.88
PRKD3-210ENST00000494667 IGHV3-11P01762 117 aa3.28□□□□□ -1.88
PRKD3-210ENST00000494667 ELOF1P60002 83 aaKnown RBP3.28□□□□□ -1.88
PRKD3-210ENST00000494667 IGHV3-73A0A0B4J1V6 119 aa3.28□□□□□ -1.88
PRKD3-210ENST00000494667 NDUFS5O43920 106 aa3.28□□□□□ -1.88
PRKD3-210ENST00000494667 GNLYP22749 145 aa3.28□□□□□ -1.88
PRKD3-210ENST00000494667 UBE2BP63146 152 aa3.28□□□□□ -1.88
PRKD3-210ENST00000494667 DEFB109BQ30KR1 87 aa3.28□□□□□ -1.88
PRKD3-210ENST00000494667 VPS13AQ96RL7 3174 aa3.28□□□□□ -1.88
PRKD3-210ENST00000494667 COX7BP24311 80 aa3.28□□□□□ -1.89
PRKD3-210ENST00000494667 LPAL2Q16609 132 aa3.28□□□□□ -1.89
PRKD3-210ENST00000494667 ZNF843Q8N446 348 aa3.27□□□□□ -1.89
PRKD3-210ENST00000494667 MPLKIPQ8TAP9 179 aa3.27□□□□□ -1.89
PRKD3-210ENST00000494667 SPEGQ15772 3267 aa3.27□□□□□ -1.89
PRKD3-210ENST00000494667 INSP01308 110 aa3.27□□□□□ -1.89
PRKD3-210ENST00000494667 DAD1P61803 113 aa3.27□□□□□ -1.89
PRKD3-210ENST00000494667 HAMPP81172 84 aa3.27□□□□□ -1.89
PRKD3-210ENST00000494667 TRAV22A0A0B4J277 110 aa3.27□□□□□ -1.89
PRKD3-210ENST00000494667 ARRDC1-AS1Q9H2J1 176 aa3.27□□□□□ -1.89
PRKD3-210ENST00000494667 A0A1B0GUV1 79 aa3.26□□□□□ -1.89
PRKD3-210ENST00000494667 VPREB1P12018 145 aa3.26□□□□□ -1.89
PRKD3-210ENST00000494667 KIAA0087Q14695 138 aa3.26□□□□□ -1.89
PRKD3-210ENST00000494667 C1orf64Q8NEQ6 169 aa3.26□□□□□ -1.89
PRKD3-210ENST00000494667 FAM186AA6NE01 2351 aa3.26□□□□□ -1.89
PRKD3-210ENST00000494667 PSCAO43653 123 aa3.26□□□□□ -1.89
PRKD3-210ENST00000494667 FRYLO94915 3013 aa3.26□□□□□ -1.89
PRKD3-210ENST00000494667 FREM2Q5SZK8 3169 aa3.26□□□□□ -1.89
PRKD3-210ENST00000494667 TRBV6-8A0A0A6YYG3 113 aa3.25□□□□□ -1.89
PRKD3-210ENST00000494667 UBE2L6O14933 153 aa3.25□□□□□ -1.89
PRKD3-210ENST00000494667 SYCNQ0VAF6 134 aa3.25□□□□□ -1.89
PRKD3-210ENST00000494667 C6orf99Q4VX62 202 aa3.25□□□□□ -1.89
PRKD3-210ENST00000494667 Q9BRP9 147 aa3.25□□□□□ -1.89
PRKD3-210ENST00000494667 SPENQ96T58 3664 aaKnown RBP3.25□□□□□ -1.89
PRKD3-210ENST00000494667 LINC00959A0A1B0GUT2 108 aa3.25□□□□□ -1.89
PRKD3-210ENST00000494667 Q5VV11 94 aa3.25□□□□□ -1.89
PRKD3-210ENST00000494667 ATP11AUNQ6ZP68 121 aa3.25□□□□□ -1.89
PRKD3-210ENST00000494667 MRPL55Q7Z7F7 128 aaKnown RBP3.25□□□□□ -1.89
PRKD3-210ENST00000494667 TRIOO75962 3097 aa3.25□□□□□ -1.89
PRKD3-210ENST00000494667 GVQW2A0A096LPI5 108 aaPredicted RBP3.25□□□□□ -1.89
PRKD3-210ENST00000494667 SPANXA2-OT1Q8N9U9 137 aa3.25□□□□□ -1.89
PRKD3-210ENST00000494667 MYO15AQ9UKN7 3530 aa3.25□□□□□ -1.89
PRKD3-210ENST00000494667 A6NN06 94 aa3.25□□□□□ -1.89
PRKD3-210ENST00000494667 UBE2AP49459 152 aa3.25□□□□□ -1.89
PRKD3-210ENST00000494667 SDK1Q7Z5N4 2213 aa3.24□□□□□ -1.89
PRKD3-210ENST00000494667 NDUFB1O75438 58 aa3.24□□□□□ -1.89
PRKD3-210ENST00000494667 RBM12B-AS1Q9P1G2 102 aa3.24□□□□□ -1.89
PRKD3-210ENST00000494667 URB1O60287 2271 aaKnown RBP3.24□□□□□ -1.89
PRKD3-210ENST00000494667 IGKV3-7A0A075B6H7 116 aa3.24□□□□□ -1.89
PRKD3-210ENST00000494667 A0A0J9YWU9 116 aa3.24□□□□□ -1.89
PRKD3-210ENST00000494667 LOC101927531A0A1B0GV80 90 aa3.24□□□□□ -1.89
PRKD3-210ENST00000494667 M0R378 163 aa3.24□□□□□ -1.89
PRKD3-210ENST00000494667 LIMD2Q9BT23 127 aa3.24□□□□□ -1.89
PRKD3-210ENST00000494667 DOPEY2Q9Y3R5 2298 aa3.24□□□□□ -1.89
PRKD3-210ENST00000494667 PRUNE2Q8WUY3 3088 aa3.24□□□□□ -1.89
PRKD3-210ENST00000494667 Q75L30 129 aa3.24□□□□□ -1.89
PRKD3-210ENST00000494667 HIGD2AQ9BW72 106 aa3.24□□□□□ -1.89
PRKD3-210ENST00000494667 IGKV3-20P01619 116 aa3.23□□□□□ -1.89
PRKD3-210ENST00000494667 MAP6D1Q9H9H5 199 aa3.23□□□□□ -1.89
PRKD3-210ENST00000494667 ABCA4P78363 2273 aa3.23□□□□□ -1.89
PRKD3-210ENST00000494667 A0A087X002 238 aa3.23□□□□□ -1.89
PRKD3-210ENST00000494667 LINC00612Q8N6U2 182 aa3.23□□□□□ -1.89
PRKD3-210ENST00000494667 Q8NDZ9 215 aa3.23□□□□□ -1.89
PRKD3-210ENST00000494667 UBE2E2Q96LR5 201 aa3.23□□□□□ -1.89
PRKD3-210ENST00000494667 ZFHX3Q15911 3703 aa3.23□□□□□ -1.89
PRKD3-210ENST00000494667 KALRNO60229 2985 aa3.23□□□□□ -1.89
PRKD3-210ENST00000494667 IGLV4-60A0A075B6I1 120 aa3.23□□□□□ -1.89
PRKD3-210ENST00000494667 RETNQ9HD89 108 aa3.23□□□□□ -1.89
PRKD3-210ENST00000494667 ICE1Q9Y2F5 2266 aa3.23□□□□□ -1.89
PRKD3-210ENST00000494667 PRO3102Q9H379 93 aa3.23□□□□□ -1.89
PRKD3-210ENST00000494667 H3BPC8 53 aa3.22□□□□□ -1.89
PRKD3-210ENST00000494667 Q6ZQY7 126 aa3.22□□□□□ -1.89
PRKD3-210ENST00000494667 TOMM7Q9P0U1 55 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 3169.8 ms