RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 IMMP2LQ96T52 175 aa20.96■□□□□ 0.95
CBX4-203ENST00000494546 Q6ZRU5 148 aa20.95■□□□□ 0.94
CBX4-203ENST00000494546 C7orf33Q8WU49 177 aa20.95■□□□□ 0.94
CBX4-203ENST00000494546 LINC00474Q9P2X8 69 aa20.95■□□□□ 0.94
CBX4-203ENST00000494546 Q8N8P6 123 aa20.94■□□□□ 0.94
CBX4-203ENST00000494546 CTDSP1Q9GZU7 261 aa20.94■□□□□ 0.94
CBX4-203ENST00000494546 PYGO1Q9Y3Y4 419 aa20.93■□□□□ 0.94
CBX4-203ENST00000494546 OXTP01178 125 aa20.92■□□□□ 0.94
CBX4-203ENST00000494546 SPAG11BQ08648 103 aa20.92■□□□□ 0.94
CBX4-203ENST00000494546 C2orf48Q96LS8 159 aa20.91■□□□□ 0.94
CBX4-203ENST00000494546 IGLV4-3A0A075B6K6 122 aa20.9■□□□□ 0.94
CBX4-203ENST00000494546 IGHV3OR16-9A0A0B4J2B5 98 aa20.9■□□□□ 0.94
CBX4-203ENST00000494546 ORAOV1Q8WV07 137 aa20.89■□□□□ 0.93
CBX4-203ENST00000494546 LOC107984640A0A0U1RRK4 108 aa20.88■□□□□ 0.93
CBX4-203ENST00000494546 GAGE2BQ13066 116 aa20.88■□□□□ 0.93
CBX4-203ENST00000494546 COMMD7Q86VX2 200 aa20.88■□□□□ 0.93
CBX4-203ENST00000494546 OR10D4PQ8NGN7 298 aa20.88■□□□□ 0.93
CBX4-203ENST00000494546 SEC11CQ9BY50 192 aa20.88■□□□□ 0.93
CBX4-203ENST00000494546 CYSLTR1Q9Y271 337 aa20.88■□□□□ 0.93
CBX4-203ENST00000494546 C2orf66Q6UXQ4 117 aa20.87■□□□□ 0.93
CBX4-203ENST00000494546 TMEM141Q96I45 108 aa20.87■□□□□ 0.93
CBX4-203ENST00000494546 PTTG1IPP53801 180 aa20.86■□□□□ 0.93
CBX4-203ENST00000494546 ORMDL2Q53FV1 153 aa20.86■□□□□ 0.93
CBX4-203ENST00000494546 LRP1Q07954 4544 aaKnown RBP20.86■□□□□ 0.93
CBX4-203ENST00000494546 TGIF2-C20orf24A0A0A6YYL0 155 aa20.84■□□□□ 0.93
CBX4-203ENST00000494546 KIAA1644Q3SXP7 199 aa20.84■□□□□ 0.93
CBX4-203ENST00000494546 TEX43Q6ZNM6 134 aa20.84■□□□□ 0.93
CBX4-203ENST00000494546 NXT2Q9NPJ8 142 aaKnown RBP20.84■□□□□ 0.93
CBX4-203ENST00000494546 TRAV9-1A0A075B6T8 112 aa20.83■□□□□ 0.93
CBX4-203ENST00000494546 LINC00242Q5T6M2 205 aa20.82■□□□□ 0.92
CBX4-203ENST00000494546 PKHD1L1Q86WI1 4243 aa20.82■□□□□ 0.92
CBX4-203ENST00000494546 K7EMI3 77 aa20.81■□□□□ 0.92
CBX4-203ENST00000494546 S100PP25815 95 aa20.81■□□□□ 0.92
CBX4-203ENST00000494546 A0A0J9YXV3 536 aa20.8■□□□□ 0.92
CBX4-203ENST00000494546 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP20.8■□□□□ 0.92
CBX4-203ENST00000494546 RPL18AQ02543 176 aaKnown RBP20.8■□□□□ 0.92
CBX4-203ENST00000494546 ZC2HC1BQ5TFG8 222 aa20.8■□□□□ 0.92
CBX4-203ENST00000494546 Q6ZN92 141 aa20.8■□□□□ 0.92
CBX4-203ENST00000494546 C2orf88Q9BSF0 95 aa20.8■□□□□ 0.92
CBX4-203ENST00000494546 FAT3Q8TDW7 4589 aa20.77■□□□□ 0.92
CBX4-203ENST00000494546 A0A087WZ39 114 aa20.77■□□□□ 0.92
CBX4-203ENST00000494546 NDUFA1O15239 70 aa20.77■□□□□ 0.92
CBX4-203ENST00000494546 UBE2D1P51668 147 aa20.77■□□□□ 0.92
CBX4-203ENST00000494546 PRR3P79522 188 aaKnown RBP20.77■□□□□ 0.92
CBX4-203ENST00000494546 RNF151Q2KHN1 245 aa20.77■□□□□ 0.92
CBX4-203ENST00000494546 VCX2Q9H322 139 aa20.77■□□□□ 0.92
CBX4-203ENST00000494546 F8WDY8 70 aa20.76■□□□□ 0.91
CBX4-203ENST00000494546 MRPL35Q9NZE8 188 aaKnown RBP20.76■□□□□ 0.91
CBX4-203ENST00000494546 LINC00173Q6ZV60 143 aa20.75■□□□□ 0.91
CBX4-203ENST00000494546 IGIPA6NJ69 53 aa20.74■□□□□ 0.91
CBX4-203ENST00000494546 AMELXQ99217 191 aa20.74■□□□□ 0.91
CBX4-203ENST00000494546 C10orf25Q5T742 122 aa20.73■□□□□ 0.91
CBX4-203ENST00000494546 GNB1LQ9BYB4 327 aa20.73■□□□□ 0.91
CBX4-203ENST00000494546 A0A1W2PNN7 141 aa20.72■□□□□ 0.91
CBX4-203ENST00000494546 UNQ6190/PRO20217Q6UXQ8 127 aa20.72■□□□□ 0.91
CBX4-203ENST00000494546 NPSP0C0P6 89 aa20.71■□□□□ 0.91
CBX4-203ENST00000494546 G0S2P27469 103 aa20.71■□□□□ 0.91
CBX4-203ENST00000494546 C10orf91Q5T1B1 145 aa20.7■□□□□ 0.9
CBX4-203ENST00000494546 RPS10P5Q9NQ39 176 aa20.7■□□□□ 0.9
CBX4-203ENST00000494546 KIAA0087Q14695 138 aa20.69■□□□□ 0.9
CBX4-203ENST00000494546 C9orf116Q5BN46 136 aaPredicted RBP20.69■□□□□ 0.9
CBX4-203ENST00000494546 CARHSP1Q9Y2V2 147 aaKnown RBP20.69■□□□□ 0.9
CBX4-203ENST00000494546 TOMM6Q96B49 74 aa20.68■□□□□ 0.9
CBX4-203ENST00000494546 C6orf48Q9UBA6 75 aa20.68■□□□□ 0.9
CBX4-203ENST00000494546 RHEBQ15382 184 aa20.67■□□□□ 0.9
CBX4-203ENST00000494546 COX19Q49B96 90 aa20.66■□□□□ 0.9
CBX4-203ENST00000494546 PAPPA-AS1Q5QFB9 102 aa20.66■□□□□ 0.9
CBX4-203ENST00000494546 TIMM17AQ99595 171 aa20.66■□□□□ 0.9
CBX4-203ENST00000494546 ALKBH7Q9BT30 221 aaPredicted RBP20.66■□□□□ 0.9
CBX4-203ENST00000494546 LINC01561Q8N1V8 128 aa20.65■□□□□ 0.9
CBX4-203ENST00000494546 Q6ZRP5 223 aa20.64■□□□□ 0.89
CBX4-203ENST00000494546 C2orf82Q6UX34 121 aa20.63■□□□□ 0.89
CBX4-203ENST00000494546 SCGB3A1Q96QR1 104 aa20.63■□□□□ 0.89
CBX4-203ENST00000494546 MRPL18Q9H0U6 180 aaKnown RBP20.63■□□□□ 0.89
CBX4-203ENST00000494546 MT-ND6P03923 174 aa20.62■□□□□ 0.89
CBX4-203ENST00000494546 FABP9Q0Z7S8 132 aa20.62■□□□□ 0.89
CBX4-203ENST00000494546 TLX1NBP0CAT3 122 aa20.61■□□□□ 0.89
CBX4-203ENST00000494546 FAM19A3Q7Z5A8 133 aa20.61■□□□□ 0.89
CBX4-203ENST00000494546 SERTAD4-AS1Q5TG53 156 aa20.6■□□□□ 0.89
CBX4-203ENST00000494546 ERASQ7Z444 233 aa20.6■□□□□ 0.89
CBX4-203ENST00000494546 MT1HL1P0DM35 61 aa20.59■□□□□ 0.89
CBX4-203ENST00000494546 GAGE2EQ4V326 116 aa20.59■□□□□ 0.89
CBX4-203ENST00000494546 TOMM7Q9P0U1 55 aa20.59■□□□□ 0.89
CBX4-203ENST00000494546 GAGE2DQ9UEU5 116 aa20.59■□□□□ 0.89
CBX4-203ENST00000494546 TRBV30A0A0K0K1B3 111 aa20.58■□□□□ 0.89
CBX4-203ENST00000494546 PRSS2P07478 247 aa20.58■□□□□ 0.89
CBX4-203ENST00000494546 HERVK_113P63121 156 aa20.58■□□□□ 0.89
CBX4-203ENST00000494546 SEC11AP67812 179 aa20.58■□□□□ 0.89
CBX4-203ENST00000494546 PHF5AQ7RTV0 110 aaKnown RBP20.58■□□□□ 0.89
CBX4-203ENST00000494546 PACRGQ96M98 296 aaPredicted RBP20.58■□□□□ 0.89
CBX4-203ENST00000494546 GEMIN7Q9H840 131 aaKnown RBP20.58■□□□□ 0.89
CBX4-203ENST00000494546 LINC01546A6NGU7 62 aa20.56■□□□□ 0.88
CBX4-203ENST00000494546 FA2HQ7L5A8 372 aa20.56■□□□□ 0.88
CBX4-203ENST00000494546 CDKN2A-AS1Q9UH64 79 aa20.56■□□□□ 0.88
CBX4-203ENST00000494546 FAM168BA1KXE4 195 aa20.55■□□□□ 0.88
CBX4-203ENST00000494546 SMCO4Q9NRQ5 59 aa20.55■□□□□ 0.88
CBX4-203ENST00000494546 SPINK6Q6UWN8 80 aa20.54■□□□□ 0.88
CBX4-203ENST00000494546 APOC3P02656 99 aa20.53■□□□□ 0.88
CBX4-203ENST00000494546 CKS1BP61024 79 aa20.53■□□□□ 0.88
CBX4-203ENST00000494546 C6orf226Q5I0X4 101 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms