RNA–Protein interactions for RNA: ENST00000494014.1

EPHA3-203, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-203ENST00000494014 LINC01561Q8N1V8 128 aa5.14□□□□□ -1.59
EPHA3-203ENST00000494014 Q8N9W7 124 aa5.14□□□□□ -1.59
EPHA3-203ENST00000494014 MINOS1-NBL1R4GNA1 71 aa5.14□□□□□ -1.59
EPHA3-203ENST00000494014 AKAP6Q13023 2319 aa5.14□□□□□ -1.59
EPHA3-203ENST00000494014 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.14□□□□□ -1.59
EPHA3-203ENST00000494014 IGHG2P01859 326 aa5.14□□□□□ -1.59
EPHA3-203ENST00000494014 MAPK1IP1LQ8NDC0 245 aa5.14□□□□□ -1.59
EPHA3-203ENST00000494014 UBE2D4Q9Y2X8 147 aa5.13□□□□□ -1.59
EPHA3-203ENST00000494014 ZANQ9Y493 2812 aa5.13□□□□□ -1.59
EPHA3-203ENST00000494014 RPL28P46779 137 aaKnown RBP5.13□□□□□ -1.59
EPHA3-203ENST00000494014 FHL2Q14192 279 aa5.13□□□□□ -1.59
EPHA3-203ENST00000494014 HIST2H2BDQ6DRA6 164 aa5.13□□□□□ -1.59
EPHA3-203ENST00000494014 OBSCN-AS1Q96MR7 158 aa5.13□□□□□ -1.59
EPHA3-203ENST00000494014 TMEM243Q9BU79 118 aa5.13□□□□□ -1.59
EPHA3-203ENST00000494014 IGLV5-45A0A087WSX0 123 aa5.12□□□□□ -1.59
EPHA3-203ENST00000494014 TRAV13-2A0A0B4J235 113 aa5.12□□□□□ -1.59
EPHA3-203ENST00000494014 IGHV3-16A0A0C4DH30 117 aa5.12□□□□□ -1.59
EPHA3-203ENST00000494014 RBMY1BA6NDE4 496 aaKnown RBP5.12□□□□□ -1.59
EPHA3-203ENST00000494014 RBMY1EA6NEQ0 496 aaKnown RBP5.12□□□□□ -1.59
EPHA3-203ENST00000494014 ATP6V0E1O15342 81 aa5.12□□□□□ -1.59
EPHA3-203ENST00000494014 RBMY1DP0C7P1 496 aaKnown RBP5.12□□□□□ -1.59
EPHA3-203ENST00000494014 RBMY1A1P0DJD3 496 aaKnown RBP5.12□□□□□ -1.59
EPHA3-203ENST00000494014 RBMY1CP0DJD4 496 aa5.12□□□□□ -1.59
EPHA3-203ENST00000494014 RBMY1FQ15415 496 aaKnown RBP5.12□□□□□ -1.59
EPHA3-203ENST00000494014 Q8N2B8 174 aa5.12□□□□□ -1.59
EPHA3-203ENST00000494014 FAM104AQ969W3 186 aa5.12□□□□□ -1.59
EPHA3-203ENST00000494014 C1orf43Q9BWL3 253 aa5.12□□□□□ -1.59
EPHA3-203ENST00000494014 LINC00846Q9NV44 126 aa5.12□□□□□ -1.59
EPHA3-203ENST00000494014 NDUFA4O00483 81 aa5.12□□□□□ -1.59
EPHA3-203ENST00000494014 BCE1O60756 84 aa5.12□□□□□ -1.59
EPHA3-203ENST00000494014 TMEM86BQ8N661 226 aa5.12□□□□□ -1.59
EPHA3-203ENST00000494014 A0A087WVE0 104 aa5.12□□□□□ -1.59
EPHA3-203ENST00000494014 FAM223BA6NKX1 122 aa5.12□□□□□ -1.59
EPHA3-203ENST00000494014 A8MZ25 164 aa5.12□□□□□ -1.59
EPHA3-203ENST00000494014 GHRHP01286 108 aa5.12□□□□□ -1.59
EPHA3-203ENST00000494014 FAM223AQ8IWN6 122 aa5.12□□□□□ -1.59
EPHA3-203ENST00000494014 FAM218AQ96MZ4 157 aa5.12□□□□□ -1.59
EPHA3-203ENST00000494014 LINC00336Q6ZUF6 198 aa5.11□□□□□ -1.59
EPHA3-203ENST00000494014 SMIM26A0A096LP01 95 aa5.11□□□□□ -1.59
EPHA3-203ENST00000494014 IGLV5-39A0A0G2JS06 123 aa5.11□□□□□ -1.59
EPHA3-203ENST00000494014 F6UB75 175 aa5.11□□□□□ -1.59
EPHA3-203ENST00000494014 H0YGX0 51 aa5.11□□□□□ -1.59
EPHA3-203ENST00000494014 Q9H8V8 135 aa5.11□□□□□ -1.59
EPHA3-203ENST00000494014 TRBV10-3A0A0K0K1G6 114 aa5.1□□□□□ -1.59
EPHA3-203ENST00000494014 RNASE1P07998 156 aaKnown RBP5.1□□□□□ -1.59
EPHA3-203ENST00000494014 C14orf132Q9NPU4 83 aa5.1□□□□□ -1.59
EPHA3-203ENST00000494014 RS1O15537 224 aa5.1□□□□□ -1.59
EPHA3-203ENST00000494014 CRPP02741 224 aa5.1□□□□□ -1.59
EPHA3-203ENST00000494014 DEFB1P60022 68 aa5.1□□□□□ -1.59
EPHA3-203ENST00000494014 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.1□□□□□ -1.59
EPHA3-203ENST00000494014 Q9HAA7 133 aa5.1□□□□□ -1.59
EPHA3-203ENST00000494014 CDKN2A-AS1Q9UH64 79 aa5.1□□□□□ -1.59
EPHA3-203ENST00000494014 CMYA5Q8N3K9 4069 aa5.1□□□□□ -1.59
EPHA3-203ENST00000494014 SOSTDC1Q6X4U4 206 aa5.1□□□□□ -1.59
EPHA3-203ENST00000494014 ROS1P08922 2347 aa5.1□□□□□ -1.59
EPHA3-203ENST00000494014 KNCNA6PVL3 124 aa5.09□□□□□ -1.59
EPHA3-203ENST00000494014 LYNX1G3V0Z9 82 aa5.09□□□□□ -1.59
EPHA3-203ENST00000494014 LYNX1P0DP58 116 aa5.09□□□□□ -1.59
EPHA3-203ENST00000494014 XCL1P47992 114 aa5.09□□□□□ -1.59
EPHA3-203ENST00000494014 XCL2Q9UBD3 114 aa5.09□□□□□ -1.59
EPHA3-203ENST00000494014 CUBNO60494 3623 aa5.09□□□□□ -1.59
EPHA3-203ENST00000494014 IGHV1OR15-1A0A075B7D0 117 aa5.09□□□□□ -1.6
EPHA3-203ENST00000494014 G3V318 75 aa5.09□□□□□ -1.6
EPHA3-203ENST00000494014 LY6HO94772 140 aa5.09□□□□□ -1.6
EPHA3-203ENST00000494014 TRBV12-3P01733 135 aa5.09□□□□□ -1.6
EPHA3-203ENST00000494014 RPL35AP18077 110 aaKnown RBP5.08□□□□□ -1.6
EPHA3-203ENST00000494014 RNASE13Q5GAN3 156 aaKnown RBP5.08□□□□□ -1.6
EPHA3-203ENST00000494014 C20orf197Q8N268 126 aa5.08□□□□□ -1.6
EPHA3-203ENST00000494014 CHCHD7Q9BUK0 85 aa5.08□□□□□ -1.6
EPHA3-203ENST00000494014 CCKP06307 115 aa5.08□□□□□ -1.6
EPHA3-203ENST00000494014 CSPG4Q6UVK1 2322 aa5.08□□□□□ -1.6
EPHA3-203ENST00000494014 UNQ9165/PRO28630Q6UXU0 137 aa5.08□□□□□ -1.6
EPHA3-203ENST00000494014 FAM19A3Q7Z5A8 133 aa5.08□□□□□ -1.6
EPHA3-203ENST00000494014 V9GYY9 64 aa5.08□□□□□ -1.6
EPHA3-203ENST00000494014 TRAV7A0A075B6U4 112 aa5.07□□□□□ -1.6
EPHA3-203ENST00000494014 LYPD5Q6UWN5 251 aa5.07□□□□□ -1.6
EPHA3-203ENST00000494014 H7BZZ5 65 aa5.07□□□□□ -1.6
EPHA3-203ENST00000494014 HOXD3P31249 432 aaPredicted RBP5.07□□□□□ -1.6
EPHA3-203ENST00000494014 ATP5EP56381 51 aaPredicted RBP5.07□□□□□ -1.6
EPHA3-203ENST00000494014 ZNF625Q96I27 306 aaPredicted RBP5.07□□□□□ -1.6
EPHA3-203ENST00000494014 COL6A5A8TX70 2615 aa5.06□□□□□ -1.6
EPHA3-203ENST00000494014 JMJD7-PLA2G4BH0Y9G9 81 aa5.06□□□□□ -1.6
EPHA3-203ENST00000494014 KLKP1Q107X0 134 aa5.06□□□□□ -1.6
EPHA3-203ENST00000494014 RHPN1-AS1Q9BWJ2 59 aa5.06□□□□□ -1.6
EPHA3-203ENST00000494014 PKIGQ9Y2B9 76 aa5.06□□□□□ -1.6
EPHA3-203ENST00000494014 A0A0U1RRA0 63 aa5.06□□□□□ -1.6
EPHA3-203ENST00000494014 SEC61GP60059 68 aa5.06□□□□□ -1.6
EPHA3-203ENST00000494014 DGAT2L7PQ6IED9 249 aa5.06□□□□□ -1.6
EPHA3-203ENST00000494014 C16orf95Q9H693 158 aa5.06□□□□□ -1.6
EPHA3-203ENST00000494014 TRAV23DV6A0A075B6W5 121 aa5.05□□□□□ -1.6
EPHA3-203ENST00000494014 A0A087WYN8 130 aa5.05□□□□□ -1.6
EPHA3-203ENST00000494014 AVPP01185 164 aa5.05□□□□□ -1.6
EPHA3-203ENST00000494014 C19orf54Q5BKX5 351 aa5.05□□□□□ -1.6
EPHA3-203ENST00000494014 PIK3CD-AS1Q5SR53 167 aa5.05□□□□□ -1.6
EPHA3-203ENST00000494014 ESM1Q9NQ30 184 aa5.05□□□□□ -1.6
EPHA3-203ENST00000494014 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.05□□□□□ -1.6
EPHA3-203ENST00000494014 IGKV2-29A2NJV5 120 aaPredicted RBP5.05□□□□□ -1.6
EPHA3-203ENST00000494014 SMIM1B2RUZ4 78 aa5.05□□□□□ -1.6
EPHA3-203ENST00000494014 H3BUA1 57 aa5.05□□□□□ -1.6
EPHA3-203ENST00000494014 NDUFC1O43677 76 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms