RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 GAGE7O76087 117 aa11.41□□□□□ -0.58
SEMA4D-220ENST00000492386 GAGE12FP0CL80 117 aa11.41□□□□□ -0.58
SEMA4D-220ENST00000492386 GAGE12GP0CL81 117 aa11.41□□□□□ -0.58
SEMA4D-220ENST00000492386 GAGE12IP0CL82 117 aa11.41□□□□□ -0.58
SEMA4D-220ENST00000492386 C2CD3Q4AC94 2353 aa11.41□□□□□ -0.58
SEMA4D-220ENST00000492386 TRAV8-4A0A0B4J246 113 aa11.41□□□□□ -0.58
SEMA4D-220ENST00000492386 UBE2L6O14933 153 aa11.4□□□□□ -0.58
SEMA4D-220ENST00000492386 RPL35AP18077 110 aaKnown RBP11.4□□□□□ -0.58
SEMA4D-220ENST00000492386 MEIG1Q5JSS6 88 aa11.4□□□□□ -0.58
SEMA4D-220ENST00000492386 CSNK1G2-AS1Q8NCQ2 148 aa11.4□□□□□ -0.58
SEMA4D-220ENST00000492386 TRGV2A0A075B6R0 118 aa11.4□□□□□ -0.58
SEMA4D-220ENST00000492386 NBPF19A0A087WUL8 3843 aa11.4□□□□□ -0.58
SEMA4D-220ENST00000492386 IGLV1-51P01701 117 aa11.4□□□□□ -0.58
SEMA4D-220ENST00000492386 COPS9Q8WXC6 57 aa11.4□□□□□ -0.58
SEMA4D-220ENST00000492386 TRBV6-4A0A1B0GX49 114 aa11.39□□□□□ -0.59
SEMA4D-220ENST00000492386 HERV-K104P63124 156 aa11.39□□□□□ -0.59
SEMA4D-220ENST00000492386 SHISA2Q6UWI4 295 aa11.39□□□□□ -0.59
SEMA4D-220ENST00000492386 FAM110AQ9BQ89 295 aa11.39□□□□□ -0.59
SEMA4D-220ENST00000492386 OVOL2Q9BRP0 275 aa11.39□□□□□ -0.59
SEMA4D-220ENST00000492386 CRLF1O75462 422 aa11.39□□□□□ -0.59
SEMA4D-220ENST00000492386 KRTAP1-1Q07627 177 aa11.39□□□□□ -0.59
SEMA4D-220ENST00000492386 C16orf95Q9H693 158 aa11.39□□□□□ -0.59
SEMA4D-220ENST00000492386 PLA2G2AP14555 144 aa11.38□□□□□ -0.59
SEMA4D-220ENST00000492386 DEFB121Q5J5C9 76 aa11.38□□□□□ -0.59
SEMA4D-220ENST00000492386 COX7A2LO14548 114 aa11.38□□□□□ -0.59
SEMA4D-220ENST00000492386 SNCGO76070 127 aa11.36□□□□□ -0.59
SEMA4D-220ENST00000492386 RNASE1P07998 156 aaKnown RBP11.36□□□□□ -0.59
SEMA4D-220ENST00000492386 PPDPFQ9H3Y8 114 aa11.36□□□□□ -0.59
SEMA4D-220ENST00000492386 TRGV4A0A0C4DH28 118 aa11.35□□□□□ -0.59
SEMA4D-220ENST00000492386 GAGE6Q13070 117 aa11.35□□□□□ -0.59
SEMA4D-220ENST00000492386 HIST2H2BCQ6DN03 193 aa11.35□□□□□ -0.59
SEMA4D-220ENST00000492386 FHL2Q14192 279 aa11.34□□□□□ -0.59
SEMA4D-220ENST00000492386 PDZD2O15018 2839 aa11.34□□□□□ -0.59
SEMA4D-220ENST00000492386 TRAV26-1A0A087WT03 109 aa11.34□□□□□ -0.59
SEMA4D-220ENST00000492386 TENM4Q6N022 2769 aa11.33□□□□□ -0.6
SEMA4D-220ENST00000492386 IGLV4-60A0A075B6I1 120 aa11.33□□□□□ -0.6
SEMA4D-220ENST00000492386 GAGE2BQ13066 116 aa11.33□□□□□ -0.6
SEMA4D-220ENST00000492386 GAGE2EQ4V326 116 aa11.33□□□□□ -0.6
SEMA4D-220ENST00000492386 C15orf53Q8NAA6 179 aa11.33□□□□□ -0.6
SEMA4D-220ENST00000492386 COX7B2Q8TF08 81 aa11.33□□□□□ -0.6
SEMA4D-220ENST00000492386 GAGE2DQ9UEU5 116 aa11.33□□□□□ -0.6
SEMA4D-220ENST00000492386 ACANP16112 2415 aa11.33□□□□□ -0.6
SEMA4D-220ENST00000492386 TRBV6-8A0A0A6YYG3 113 aa11.32□□□□□ -0.6
SEMA4D-220ENST00000492386 FAM240AA0A1B0GVK7 77 aa11.32□□□□□ -0.6
SEMA4D-220ENST00000492386 ANAPC13Q9BS18 74 aa11.32□□□□□ -0.6
SEMA4D-220ENST00000492386 MTORP42345 2549 aa11.31□□□□□ -0.6
SEMA4D-220ENST00000492386 IGKV3OR2-268A0A0C4DH90 116 aa11.31□□□□□ -0.6
SEMA4D-220ENST00000492386 Q6Q795 121 aa11.31□□□□□ -0.6
SEMA4D-220ENST00000492386 IGHV3OR16-9A0A0B4J2B5 98 aa11.3□□□□□ -0.6
SEMA4D-220ENST00000492386 TRACP01848 142 aa11.3□□□□□ -0.6
SEMA4D-220ENST00000492386 NHLRC4P0CG21 123 aaPredicted RBP11.3□□□□□ -0.6
SEMA4D-220ENST00000492386 MIR7-3HGQ8N6C7 128 aa11.3□□□□□ -0.6
SEMA4D-220ENST00000492386 TOMM7Q9P0U1 55 aa11.3□□□□□ -0.6
SEMA4D-220ENST00000492386 FAM218AQ96MZ4 157 aa11.29□□□□□ -0.6
SEMA4D-220ENST00000492386 CHCHD5Q9BSY4 110 aa11.29□□□□□ -0.6
SEMA4D-220ENST00000492386 MRPL23Q16540 153 aaKnown RBP11.28□□□□□ -0.6
SEMA4D-220ENST00000492386 TTC32Q5I0X7 151 aa11.28□□□□□ -0.6
SEMA4D-220ENST00000492386 LINC00337Q8N6G1 96 aa11.28□□□□□ -0.6
SEMA4D-220ENST00000492386 IGKV2-28A0A075B6P5 120 aa11.27□□□□□ -0.6
SEMA4D-220ENST00000492386 TRAV13-2A0A0B4J235 113 aa11.27□□□□□ -0.6
SEMA4D-220ENST00000492386 IGKV2D-28P01615 120 aa11.27□□□□□ -0.6
SEMA4D-220ENST00000492386 PF4P02776 101 aa11.27□□□□□ -0.6
SEMA4D-220ENST00000492386 NDUFV3P56181 108 aaKnown RBP11.27□□□□□ -0.6
SEMA4D-220ENST00000492386 FAM222AQ5U5X8 452 aa11.27□□□□□ -0.6
SEMA4D-220ENST00000492386 A0A087WZ39 114 aa11.26□□□□□ -0.61
SEMA4D-220ENST00000492386 RPL28P46779 137 aaKnown RBP11.26□□□□□ -0.61
SEMA4D-220ENST00000492386 SND1-IT1Q9HBX3 110 aa11.26□□□□□ -0.61
SEMA4D-220ENST00000492386 C22orf24Q9Y442 160 aa11.26□□□□□ -0.61
SEMA4D-220ENST00000492386 ANK3Q12955 4377 aaKnown RBP11.26□□□□□ -0.61
SEMA4D-220ENST00000492386 CRPP02741 224 aa11.25□□□□□ -0.61
SEMA4D-220ENST00000492386 HILS1P60008 231 aa11.25□□□□□ -0.61
SEMA4D-220ENST00000492386 BAALC-AS2P0C853 105 aa11.25□□□□□ -0.61
SEMA4D-220ENST00000492386 DEFB130BP0DP73 79 aa11.25□□□□□ -0.61
SEMA4D-220ENST00000492386 DEFB130AP0DP74 79 aa11.25□□□□□ -0.61
SEMA4D-220ENST00000492386 LINC00612Q8N6U2 182 aa11.25□□□□□ -0.61
SEMA4D-220ENST00000492386 LINC00158P58513 81 aa11.24□□□□□ -0.61
SEMA4D-220ENST00000492386 KIR2DL5BQ8NHK3 375 aa11.24□□□□□ -0.61
SEMA4D-220ENST00000492386 CCL18P55774 89 aa11.24□□□□□ -0.61
SEMA4D-220ENST00000492386 C5orf38Q86SI9 138 aa11.24□□□□□ -0.61
SEMA4D-220ENST00000492386 ITPR2Q14571 2701 aa11.23□□□□□ -0.61
SEMA4D-220ENST00000492386 LINC00959A0A1B0GUT2 108 aa11.23□□□□□ -0.61
SEMA4D-220ENST00000492386 IBA57-AS1B1ANH7 110 aa11.23□□□□□ -0.61
SEMA4D-220ENST00000492386 KRTAP10-3P60369 221 aa11.22□□□□□ -0.61
SEMA4D-220ENST00000492386 ACYP1P07311 99 aa11.21□□□□□ -0.61
SEMA4D-220ENST00000492386 GYPEP15421 78 aa11.21□□□□□ -0.62
SEMA4D-220ENST00000492386 SMIM11BQ8TCY0 68 aa11.2□□□□□ -0.62
SEMA4D-220ENST00000492386 Q9HAA7 133 aa11.2□□□□□ -0.62
SEMA4D-220ENST00000492386 PFN2P35080 140 aa11.2□□□□□ -0.62
SEMA4D-220ENST00000492386 FN1P02751 2386 aaKnown RBP11.19□□□□□ -0.62
SEMA4D-220ENST00000492386 TRBV7-7A0A0K0K1E9 115 aa11.19□□□□□ -0.62
SEMA4D-220ENST00000492386 X6R8D5 127 aa11.19□□□□□ -0.62
SEMA4D-220ENST00000492386 LINC00482Q8N8I6 264 aa11.19□□□□□ -0.62
SEMA4D-220ENST00000492386 GCN1Q92616 2671 aaKnown RBP11.19□□□□□ -0.62
SEMA4D-220ENST00000492386 A0A1B0GUV1 79 aa11.18□□□□□ -0.62
SEMA4D-220ENST00000492386 SMCR5Q8TEV8 140 aa11.18□□□□□ -0.62
SEMA4D-220ENST00000492386 A0A087WYN8 130 aa11.17□□□□□ -0.62
SEMA4D-220ENST00000492386 MALP21145 153 aa11.17□□□□□ -0.62
SEMA4D-220ENST00000492386 XCL1P47992 114 aa11.17□□□□□ -0.62
SEMA4D-220ENST00000492386 C6orf226Q5I0X4 101 aa11.16□□□□□ -0.62
SEMA4D-220ENST00000492386 C11orf68Q9H3H3 251 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms