RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 FAM222AQ5U5X8 452 aa4.5□□□□□ -1.69
SF3A3-208ENST00000489537 Q6ZSN1 163 aa4.5□□□□□ -1.69
SF3A3-208ENST00000489537 GTF2H5Q6ZYL4 71 aa4.5□□□□□ -1.69
SF3A3-208ENST00000489537 PCP2Q8IVA1 136 aa4.5□□□□□ -1.69
SF3A3-208ENST00000489537 CEND1Q8N111 149 aa4.5□□□□□ -1.69
SF3A3-208ENST00000489537 PHLDA1Q8WV24 401 aaPredicted RBP4.5□□□□□ -1.69
SF3A3-208ENST00000489537 COX11Q9Y6N1 276 aa4.5□□□□□ -1.69
SF3A3-208ENST00000489537 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.49□□□□□ -1.69
SF3A3-208ENST00000489537 IGHV4-28A0A0C4DH34 117 aa4.49□□□□□ -1.69
SF3A3-208ENST00000489537 A0A0J9YXV3 536 aa4.49□□□□□ -1.69
SF3A3-208ENST00000489537 A0A0J9YXY3 114 aa4.49□□□□□ -1.69
SF3A3-208ENST00000489537 TIMM17BO60830 172 aa4.49□□□□□ -1.69
SF3A3-208ENST00000489537 PRM2P04554 102 aa4.49□□□□□ -1.69
SF3A3-208ENST00000489537 LINC00694P0DN24 101 aa4.49□□□□□ -1.69
SF3A3-208ENST00000489537 IFITM1P13164 125 aa4.49□□□□□ -1.69
SF3A3-208ENST00000489537 GYPEP15421 78 aa4.49□□□□□ -1.69
SF3A3-208ENST00000489537 UBE2D1P51668 147 aa4.49□□□□□ -1.69
SF3A3-208ENST00000489537 HERV-K104P63124 156 aa4.49□□□□□ -1.69
SF3A3-208ENST00000489537 RPL24P83731 157 aaKnown RBP4.49□□□□□ -1.69
SF3A3-208ENST00000489537 LINC01561Q8N1V8 128 aa4.49□□□□□ -1.69
SF3A3-208ENST00000489537 LINC00469Q8N7U9 141 aa4.49□□□□□ -1.69
SF3A3-208ENST00000489537 CHCHD5Q9BSY4 110 aa4.49□□□□□ -1.69
SF3A3-208ENST00000489537 PPDPFQ9H3Y8 114 aa4.49□□□□□ -1.69
SF3A3-208ENST00000489537 ICOSQ9Y6W8 199 aa4.49□□□□□ -1.69
SF3A3-208ENST00000489537 HUWE1Q7Z6Z7 4374 aaKnown RBP4.48□□□□□ -1.69
SF3A3-208ENST00000489537 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.48□□□□□ -1.69
SF3A3-208ENST00000489537 IGKV2D-26A0A0A0MRZ7 120 aa4.48□□□□□ -1.69
SF3A3-208ENST00000489537 IGKV2-29A2NJV5 120 aaPredicted RBP4.48□□□□□ -1.69
SF3A3-208ENST00000489537 SS18Q15532 418 aa4.48□□□□□ -1.69
SF3A3-208ENST00000489537 SBSPONQ8IVN8 264 aa4.48□□□□□ -1.69
SF3A3-208ENST00000489537 Q8NAQ8 132 aa4.48□□□□□ -1.69
SF3A3-208ENST00000489537 VSIG2Q96IQ7 327 aa4.48□□□□□ -1.69
SF3A3-208ENST00000489537 CDC42SE2Q9NRR3 84 aa4.48□□□□□ -1.69
SF3A3-208ENST00000489537 IGHV3-38A0A0C4DH36 116 aa4.47□□□□□ -1.69
SF3A3-208ENST00000489537 A0A1B0GV90 55 aa4.47□□□□□ -1.69
SF3A3-208ENST00000489537 G3V4G9 280 aa4.47□□□□□ -1.69
SF3A3-208ENST00000489537 IGHV3-30-3P0DP02 117 aa4.47□□□□□ -1.69
SF3A3-208ENST00000489537 FABP2P12104 132 aa4.47□□□□□ -1.69
SF3A3-208ENST00000489537 ZFAND6Q6FIF0 208 aa4.47□□□□□ -1.69
SF3A3-208ENST00000489537 Q6ZUT4 128 aa4.47□□□□□ -1.69
SF3A3-208ENST00000489537 KRTAP3-1Q9BYR8 98 aa4.47□□□□□ -1.69
SF3A3-208ENST00000489537 NDUFA12Q9UI09 145 aa4.47□□□□□ -1.69
SF3A3-208ENST00000489537 A0A0J9YY99 117 aa4.46□□□□□ -1.7
SF3A3-208ENST00000489537 F5H768 121 aa4.46□□□□□ -1.7
SF3A3-208ENST00000489537 NDUFA1O15239 70 aa4.46□□□□□ -1.7
SF3A3-208ENST00000489537 VAMP3Q15836 100 aa4.46□□□□□ -1.7
SF3A3-208ENST00000489537 LELP1Q5T871 98 aa4.46□□□□□ -1.7
SF3A3-208ENST00000489537 NTM-AS1Q6ZSK4 140 aa4.46□□□□□ -1.7
SF3A3-208ENST00000489537 MUC7Q8TAX7 377 aa4.46□□□□□ -1.7
SF3A3-208ENST00000489537 COL7A1Q02388 2944 aa4.45□□□□□ -1.7
SF3A3-208ENST00000489537 SACSQ9NZJ4 4579 aa4.45□□□□□ -1.7
SF3A3-208ENST00000489537 TRAV13-1A0A0B4J241 112 aa4.45□□□□□ -1.7
SF3A3-208ENST00000489537 IGLV5-39A0A0G2JS06 123 aa4.45□□□□□ -1.7
SF3A3-208ENST00000489537 A0A1B0GWB2 263 aa4.45□□□□□ -1.7
SF3A3-208ENST00000489537 TAX1BP3O14907 124 aa4.45□□□□□ -1.7
SF3A3-208ENST00000489537 CXCL5P42830 114 aa4.45□□□□□ -1.7
SF3A3-208ENST00000489537 UBE2V1Q13404 147 aa4.45□□□□□ -1.7
SF3A3-208ENST00000489537 LINC00242Q5T6M2 205 aa4.45□□□□□ -1.7
SF3A3-208ENST00000489537 MAPKAPK5-AS1Q8N8E1 139 aa4.45□□□□□ -1.7
SF3A3-208ENST00000489537 OPRPNQ99935 248 aaPredicted RBP4.45□□□□□ -1.7
SF3A3-208ENST00000489537 TRAV8-4A0A0B4J246 113 aa4.44□□□□□ -1.7
SF3A3-208ENST00000489537 GAGE10A6NGK3 116 aa4.44□□□□□ -1.7
SF3A3-208ENST00000489537 TMEM262E9PQX1 116 aa4.44□□□□□ -1.7
SF3A3-208ENST00000489537 APOMO95445 188 aa4.44□□□□□ -1.7
SF3A3-208ENST00000489537 GAGE6Q13070 117 aa4.44□□□□□ -1.7
SF3A3-208ENST00000489537 KPRPQ5T749 579 aaPredicted RBP4.44□□□□□ -1.7
SF3A3-208ENST00000489537 C15orf53Q8NAA6 179 aa4.44□□□□□ -1.7
SF3A3-208ENST00000489537 SPANXDQ9BXN6 97 aa4.44□□□□□ -1.7
SF3A3-208ENST00000489537 NHP2Q9NX24 153 aaKnown RBP4.44□□□□□ -1.7
SF3A3-208ENST00000489537 SPANXCQ9NY87 97 aa4.44□□□□□ -1.7
SF3A3-208ENST00000489537 TRBV20-1A0A075B6N2 111 aa4.43□□□□□ -1.7
SF3A3-208ENST00000489537 A0A087WZ39 114 aa4.43□□□□□ -1.7
SF3A3-208ENST00000489537 A0A0B4J2C4 111 aa4.43□□□□□ -1.7
SF3A3-208ENST00000489537 PRSS2P07478 247 aa4.43□□□□□ -1.7
SF3A3-208ENST00000489537 TCTAP57738 103 aa4.43□□□□□ -1.7
SF3A3-208ENST00000489537 RBX1P62877 108 aa4.43□□□□□ -1.7
SF3A3-208ENST00000489537 C12orf74Q32Q52 190 aa4.43□□□□□ -1.7
SF3A3-208ENST00000489537 CEMP1Q6PRD7 247 aaPredicted RBP4.43□□□□□ -1.7
SF3A3-208ENST00000489537 FAM104AQ969W3 186 aa4.43□□□□□ -1.7
SF3A3-208ENST00000489537 RAB37Q96AX2 223 aa4.43□□□□□ -1.7
SF3A3-208ENST00000489537 CDKN2A-AS1Q9UH64 79 aa4.43□□□□□ -1.7
SF3A3-208ENST00000489537 NBEAL2Q6ZNJ1 2754 aa4.43□□□□□ -1.7
SF3A3-208ENST00000489537 DYNC2H1Q8NCM8 4307 aaKnown RBP4.42□□□□□ -1.7
SF3A3-208ENST00000489537 RYR2Q92736 4967 aa4.42□□□□□ -1.7
SF3A3-208ENST00000489537 LOC100131303A0A0U1RQF7 123 aa4.42□□□□□ -1.7
SF3A3-208ENST00000489537 A0A1W2PPM0 123 aa4.42□□□□□ -1.7
SF3A3-208ENST00000489537 SMIM1B2RUZ4 78 aa4.42□□□□□ -1.7
SF3A3-208ENST00000489537 F8WDY8 70 aa4.42□□□□□ -1.7
SF3A3-208ENST00000489537 K7EP13 123 aa4.42□□□□□ -1.7
SF3A3-208ENST00000489537 IGHV3-30P01768 117 aa4.42□□□□□ -1.7
SF3A3-208ENST00000489537 COX6CP09669 75 aa4.42□□□□□ -1.7
SF3A3-208ENST00000489537 IGHV3-30-5P0DP03 117 aa4.42□□□□□ -1.7
SF3A3-208ENST00000489537 FXYD2P54710 66 aa4.42□□□□□ -1.7
SF3A3-208ENST00000489537 KRTAP10-11P60412 298 aa4.42□□□□□ -1.7
SF3A3-208ENST00000489537 MIAQ16674 131 aa4.42□□□□□ -1.7
SF3A3-208ENST00000489537 CD164L2Q6UWJ8 174 aa4.42□□□□□ -1.7
SF3A3-208ENST00000489537 C11orf45Q8TAV5 145 aa4.42□□□□□ -1.7
SF3A3-208ENST00000489537 COX7B2Q8TF08 81 aa4.42□□□□□ -1.7
SF3A3-208ENST00000489537 DEFB104AQ8WTQ1 72 aa4.42□□□□□ -1.7
SF3A3-208ENST00000489537 Q9UF83 564 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms