RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 TTC32Q5I0X7 151 aa9.53□□□□□ -0.88
CHD1L-208ENST00000488864 UBE2WQ96B02 151 aa9.53□□□□□ -0.88
CHD1L-208ENST00000488864 H7C423 109 aa9.52□□□□□ -0.89
CHD1L-208ENST00000488864 IFITM1P13164 125 aa9.52□□□□□ -0.89
CHD1L-208ENST00000488864 C2orf82Q6UX34 121 aa9.52□□□□□ -0.89
CHD1L-208ENST00000488864 TIMM21Q9BVV7 248 aa9.52□□□□□ -0.89
CHD1L-208ENST00000488864 DNAH3Q8TD57 4116 aa9.52□□□□□ -0.89
CHD1L-208ENST00000488864 ICOSQ9Y6W8 199 aa9.52□□□□□ -0.89
CHD1L-208ENST00000488864 CLEC2BQ92478 149 aa9.51□□□□□ -0.89
CHD1L-208ENST00000488864 IGHV3-73A0A0B4J1V6 119 aa9.51□□□□□ -0.89
CHD1L-208ENST00000488864 GAGE12JA6NER3 117 aa9.51□□□□□ -0.89
CHD1L-208ENST00000488864 GAGE7O76087 117 aa9.51□□□□□ -0.89
CHD1L-208ENST00000488864 GAGE12FP0CL80 117 aa9.51□□□□□ -0.89
CHD1L-208ENST00000488864 GAGE12GP0CL81 117 aa9.51□□□□□ -0.89
CHD1L-208ENST00000488864 GAGE12IP0CL82 117 aa9.51□□□□□ -0.89
CHD1L-208ENST00000488864 GAGE4Q13068 117 aa9.51□□□□□ -0.89
CHD1L-208ENST00000488864 IGHV1OR15-1A0A075B7D0 117 aa9.5□□□□□ -0.89
CHD1L-208ENST00000488864 INSP01308 110 aa9.5□□□□□ -0.89
CHD1L-208ENST00000488864 Q6Q795 121 aa9.5□□□□□ -0.89
CHD1L-208ENST00000488864 C1orf158Q8N1D5 194 aa9.5□□□□□ -0.89
CHD1L-208ENST00000488864 LINC01587Q99440 93 aa9.5□□□□□ -0.89
CHD1L-208ENST00000488864 MRPS36P82909 103 aaKnown RBP9.49□□□□□ -0.89
CHD1L-208ENST00000488864 KRTAP21-3Q3LHN1 58 aa9.49□□□□□ -0.89
CHD1L-208ENST00000488864 Q9UF83 564 aa9.49□□□□□ -0.89
CHD1L-208ENST00000488864 NDUFA12Q9UI09 145 aa9.48□□□□□ -0.89
CHD1L-208ENST00000488864 IGHV1-58A0A0C4DH39 117 aa9.48□□□□□ -0.89
CHD1L-208ENST00000488864 SPANXDQ9BXN6 97 aa9.48□□□□□ -0.89
CHD1L-208ENST00000488864 SPANXCQ9NY87 97 aa9.48□□□□□ -0.89
CHD1L-208ENST00000488864 MIAQ16674 131 aa9.47□□□□□ -0.89
CHD1L-208ENST00000488864 CSNK1G2-AS1Q8NCQ2 148 aa9.47□□□□□ -0.89
CHD1L-208ENST00000488864 PYGO1Q9Y3Y4 419 aa9.47□□□□□ -0.89
CHD1L-208ENST00000488864 DEFB135Q30KP9 77 aa9.46□□□□□ -0.89
CHD1L-208ENST00000488864 DAND5Q8N907 189 aa9.46□□□□□ -0.89
CHD1L-208ENST00000488864 VSIG2Q96IQ7 327 aa9.46□□□□□ -0.89
CHD1L-208ENST00000488864 H3BT86 120 aa9.45□□□□□ -0.9
CHD1L-208ENST00000488864 LST1O00453 97 aa9.45□□□□□ -0.9
CHD1L-208ENST00000488864 COX6CP09669 75 aa9.44□□□□□ -0.9
CHD1L-208ENST00000488864 APOC4P55056 127 aa9.44□□□□□ -0.9
CHD1L-208ENST00000488864 Q6ZSN1 163 aa9.44□□□□□ -0.9
CHD1L-208ENST00000488864 K7EIL1 84 aa9.44□□□□□ -0.9
CHD1L-208ENST00000488864 DEFB121Q5J5C9 76 aa9.44□□□□□ -0.9
CHD1L-208ENST00000488864 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.43□□□□□ -0.9
CHD1L-208ENST00000488864 IGKV2-29A2NJV5 120 aaPredicted RBP9.43□□□□□ -0.9
CHD1L-208ENST00000488864 KIR2DL5BQ8NHK3 375 aa9.43□□□□□ -0.9
CHD1L-208ENST00000488864 CHCHD7Q9BUK0 85 aa9.43□□□□□ -0.9
CHD1L-208ENST00000488864 TINCRA0A1B0GVN0 87 aa9.43□□□□□ -0.9
CHD1L-208ENST00000488864 KPRPQ5T749 579 aaPredicted RBP9.43□□□□□ -0.9
CHD1L-208ENST00000488864 CHCHD5Q9BSY4 110 aa9.43□□□□□ -0.9
CHD1L-208ENST00000488864 UBE2D4Q9Y2X8 147 aa9.42□□□□□ -0.9
CHD1L-208ENST00000488864 TNFRSF18Q9Y5U5 241 aa9.42□□□□□ -0.9
CHD1L-208ENST00000488864 TRGV11A0A075B6L2 103 aa9.42□□□□□ -0.9
CHD1L-208ENST00000488864 MRAPQ8TCY5 172 aa9.41□□□□□ -0.9
CHD1L-208ENST00000488864 IGHV3-38A0A0C4DH36 116 aa9.41□□□□□ -0.9
CHD1L-208ENST00000488864 MRPL23Q16540 153 aaKnown RBP9.41□□□□□ -0.9
CHD1L-208ENST00000488864 SMIM20Q8N5G0 67 aa9.41□□□□□ -0.9
CHD1L-208ENST00000488864 LINC00467Q9BRT7 94 aa9.41□□□□□ -0.9
CHD1L-208ENST00000488864 RETNQ9HD89 108 aa9.41□□□□□ -0.9
CHD1L-208ENST00000488864 NACAE9PAV3 2078 aa9.4□□□□□ -0.9
CHD1L-208ENST00000488864 MEIG1Q5JSS6 88 aa9.4□□□□□ -0.9
CHD1L-208ENST00000488864 C11orf72Q8NBR9 251 aa9.4□□□□□ -0.9
CHD1L-208ENST00000488864 EDA2RQ9HAV5 297 aa9.4□□□□□ -0.9
CHD1L-208ENST00000488864 CDKN2A-AS1Q9UH64 79 aa9.4□□□□□ -0.9
CHD1L-208ENST00000488864 DEFB4AO15263 64 aa9.4□□□□□ -0.91
CHD1L-208ENST00000488864 TENM3Q9P273 2699 aa9.4□□□□□ -0.91
CHD1L-208ENST00000488864 FAM240AA0A1B0GVK7 77 aa9.39□□□□□ -0.91
CHD1L-208ENST00000488864 TMEM101Q96IK0 257 aa9.39□□□□□ -0.91
CHD1L-208ENST00000488864 X6R8D5 127 aa9.39□□□□□ -0.91
CHD1L-208ENST00000488864 ZNF415Q09FC8 603 aa9.39□□□□□ -0.91
CHD1L-208ENST00000488864 A0A0U1RRA0 63 aa9.38□□□□□ -0.91
CHD1L-208ENST00000488864 TIMM17BO60830 172 aa9.38□□□□□ -0.91
CHD1L-208ENST00000488864 COX6A2Q02221 97 aa9.38□□□□□ -0.91
CHD1L-208ENST00000488864 SPANXA1Q9NS26 97 aa9.38□□□□□ -0.91
CHD1L-208ENST00000488864 HERV-K104P63124 156 aa9.37□□□□□ -0.91
CHD1L-208ENST00000488864 ZNF625Q96I27 306 aaPredicted RBP9.37□□□□□ -0.91
CHD1L-208ENST00000488864 NOP10Q9NPE3 64 aaKnown RBP9.37□□□□□ -0.91
CHD1L-208ENST00000488864 TRBV7-7A0A0K0K1E9 115 aa9.37□□□□□ -0.91
CHD1L-208ENST00000488864 PLAC8L1A1L4L8 177 aa9.37□□□□□ -0.91
CHD1L-208ENST00000488864 NDUFA1O15239 70 aa9.36□□□□□ -0.91
CHD1L-208ENST00000488864 LINC00308Q8TCZ7 52 aa9.36□□□□□ -0.91
CHD1L-208ENST00000488864 SMCR5Q8TEV8 140 aa9.36□□□□□ -0.91
CHD1L-208ENST00000488864 C16orf74Q96GX8 76 aa9.36□□□□□ -0.91
CHD1L-208ENST00000488864 OVOL2Q9BRP0 275 aa9.36□□□□□ -0.91
CHD1L-208ENST00000488864 TRGV1A0A0A0MS02 117 aa9.35□□□□□ -0.91
CHD1L-208ENST00000488864 SOSTDC1Q6X4U4 206 aa9.35□□□□□ -0.91
CHD1L-208ENST00000488864 Q6ZTI0 123 aa9.35□□□□□ -0.91
CHD1L-208ENST00000488864 MEGF8Q7Z7M0 2845 aa9.35□□□□□ -0.91
CHD1L-208ENST00000488864 IGHV4-28A0A0C4DH34 117 aa9.34□□□□□ -0.91
CHD1L-208ENST00000488864 Q9H8V8 135 aa9.34□□□□□ -0.91
CHD1L-208ENST00000488864 IGLV5-45A0A087WSX0 123 aa9.34□□□□□ -0.91
CHD1L-208ENST00000488864 TIRAPP58753 221 aa9.34□□□□□ -0.91
CHD1L-208ENST00000488864 FAM236AA0A1B0GUQ0 79 aa9.33□□□□□ -0.92
CHD1L-208ENST00000488864 FAM236BA0A1B0GV22 79 aa9.33□□□□□ -0.92
CHD1L-208ENST00000488864 IL17DQ8TAD2 202 aa9.33□□□□□ -0.92
CHD1L-208ENST00000488864 COX7A2LO14548 114 aa9.33□□□□□ -0.92
CHD1L-208ENST00000488864 Q8NAQ8 132 aa9.33□□□□□ -0.92
CHD1L-208ENST00000488864 PRKDCP78527 4128 aaKnown RBP9.33□□□□□ -0.92
CHD1L-208ENST00000488864 SMIM9A6NGZ8 99 aa9.32□□□□□ -0.92
CHD1L-208ENST00000488864 CIRBPQ14011 172 aaKnown RBP9.32□□□□□ -0.92
CHD1L-208ENST00000488864 HUWE1Q7Z6Z7 4374 aaKnown RBP9.32□□□□□ -0.92
CHD1L-208ENST00000488864 DEFB130BP0DP73 79 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms