RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 CST7O76096 145 aa1.63□□□□□ -2.15
DEPDC1-203ENST00000488146 IFNA1P01562 189 aa1.63□□□□□ -2.15
DEPDC1-203ENST00000488146 APCSP02743 223 aa1.63□□□□□ -2.15
DEPDC1-203ENST00000488146 LSM3P62310 102 aaKnown RBP1.63□□□□□ -2.15
DEPDC1-203ENST00000488146 EIF5AL1Q6IS14 154 aaKnown RBP1.63□□□□□ -2.15
DEPDC1-203ENST00000488146 SMIM15Q7Z3B0 74 aa1.63□□□□□ -2.15
DEPDC1-203ENST00000488146 NUP35Q8NFH5 326 aa1.63□□□□□ -2.15
DEPDC1-203ENST00000488146 PACRGQ96M98 296 aaPredicted RBP1.63□□□□□ -2.15
DEPDC1-203ENST00000488146 C20orf78Q9BR46 151 aa1.63□□□□□ -2.15
DEPDC1-203ENST00000488146 DERL1Q9BUN8 251 aa1.63□□□□□ -2.15
DEPDC1-203ENST00000488146 JPT2Q9H910 190 aa1.63□□□□□ -2.15
DEPDC1-203ENST00000488146 FAT4Q6V0I7 4981 aa1.63□□□□□ -2.15
DEPDC1-203ENST00000488146 HMSDA8MTL9 139 aa1.63□□□□□ -2.15
DEPDC1-203ENST00000488146 E9PLD3 99 aa1.63□□□□□ -2.15
DEPDC1-203ENST00000488146 I3L3M4 83 aa1.63□□□□□ -2.15
DEPDC1-203ENST00000488146 UPK1BO75841 260 aa1.63□□□□□ -2.15
DEPDC1-203ENST00000488146 SIX6O95475 246 aa1.63□□□□□ -2.15
DEPDC1-203ENST00000488146 PRM2P04554 102 aa1.63□□□□□ -2.15
DEPDC1-203ENST00000488146 S100A8P05109 93 aa1.63□□□□□ -2.15
DEPDC1-203ENST00000488146 KRTAP1-4P0C5Y4 121 aa1.63□□□□□ -2.15
DEPDC1-203ENST00000488146 HTN1P15515 57 aa1.63□□□□□ -2.15
DEPDC1-203ENST00000488146 CCL20P78556 96 aa1.63□□□□□ -2.15
DEPDC1-203ENST00000488146 C9orf62Q8N4C0 152 aa1.63□□□□□ -2.15
DEPDC1-203ENST00000488146 GPR98Q8WXG9 6306 aa1.63□□□□□ -2.15
DEPDC1-203ENST00000488146 SRRM2Q9UQ35 2752 aaKnown RBP1.63□□□□□ -2.15
DEPDC1-203ENST00000488146 FAM240BA0A1B0GVZ2 78 aa1.63□□□□□ -2.15
DEPDC1-203ENST00000488146 TMEM238C9JI98 176 aa1.63□□□□□ -2.15
DEPDC1-203ENST00000488146 MT-ND6P03923 174 aa1.63□□□□□ -2.15
DEPDC1-203ENST00000488146 BCL2P10415 239 aa1.63□□□□□ -2.15
DEPDC1-203ENST00000488146 RPL28P46779 137 aaKnown RBP1.63□□□□□ -2.15
DEPDC1-203ENST00000488146 CRIP1P50238 77 aa1.63□□□□□ -2.15
DEPDC1-203ENST00000488146 SEC11AP67812 179 aa1.63□□□□□ -2.15
DEPDC1-203ENST00000488146 C6orf226Q5I0X4 101 aa1.63□□□□□ -2.15
DEPDC1-203ENST00000488146 LINC01551Q86U37 167 aa1.63□□□□□ -2.15
DEPDC1-203ENST00000488146 AMN1Q8IY45 258 aa1.63□□□□□ -2.15
DEPDC1-203ENST00000488146 C15orf54Q8N8G6 183 aa1.63□□□□□ -2.15
DEPDC1-203ENST00000488146 PPP1R1CQ8WVI7 109 aa1.63□□□□□ -2.15
DEPDC1-203ENST00000488146 BTF3L4Q96K17 158 aa1.63□□□□□ -2.15
DEPDC1-203ENST00000488146 SMDT1Q9H4I9 107 aa1.63□□□□□ -2.15
DEPDC1-203ENST00000488146 LINC00959A0A1B0GUT2 108 aa1.62□□□□□ -2.15
DEPDC1-203ENST00000488146 LINC00862A6NCI5 91 aa1.62□□□□□ -2.15
DEPDC1-203ENST00000488146 C1orf196B1AJZ1 125 aa1.62□□□□□ -2.15
DEPDC1-203ENST00000488146 H3BVH4 76 aa1.62□□□□□ -2.15
DEPDC1-203ENST00000488146 ZNF861PO60384 105 aa1.62□□□□□ -2.15
DEPDC1-203ENST00000488146 CHTF8P0CG12 524 aa1.62□□□□□ -2.15
DEPDC1-203ENST00000488146 ZNF56Q15929 161 aa1.62□□□□□ -2.15
DEPDC1-203ENST00000488146 AKR1C8PQ5T2L2 129 aa1.62□□□□□ -2.15
DEPDC1-203ENST00000488146 LINC00269Q8N2A0 174 aa1.62□□□□□ -2.15
DEPDC1-203ENST00000488146 ENKURQ8TC29 256 aa1.62□□□□□ -2.15
DEPDC1-203ENST00000488146 CHCHD10Q8WYQ3 142 aaPredicted RBP1.62□□□□□ -2.15
DEPDC1-203ENST00000488146 NUDT15Q9NV35 164 aa1.62□□□□□ -2.15
DEPDC1-203ENST00000488146 ZNF706Q9Y5V0 76 aaPredicted RBP1.62□□□□□ -2.15
DEPDC1-203ENST00000488146 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.62□□□□□ -2.15
DEPDC1-203ENST00000488146 INMT-MINDY4F8WBC2 141 aa1.62□□□□□ -2.15
DEPDC1-203ENST00000488146 TMEM250H0YL14 139 aa1.62□□□□□ -2.15
DEPDC1-203ENST00000488146 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.62□□□□□ -2.15
DEPDC1-203ENST00000488146 COX7A2LO14548 114 aa1.62□□□□□ -2.15
DEPDC1-203ENST00000488146 NDUFA1O15239 70 aa1.62□□□□□ -2.15
DEPDC1-203ENST00000488146 PPBPP02775 128 aa1.62□□□□□ -2.15
DEPDC1-203ENST00000488146 MEF2BQ02080 365 aaPredicted RBP1.62□□□□□ -2.15
DEPDC1-203ENST00000488146 SPANXN1Q5VSR9 72 aa1.62□□□□□ -2.15
DEPDC1-203ENST00000488146 Q6ZN92 141 aa1.62□□□□□ -2.15
DEPDC1-203ENST00000488146 KRTAP13-1Q8IUC0 172 aa1.62□□□□□ -2.15
DEPDC1-203ENST00000488146 Q8N377 158 aa1.62□□□□□ -2.15
DEPDC1-203ENST00000488146 GTSF1Q8WW33 167 aa1.62□□□□□ -2.15
DEPDC1-203ENST00000488146 TMEM191AQ9H0A3 160 aa1.62□□□□□ -2.15
DEPDC1-203ENST00000488146 RPP21Q9H633 154 aaKnown RBP1.62□□□□□ -2.15
DEPDC1-203ENST00000488146 CDC42SE2Q9NRR3 84 aa1.62□□□□□ -2.15
DEPDC1-203ENST00000488146 CBY1Q9Y3M2 126 aa1.62□□□□□ -2.15
DEPDC1-203ENST00000488146 RNF213Q63HN8 5207 aa1.61□□□□□ -2.15
DEPDC1-203ENST00000488146 LRP1Q07954 4544 aaKnown RBP1.61□□□□□ -2.15
DEPDC1-203ENST00000488146 A0A096LNI7 61 aa1.61□□□□□ -2.15
DEPDC1-203ENST00000488146 MAP1LC3B2A6NCE7 125 aa1.61□□□□□ -2.15
DEPDC1-203ENST00000488146 BCE1O60756 84 aa1.61□□□□□ -2.15
DEPDC1-203ENST00000488146 EIF3GO75821 320 aaKnown RBP eCLIP1.61□□□□□ -2.15
DEPDC1-203ENST00000488146 UBE2D1P51668 147 aa1.61□□□□□ -2.15
DEPDC1-203ENST00000488146 POLR2KP53803 58 aaKnown RBP1.61□□□□□ -2.15
DEPDC1-203ENST00000488146 CXCL6P80162 114 aa1.61□□□□□ -2.15
DEPDC1-203ENST00000488146 GCSAMLQ5JQS6 135 aa1.61□□□□□ -2.15
DEPDC1-203ENST00000488146 Q6ZQT7 251 aa1.61□□□□□ -2.15
DEPDC1-203ENST00000488146 KCNRGQ8N5I3 272 aa1.61□□□□□ -2.15
DEPDC1-203ENST00000488146 INO80EQ8NBZ0 244 aaPredicted RBP1.61□□□□□ -2.15
DEPDC1-203ENST00000488146 MAP1LC3BQ9GZQ8 125 aa1.61□□□□□ -2.15
DEPDC1-203ENST00000488146 TRBV24-1A0A075B6N3 115 aa1.61□□□□□ -2.15
DEPDC1-203ENST00000488146 PCP4L1A6NKN8 68 aa1.61□□□□□ -2.15
DEPDC1-203ENST00000488146 TMEM262E9PQX1 116 aa1.61□□□□□ -2.15
DEPDC1-203ENST00000488146 HLA-DQA1P01909 254 aa1.61□□□□□ -2.15
DEPDC1-203ENST00000488146 NTF3P20783 257 aa1.61□□□□□ -2.15
DEPDC1-203ENST00000488146 NDUFA12Q9UI09 145 aa1.61□□□□□ -2.15
DEPDC1-203ENST00000488146 BCL2L11O43521 198 aa1.6□□□□□ -2.15
DEPDC1-203ENST00000488146 CRYGAP11844 174 aa1.6□□□□□ -2.15
DEPDC1-203ENST00000488146 ZNF726P1Q15940 193 aa1.6□□□□□ -2.15
DEPDC1-203ENST00000488146 AMMECR1LQ6DCA0 310 aa1.6□□□□□ -2.15
DEPDC1-203ENST00000488146 BAGE2Q86Y30 109 aa1.6□□□□□ -2.15
DEPDC1-203ENST00000488146 Q8IZM0 81 aa1.6□□□□□ -2.15
DEPDC1-203ENST00000488146 OR2D3Q8NGH3 330 aa1.6□□□□□ -2.15
DEPDC1-203ENST00000488146 BORCS7Q96B45 105 aa1.6□□□□□ -2.15
DEPDC1-203ENST00000488146 C7orf77A4D0Y5 90 aa1.6□□□□□ -2.15
DEPDC1-203ENST00000488146 LINC01546A6NGU7 62 aa1.6□□□□□ -2.15
DEPDC1-203ENST00000488146 A8MWL6 223 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms