RNA–Protein interactions for RNA: ENST00000487667.5

PHF1-209, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-209ENST00000487667 LINC00242Q5T6M2 205 aa14.17□□□□□ -0.14
PHF1-209ENST00000487667 K7ERU9 68 aa14.16□□□□□ -0.14
PHF1-209ENST00000487667 TMEM238LA0A1B0GVL6 79 aa14.15□□□□□ -0.14
PHF1-209ENST00000487667 A6NJY4 79 aa14.15□□□□□ -0.14
PHF1-209ENST00000487667 NAA38Q9BRA0 125 aaKnown RBP14.15□□□□□ -0.14
PHF1-209ENST00000487667 TRAV13-1A0A0B4J241 112 aa14.15□□□□□ -0.14
PHF1-209ENST00000487667 IGLL5B9A064 214 aa14.15□□□□□ -0.14
PHF1-209ENST00000487667 K7ERJ3 54 aa14.14□□□□□ -0.15
PHF1-209ENST00000487667 IGHV3-30-3P0DP02 117 aa14.14□□□□□ -0.15
PHF1-209ENST00000487667 TMEM262E9PQX1 116 aa14.13□□□□□ -0.15
PHF1-209ENST00000487667 CDKN2A-AS1Q9UH64 79 aa14.13□□□□□ -0.15
PHF1-209ENST00000487667 K7EIL1 84 aa14.13□□□□□ -0.15
PHF1-209ENST00000487667 TM2D3Q9BRN9 247 aa14.13□□□□□ -0.15
PHF1-209ENST00000487667 SPANXB1Q9NS25 103 aaPredicted RBP14.13□□□□□ -0.15
PHF1-209ENST00000487667 TSPEAR-AS2P59090 65 aa14.12□□□□□ -0.15
PHF1-209ENST00000487667 LELP1Q5T871 98 aa14.12□□□□□ -0.15
PHF1-209ENST00000487667 C11orf45Q8TAV5 145 aa14.11□□□□□ -0.15
PHF1-209ENST00000487667 A0A096LPF7 62 aa14.11□□□□□ -0.15
PHF1-209ENST00000487667 A0A0J9YWU9 116 aa14.11□□□□□ -0.15
PHF1-209ENST00000487667 DNAH3Q8TD57 4116 aa14.1□□□□□ -0.15
PHF1-209ENST00000487667 IGLV4-60A0A075B6I1 120 aa14.1□□□□□ -0.15
PHF1-209ENST00000487667 DEFB121Q5J5C9 76 aa14.1□□□□□ -0.15
PHF1-209ENST00000487667 MGAM2Q2M2H8 2515 aa14.09□□□□□ -0.15
PHF1-209ENST00000487667 IGHV3-64A0A075B6Q5 118 aa14.09□□□□□ -0.15
PHF1-209ENST00000487667 SPINK8P0C7L1 97 aa14.09□□□□□ -0.15
PHF1-209ENST00000487667 COX6A2Q02221 97 aa14.09□□□□□ -0.15
PHF1-209ENST00000487667 SRSF9Q13242 221 aaKnown RBP eCLIP14.09□□□□□ -0.15
PHF1-209ENST00000487667 DNHD1Q96M86 4753 aa14.08□□□□□ -0.15
PHF1-209ENST00000487667 IGLV5-39A0A0G2JS06 123 aa14.08□□□□□ -0.16
PHF1-209ENST00000487667 ZFAND6Q6FIF0 208 aa14.08□□□□□ -0.16
PHF1-209ENST00000487667 NOTCH1P46531 2555 aa14.08□□□□□ -0.16
PHF1-209ENST00000487667 TRAV8-3A0A0A6YYJ7 113 aa14.07□□□□□ -0.16
PHF1-209ENST00000487667 Q6ZTC4 211 aa14.07□□□□□ -0.16
PHF1-209ENST00000487667 SS18Q15532 418 aa14.07□□□□□ -0.16
PHF1-209ENST00000487667 NDUFA12Q9UI09 145 aa14.07□□□□□ -0.16
PHF1-209ENST00000487667 TMEM238C9JI98 176 aa14.06□□□□□ -0.16
PHF1-209ENST00000487667 F8W1H4 67 aa14.05□□□□□ -0.16
PHF1-209ENST00000487667 LINC00959A0A1B0GUT2 108 aa14.04□□□□□ -0.16
PHF1-209ENST00000487667 SMIM1B2RUZ4 78 aa14.04□□□□□ -0.16
PHF1-209ENST00000487667 DEFB131BA0A096LNP1 70 aa14.03□□□□□ -0.16
PHF1-209ENST00000487667 NDUFA1O15239 70 aa14.03□□□□□ -0.16
PHF1-209ENST00000487667 RNF151Q2KHN1 245 aa14.03□□□□□ -0.16
PHF1-209ENST00000487667 LYPD5Q6UWN5 251 aa14.03□□□□□ -0.16
PHF1-209ENST00000487667 NBEAL1Q6ZS30 2694 aa14.02□□□□□ -0.16
PHF1-209ENST00000487667 A0A0J9YXY3 114 aa14.02□□□□□ -0.16
PHF1-209ENST00000487667 LINC01561Q8N1V8 128 aa14.02□□□□□ -0.16
PHF1-209ENST00000487667 IGHV3OR16-9A0A0B4J2B5 98 aa14.02□□□□□ -0.17
PHF1-209ENST00000487667 TIMM17BO60830 172 aa14.02□□□□□ -0.17
PHF1-209ENST00000487667 IGHV3-30P01768 117 aa14.02□□□□□ -0.17
PHF1-209ENST00000487667 IGHV3-30-5P0DP03 117 aa14.02□□□□□ -0.17
PHF1-209ENST00000487667 NANOS2P60321 138 aaKnown RBP14.02□□□□□ -0.17
PHF1-209ENST00000487667 C10orf126Q8N4M7 172 aa14.02□□□□□ -0.17
PHF1-209ENST00000487667 TRAV10A0A0B4J240 114 aa14.01□□□□□ -0.17
PHF1-209ENST00000487667 IGKV3OR2-268A0A0C4DH90 116 aa14.01□□□□□ -0.17
PHF1-209ENST00000487667 MRAPQ8TCY5 172 aa14.01□□□□□ -0.17
PHF1-209ENST00000487667 VPS25Q9BRG1 176 aa14.01□□□□□ -0.17
PHF1-209ENST00000487667 A0A087WZ39 114 aa14□□□□□ -0.17
PHF1-209ENST00000487667 HERV-K104P63124 156 aa14□□□□□ -0.17
PHF1-209ENST00000487667 CIRBPQ14011 172 aaKnown RBP14□□□□□ -0.17
PHF1-209ENST00000487667 LYRM7Q5U5X0 104 aa14□□□□□ -0.17
PHF1-209ENST00000487667 SFTA2Q6UW10 78 aa14□□□□□ -0.17
PHF1-209ENST00000487667 ANGP03950 147 aaKnown RBP13.99□□□□□ -0.17
PHF1-209ENST00000487667 PGPEP1Q9NXJ5 209 aa13.99□□□□□ -0.17
PHF1-209ENST00000487667 LINC00269Q8N2A0 174 aa13.98□□□□□ -0.17
PHF1-209ENST00000487667 C15orf53Q8NAA6 179 aa13.98□□□□□ -0.17
PHF1-209ENST00000487667 REG3AQ06141 175 aa13.97□□□□□ -0.17
PHF1-209ENST00000487667 RPL24P83731 157 aaKnown RBP13.96□□□□□ -0.17
PHF1-209ENST00000487667 SPANXDQ9BXN6 97 aa13.96□□□□□ -0.17
PHF1-209ENST00000487667 SPANXCQ9NY87 97 aa13.96□□□□□ -0.17
PHF1-209ENST00000487667 COPS9Q8WXC6 57 aa13.96□□□□□ -0.18
PHF1-209ENST00000487667 PCP4P48539 62 aa13.95□□□□□ -0.18
PHF1-209ENST00000487667 CD164L2Q6UWJ8 174 aa13.95□□□□□ -0.18
PHF1-209ENST00000487667 COX7B2Q8TF08 81 aa13.95□□□□□ -0.18
PHF1-209ENST00000487667 Q9H8V8 135 aa13.95□□□□□ -0.18
PHF1-209ENST00000487667 H3BMG7 143 aa13.94□□□□□ -0.18
PHF1-209ENST00000487667 TSPAN13O95857 204 aa13.94□□□□□ -0.18
PHF1-209ENST00000487667 CFC1BP0CG36 223 aa13.93□□□□□ -0.18
PHF1-209ENST00000487667 CFC1P0CG37 223 aa13.93□□□□□ -0.18
PHF1-209ENST00000487667 IFITM1P13164 125 aa13.93□□□□□ -0.18
PHF1-209ENST00000487667 XCL1P47992 114 aa13.93□□□□□ -0.18
PHF1-209ENST00000487667 ZNF625Q96I27 306 aaPredicted RBP13.93□□□□□ -0.18
PHF1-209ENST00000487667 PRR34Q9NV39 138 aa13.93□□□□□ -0.18
PHF1-209ENST00000487667 LITAFQ99732 161 aa13.92□□□□□ -0.18
PHF1-209ENST00000487667 B9D2Q9BPU9 175 aa13.92□□□□□ -0.18
PHF1-209ENST00000487667 PRO0461Q9UI25 63 aa13.92□□□□□ -0.18
PHF1-209ENST00000487667 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.92□□□□□ -0.18
PHF1-209ENST00000487667 APOMO95445 188 aa13.92□□□□□ -0.18
PHF1-209ENST00000487667 MIAQ16674 131 aa13.92□□□□□ -0.18
PHF1-209ENST00000487667 PRO1854Q9UHT4 67 aa13.92□□□□□ -0.18
PHF1-209ENST00000487667 CHCHD10Q8WYQ3 142 aaPredicted RBP13.91□□□□□ -0.18
PHF1-209ENST00000487667 TRBV20-1A0A075B6N2 111 aa13.9□□□□□ -0.18
PHF1-209ENST00000487667 TRAV8-4A0A0B4J246 113 aa13.9□□□□□ -0.18
PHF1-209ENST00000487667 A0A0B4J2C4 111 aa13.9□□□□□ -0.18
PHF1-209ENST00000487667 J3QR89 54 aa13.9□□□□□ -0.18
PHF1-209ENST00000487667 C5orf38Q86SI9 138 aa13.9□□□□□ -0.18
PHF1-209ENST00000487667 COX7A2LO14548 114 aa13.9□□□□□ -0.18
PHF1-209ENST00000487667 WFDC2Q14508 124 aa13.9□□□□□ -0.18
PHF1-209ENST00000487667 CLPSL2Q6UWE3 100 aa13.9□□□□□ -0.18
PHF1-209ENST00000487667 CRPP02741 224 aa13.89□□□□□ -0.19
PHF1-209ENST00000487667 ESRGQ1W209 222 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms