RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 UNQ6190/PRO20217Q6UXQ8 127 aa4.44□□□□□ -1.7
PDPN-205ENST00000487038 PPDPFQ9H3Y8 114 aa4.44□□□□□ -1.7
PDPN-205ENST00000487038 TGIF2-C20orf24A0A0A6YYL0 155 aa4.43□□□□□ -1.7
PDPN-205ENST00000487038 VCYO14598 125 aa4.43□□□□□ -1.7
PDPN-205ENST00000487038 BCE1O60756 84 aa4.43□□□□□ -1.7
PDPN-205ENST00000487038 PPP1R17O96001 155 aa4.43□□□□□ -1.7
PDPN-205ENST00000487038 FOXA3P55318 350 aaPredicted RBP4.43□□□□□ -1.7
PDPN-205ENST00000487038 FAM229BQ4G0N7 80 aa4.43□□□□□ -1.7
PDPN-205ENST00000487038 C9orf129Q5T035 196 aaKnown RBP4.43□□□□□ -1.7
PDPN-205ENST00000487038 LINC00337Q8N6G1 96 aa4.43□□□□□ -1.7
PDPN-205ENST00000487038 TIMM21Q9BVV7 248 aa4.43□□□□□ -1.7
PDPN-205ENST00000487038 MED9Q9NWA0 146 aa4.43□□□□□ -1.7
PDPN-205ENST00000487038 TRBV20OR9-2A0A075B6H5 130 aa4.42□□□□□ -1.7
PDPN-205ENST00000487038 IGKV2D-26A0A0A0MRZ7 120 aa4.42□□□□□ -1.7
PDPN-205ENST00000487038 IGHV3OR16-9A0A0B4J2B5 98 aa4.42□□□□□ -1.7
PDPN-205ENST00000487038 PPP1R2P9O14990 202 aa4.42□□□□□ -1.7
PDPN-205ENST00000487038 ASB16-AS1Q495Z4 193 aa4.42□□□□□ -1.7
PDPN-205ENST00000487038 C22orf24Q9Y442 160 aa4.42□□□□□ -1.7
PDPN-205ENST00000487038 IFITM10A6NMD0 228 aa4.41□□□□□ -1.7
PDPN-205ENST00000487038 A8MWL6 223 aa4.41□□□□□ -1.7
PDPN-205ENST00000487038 TCAPO15273 167 aa4.41□□□□□ -1.7
PDPN-205ENST00000487038 SEC61BP60468 96 aaKnown RBP4.41□□□□□ -1.7
PDPN-205ENST00000487038 SUMO2P61956 95 aaKnown RBP4.41□□□□□ -1.7
PDPN-205ENST00000487038 HBBP68871 147 aa4.41□□□□□ -1.7
PDPN-205ENST00000487038 ZNF345Q14585 488 aa4.41□□□□□ -1.7
PDPN-205ENST00000487038 KRTAP13-2Q52LG2 175 aa4.41□□□□□ -1.7
PDPN-205ENST00000487038 FP248Q71RG6 208 aaPredicted RBP4.41□□□□□ -1.7
PDPN-205ENST00000487038 TMEM191AQ9H0A3 160 aa4.41□□□□□ -1.7
PDPN-205ENST00000487038 TP73-AS1Q9UF72 201 aa4.41□□□□□ -1.7
PDPN-205ENST00000487038 KANTRA0A1W2PQU2 76 aa4.4□□□□□ -1.71
PDPN-205ENST00000487038 GATCO43716 136 aaKnown RBP4.4□□□□□ -1.71
PDPN-205ENST00000487038 UBE2AP49459 152 aa4.4□□□□□ -1.71
PDPN-205ENST00000487038 MRPL55Q7Z7F7 128 aaKnown RBP4.4□□□□□ -1.71
PDPN-205ENST00000487038 SPANXA1Q9NS26 97 aa4.4□□□□□ -1.71
PDPN-205ENST00000487038 A0A1B0GUT8 65 aa4.39□□□□□ -1.71
PDPN-205ENST00000487038 ZNF727A8MUV8 499 aa4.39□□□□□ -1.71
PDPN-205ENST00000487038 PRSS2P07478 247 aa4.39□□□□□ -1.71
PDPN-205ENST00000487038 CFC1BP0CG36 223 aa4.39□□□□□ -1.71
PDPN-205ENST00000487038 RAB4AP20338 218 aa4.39□□□□□ -1.71
PDPN-205ENST00000487038 CT83Q5H943 113 aa4.39□□□□□ -1.71
PDPN-205ENST00000487038 C2orf82Q6UX34 121 aa4.39□□□□□ -1.71
PDPN-205ENST00000487038 ANAPC11Q9NYG5 84 aa4.39□□□□□ -1.71
PDPN-205ENST00000487038 K7EN84 100 aa4.38□□□□□ -1.71
PDPN-205ENST00000487038 TAGLN2P37802 199 aaKnown RBP4.38□□□□□ -1.71
PDPN-205ENST00000487038 CKS1BP61024 79 aa4.38□□□□□ -1.71
PDPN-205ENST00000487038 MRPS36P82909 103 aaKnown RBP4.38□□□□□ -1.71
PDPN-205ENST00000487038 KIAA0087Q14695 138 aa4.38□□□□□ -1.71
PDPN-205ENST00000487038 LINC00242Q5T6M2 205 aa4.38□□□□□ -1.71
PDPN-205ENST00000487038 SPAG11AQ6PDA7 123 aa4.38□□□□□ -1.71
PDPN-205ENST00000487038 AMN1Q8IY45 258 aa4.38□□□□□ -1.71
PDPN-205ENST00000487038 LINC00469Q8N7U9 141 aa4.38□□□□□ -1.71
PDPN-205ENST00000487038 A0A1B0GVG6 124 aa4.37□□□□□ -1.71
PDPN-205ENST00000487038 HIGD1CA8MV81 97 aa4.37□□□□□ -1.71
PDPN-205ENST00000487038 IFI27P40305 119 aaPredicted RBP4.37□□□□□ -1.71
PDPN-205ENST00000487038 RPL39P62891 51 aaKnown RBP4.37□□□□□ -1.71
PDPN-205ENST00000487038 FAM231DQ6ZW35 169 aa4.37□□□□□ -1.71
PDPN-205ENST00000487038 OCC1Q8TAD7 63 aa4.37□□□□□ -1.71
PDPN-205ENST00000487038 XAGE1AQ9HD64 81 aa4.37□□□□□ -1.71
PDPN-205ENST00000487038 SMKR1H3BMG3 65 aa4.36□□□□□ -1.71
PDPN-205ENST00000487038 KRTAP13-3Q3SY46 172 aa4.36□□□□□ -1.71
PDPN-205ENST00000487038 C4orf48Q5BLP8 95 aa4.36□□□□□ -1.71
PDPN-205ENST00000487038 LINC01561Q8N1V8 128 aa4.36□□□□□ -1.71
PDPN-205ENST00000487038 NRACQ8N912 160 aa4.36□□□□□ -1.71
PDPN-205ENST00000487038 C20orf78Q9BR46 151 aa4.36□□□□□ -1.71
PDPN-205ENST00000487038 RPL37AP8A6NKH3 93 aa4.35□□□□□ -1.71
PDPN-205ENST00000487038 RIGQ13278 110 aa4.35□□□□□ -1.71
PDPN-205ENST00000487038 C6orf226Q5I0X4 101 aa4.35□□□□□ -1.71
PDPN-205ENST00000487038 Q6ZN92 141 aa4.35□□□□□ -1.71
PDPN-205ENST00000487038 Q8IZM0 81 aa4.35□□□□□ -1.71
PDPN-205ENST00000487038 LINC00167Q96N53 147 aa4.35□□□□□ -1.71
PDPN-205ENST00000487038 C2orf88Q9BSF0 95 aa4.35□□□□□ -1.71
PDPN-205ENST00000487038 TOMM7Q9P0U1 55 aa4.35□□□□□ -1.71
PDPN-205ENST00000487038 NDUFA12Q9UI09 145 aa4.35□□□□□ -1.71
PDPN-205ENST00000487038 LINC00862A6NCI5 91 aa4.34□□□□□ -1.71
PDPN-205ENST00000487038 HMSDA8MTL9 139 aa4.34□□□□□ -1.71
PDPN-205ENST00000487038 RPL32P62910 135 aaKnown RBP4.34□□□□□ -1.71
PDPN-205ENST00000487038 PNRC1Q12796 327 aaPredicted RBP4.34□□□□□ -1.71
PDPN-205ENST00000487038 TEX43Q6ZNM6 134 aa4.34□□□□□ -1.71
PDPN-205ENST00000487038 KRTAP13-1Q8IUC0 172 aa4.34□□□□□ -1.71
PDPN-205ENST00000487038 NKAPP1Q8N9T2 125 aa4.34□□□□□ -1.71
PDPN-205ENST00000487038 TRBV24-1A0A075B6N3 115 aa4.33□□□□□ -1.72
PDPN-205ENST00000487038 KRTAP9-7A8MTY7 169 aa4.33□□□□□ -1.72
PDPN-205ENST00000487038 F8VRH5 84 aa4.33□□□□□ -1.72
PDPN-205ENST00000487038 SMLR1H3BR10 107 aa4.33□□□□□ -1.72
PDPN-205ENST00000487038 CKS2P33552 79 aa4.33□□□□□ -1.72
PDPN-205ENST00000487038 CXCL5P42830 114 aa4.33□□□□□ -1.72
PDPN-205ENST00000487038 DAND5Q8N907 189 aa4.33□□□□□ -1.72
PDPN-205ENST00000487038 FAM104AQ969W3 186 aa4.33□□□□□ -1.72
PDPN-205ENST00000487038 TMEM141Q96I45 108 aa4.33□□□□□ -1.72
PDPN-205ENST00000487038 ALKBH7Q9BT30 221 aaPredicted RBP4.33□□□□□ -1.72
PDPN-205ENST00000487038 SMIM2Q9BVW6 85 aa4.33□□□□□ -1.72
PDPN-205ENST00000487038 KRTAP4-1Q9BYQ7 146 aa4.33□□□□□ -1.72
PDPN-205ENST00000487038 GAGE10A6NGK3 116 aa4.32□□□□□ -1.72
PDPN-205ENST00000487038 TMEM250H0YL14 139 aa4.32□□□□□ -1.72
PDPN-205ENST00000487038 TNFRSF6BO95407 300 aa4.32□□□□□ -1.72
PDPN-205ENST00000487038 MRPL51Q4U2R6 128 aaKnown RBP4.32□□□□□ -1.72
PDPN-205ENST00000487038 FAM19A1Q7Z5A9 133 aa4.32□□□□□ -1.72
PDPN-205ENST00000487038 FAM19A2Q8N3H0 131 aa4.32□□□□□ -1.72
PDPN-205ENST00000487038 PYGO1Q9Y3Y4 419 aa4.32□□□□□ -1.72
PDPN-205ENST00000487038 IGLV4-3A0A075B6K6 122 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms