RNA–Protein interactions for RNA: ENST00000484388.1

ABCA4-206, Transcript of ATP binding cassette subfamily A member 4, human

TSL 2

Gene ABCA4, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA4-206	ENST00000484388	NHP2	Q9NX24	153 aa	Known RBP	0.75	□□□□□ -2.29
ABCA4-206	ENST00000484388	BET1L	Q9NYM9	111 aa		0.75	□□□□□ -2.29
ABCA4-206	ENST00000484388	COMMD3	Q9UBI1	195 aa		0.75	□□□□□ -2.29
ABCA4-206	ENST00000484388	PAIP2B	Q9ULR5	123 aa	Known RBP	0.75	□□□□□ -2.29
ABCA4-206	ENST00000484388	EPDR1	Q9UM22	224 aa		0.75	□□□□□ -2.29
ABCA4-206	ENST00000484388	ZFP30	Q9Y2G7	519 aa		0.75	□□□□□ -2.29
ABCA4-206	ENST00000484388	LENEP	Q9Y5L5	61 aa		0.75	□□□□□ -2.29
ABCA4-206	ENST00000484388	LY96	Q9Y6Y9	160 aa		0.75	□□□□□ -2.29
ABCA4-206	ENST00000484388	DNAH17	Q9UFH2	4485 aa		0.75	□□□□□ -2.29
ABCA4-206	ENST00000484388	EXPH5	Q8NEV8	1989 aa		0.75	□□□□□ -2.29
ABCA4-206	ENST00000484388	HRNR	Q86YZ3	2850 aa	Predicted RBP	0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	TRBV19	A0A075B6N1	114 aa		0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	TRAV4	A0A0B4J268	109 aa		0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	IGKV1-9	A0A0C4DH69	117 aa		0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	LOC107986453	A0A1B0GWG9	222 aa		0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	KANTR	A0A1W2PQU2	76 aa		0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388		A0A1W2PRE2	83 aa		0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	ODAM	A1E959	279 aa		0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	TMEM218	A2RU14	115 aa		0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	RBAKDN	A6NC62	111 aa		0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	CRYM-AS1	A6NIL9	109 aa		0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	FAM223B	A6NKX1	122 aa		0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388		F2Z2F3	143 aa		0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	GEMIN2	O14893	280 aa	Known RBP	0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	CCL25	O15444	150 aa		0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	PITX3	O75364	302 aa		0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	LYZL6	O75951	148 aa		0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	OR2H2	O95918	312 aa		0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	PPY	P01298	95 aa		0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	IFNA1	P01562	189 aa		0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	CD3D	P04234	171 aa		0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	S100A8	P05109	93 aa		0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	SLC25A5	P05141	298 aa	Known RBP	0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	SMIM17	P0DL12	118 aa		0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	CRYGA	P11844	174 aa		0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	IL7	P13232	177 aa		0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	TPT1	P13693	172 aa	Known RBP	0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	FOXA3	P55318	350 aa	Predicted RBP	0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	PIGP	P57054	158 aa		0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	TCTA	P57738	103 aa		0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	RRAS2	P62070	204 aa	Predicted RBP	0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	PSG9	Q00887	426 aa		0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	PLGLA	Q15195	96 aa		0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	DEFB110	Q30KQ9	67 aa		0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	C10orf55	Q5SWW7	151 aa		0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388		Q6AWC8	147 aa		0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	OR2T2	Q6IF00	324 aa		0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	ZNF833P	Q6ZTB9	187 aa		0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	AKAP14	Q86UN6	197 aa		0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	FAM223A	Q8IWN6	122 aa		0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	PDZD9	Q8IXQ8	264 aa		0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	OR5AS1	Q8N127	324 aa		0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	C10orf111	Q8N326	155 aa		0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	WFDC9	Q8NEX5	89 aa		0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	OR8D4	Q8NGM9	314 aa		0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	OR10K1	Q8NGX5	313 aa		0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	TMEM167A	Q8TBQ9	72 aa		0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	NEK7	Q8TDX7	302 aa		0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	C10orf105	Q8TEF2	133 aa		0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	ZNF418	Q8TF45	676 aa	Predicted RBP	0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	TMEM203	Q969S6	136 aa		0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	ADAT3	Q96EY9	351 aa	Predicted RBP	0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	ARHGAP5-AS1	Q96IT6	56 aa		0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	AQP10	Q96PS8	301 aa		0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	CCL19	Q99731	98 aa		0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	WFDC6	Q9BQY6	131 aa		0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	PSMG3	Q9BT73	122 aa	Predicted RBP	0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	TAF9B	Q9HBM6	251 aa		0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	DYNLRB1	Q9NP97	96 aa		0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	NDUFA4L2	Q9NRX3	87 aa		0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	TMEM167B	Q9NRX6	74 aa		0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	TMEM14B	Q9NUH8	114 aa		0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	TAS2R4	Q9NYW5	299 aa		0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	MUC19	Q7Z5P9	8384 aa		0.74	□□□□□ -2.29
ABCA4-206	ENST00000484388	NUP210L	Q5VU65	1888 aa		0.73	□□□□□ -2.29
ABCA4-206	ENST00000484388	HEATR1	Q9H583	2144 aa	Known RBP	0.73	□□□□□ -2.29
ABCA4-206	ENST00000484388	SCN3A	Q9NY46	2000 aa		0.73	□□□□□ -2.29
ABCA4-206	ENST00000484388		A0A087WWC5	75 aa		0.73	□□□□□ -2.29
ABCA4-206	ENST00000484388	TRAV14DV4	A0A0A6YYC5	116 aa		0.73	□□□□□ -2.29
ABCA4-206	ENST00000484388	IGKV3D-7	A0A0C4DH55	119 aa		0.73	□□□□□ -2.29
ABCA4-206	ENST00000484388	IGKV3OR2-268	A0A0C4DH90	116 aa		0.73	□□□□□ -2.29
ABCA4-206	ENST00000484388	TRBV6-1	A0A0K0K1D8	114 aa		0.73	□□□□□ -2.29
ABCA4-206	ENST00000484388	C7orf71	A4D174	169 aa		0.73	□□□□□ -2.29
ABCA4-206	ENST00000484388	TMEM189	A5PLL7	270 aa		0.73	□□□□□ -2.29
ABCA4-206	ENST00000484388	DEFB108A	A8MXU0	73 aa		0.73	□□□□□ -2.29
ABCA4-206	ENST00000484388	C1orf196	B1AJZ1	125 aa		0.73	□□□□□ -2.29
ABCA4-206	ENST00000484388	LINC00587	B1AMM8	73 aa		0.73	□□□□□ -2.29
ABCA4-206	ENST00000484388	NDUFA4	O00483	81 aa		0.73	□□□□□ -2.29
ABCA4-206	ENST00000484388	HYPM	O75409	117 aa		0.73	□□□□□ -2.29
ABCA4-206	ENST00000484388	NDUFA3	O95167	84 aa		0.73	□□□□□ -2.29
ABCA4-206	ENST00000484388	MPC2	O95563	127 aa		0.73	□□□□□ -2.29
ABCA4-206	ENST00000484388	IFNA17	P01571	189 aa		0.73	□□□□□ -2.29
ABCA4-206	ENST00000484388	MT-ND4L	P03901	98 aa		0.73	□□□□□ -2.29
ABCA4-206	ENST00000484388	IFNA4	P05014	189 aa		0.73	□□□□□ -2.29
ABCA4-206	ENST00000484388	GYPB	P06028	91 aa		0.73	□□□□□ -2.29
ABCA4-206	ENST00000484388	OR10J4	P0C629	311 aa		0.73	□□□□□ -2.29
ABCA4-206	ENST00000484388	BAALC-AS2	P0C853	105 aa		0.73	□□□□□ -2.29
ABCA4-206	ENST00000484388	RNASE3	P12724	160 aa	Known RBP	0.73	□□□□□ -2.29
ABCA4-206	ENST00000484388	CCL3L1	P16619	93 aa		0.73	□□□□□ -2.29

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