RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 RPL13AP40429 203 aaKnown RBP10.59□□□□□ -0.71
ATG4B-220ENST00000482507 Q9H8V8 135 aa10.59□□□□□ -0.71
ATG4B-220ENST00000482507 RNF183Q96D59 192 aa10.58□□□□□ -0.72
ATG4B-220ENST00000482507 A0A0U1RRA0 63 aa10.58□□□□□ -0.72
ATG4B-220ENST00000482507 SMIM1B2RUZ4 78 aa10.58□□□□□ -0.72
ATG4B-220ENST00000482507 COL6A5A8TX70 2615 aa10.58□□□□□ -0.72
ATG4B-220ENST00000482507 TRAV13-1A0A0B4J241 112 aa10.57□□□□□ -0.72
ATG4B-220ENST00000482507 K7EQD1 137 aa10.57□□□□□ -0.72
ATG4B-220ENST00000482507 CCL24O00175 119 aa10.57□□□□□ -0.72
ATG4B-220ENST00000482507 GIG44P09565 113 aaPredicted RBP10.57□□□□□ -0.72
ATG4B-220ENST00000482507 TRAV25A0A0B4J276 109 aa10.57□□□□□ -0.72
ATG4B-220ENST00000482507 GAGE12JA6NER3 117 aa10.57□□□□□ -0.72
ATG4B-220ENST00000482507 IFITM1P13164 125 aa10.57□□□□□ -0.72
ATG4B-220ENST00000482507 GAGE4Q13068 117 aa10.57□□□□□ -0.72
ATG4B-220ENST00000482507 GAGE5Q13069 117 aa10.57□□□□□ -0.72
ATG4B-220ENST00000482507 KRTAP24-1Q3LI83 254 aa10.57□□□□□ -0.72
ATG4B-220ENST00000482507 STAB1Q9NY15 2570 aa10.57□□□□□ -0.72
ATG4B-220ENST00000482507 HERVK_113P63121 156 aa10.56□□□□□ -0.72
ATG4B-220ENST00000482507 SOSTDC1Q6X4U4 206 aa10.56□□□□□ -0.72
ATG4B-220ENST00000482507 LINC00308Q8TCZ7 52 aa10.56□□□□□ -0.72
ATG4B-220ENST00000482507 WFDC10AQ9H1F0 79 aa10.56□□□□□ -0.72
ATG4B-220ENST00000482507 TMEM262E9PQX1 116 aa10.56□□□□□ -0.72
ATG4B-220ENST00000482507 RPL36AP83881 106 aaKnown RBP10.56□□□□□ -0.72
ATG4B-220ENST00000482507 FAM19A3Q7Z5A8 133 aa10.56□□□□□ -0.72
ATG4B-220ENST00000482507 RPL36ALQ969Q0 106 aaKnown RBP10.56□□□□□ -0.72
ATG4B-220ENST00000482507 NOTCH3Q9UM47 2321 aa10.56□□□□□ -0.72
ATG4B-220ENST00000482507 LST1O00453 97 aa10.55□□□□□ -0.72
ATG4B-220ENST00000482507 C2orf82Q6UX34 121 aa10.55□□□□□ -0.72
ATG4B-220ENST00000482507 CITED1Q99966 193 aa10.55□□□□□ -0.72
ATG4B-220ENST00000482507 NOP10Q9NPE3 64 aaKnown RBP10.55□□□□□ -0.72
ATG4B-220ENST00000482507 F5H768 121 aa10.55□□□□□ -0.72
ATG4B-220ENST00000482507 CDC42SE2Q9NRR3 84 aa10.55□□□□□ -0.72
ATG4B-220ENST00000482507 TRAV4A0A0B4J268 109 aa10.54□□□□□ -0.72
ATG4B-220ENST00000482507 TRBV10-1A0A0K0K1A3 114 aa10.54□□□□□ -0.72
ATG4B-220ENST00000482507 PLAC8L1A1L4L8 177 aa10.54□□□□□ -0.72
ATG4B-220ENST00000482507 CSDC2Q9Y534 153 aaKnown RBP10.54□□□□□ -0.72
ATG4B-220ENST00000482507 LOC100131303A0A0U1RQF7 123 aa10.54□□□□□ -0.72
ATG4B-220ENST00000482507 COX6CP09669 75 aa10.54□□□□□ -0.72
ATG4B-220ENST00000482507 UBE2WQ96B02 151 aa10.54□□□□□ -0.72
ATG4B-220ENST00000482507 DAZ2Q13117 558 aaKnown RBP10.53□□□□□ -0.72
ATG4B-220ENST00000482507 DAZ4Q86SG3 579 aaKnown RBP10.53□□□□□ -0.72
ATG4B-220ENST00000482507 DAZ3Q9NR90 486 aaKnown RBP10.53□□□□□ -0.72
ATG4B-220ENST00000482507 CIRBPQ14011 172 aaKnown RBP10.52□□□□□ -0.73
ATG4B-220ENST00000482507 H3BT86 120 aa10.51□□□□□ -0.73
ATG4B-220ENST00000482507 SPATA3Q8NHX4 192 aa10.5□□□□□ -0.73
ATG4B-220ENST00000482507 TRAV26-1A0A087WT03 109 aa10.5□□□□□ -0.73
ATG4B-220ENST00000482507 TRAV8-4A0A0B4J246 113 aa10.5□□□□□ -0.73
ATG4B-220ENST00000482507 GAGE7O76087 117 aa10.5□□□□□ -0.73
ATG4B-220ENST00000482507 GAGE12FP0CL80 117 aa10.5□□□□□ -0.73
ATG4B-220ENST00000482507 GAGE12GP0CL81 117 aa10.5□□□□□ -0.73
ATG4B-220ENST00000482507 GAGE12IP0CL82 117 aa10.5□□□□□ -0.73
ATG4B-220ENST00000482507 RPL35AP18077 110 aaKnown RBP10.49□□□□□ -0.73
ATG4B-220ENST00000482507 C19orf73Q9NVV2 129 aa10.49□□□□□ -0.73
ATG4B-220ENST00000482507 MEIG1Q5JSS6 88 aa10.48□□□□□ -0.73
ATG4B-220ENST00000482507 TMEM243Q9BU79 118 aa10.48□□□□□ -0.73
ATG4B-220ENST00000482507 SHISA2Q6UWI4 295 aa10.47□□□□□ -0.73
ATG4B-220ENST00000482507 TRGV2A0A075B6R0 118 aa10.47□□□□□ -0.73
ATG4B-220ENST00000482507 CSNK1G2-AS1Q8NCQ2 148 aa10.47□□□□□ -0.73
ATG4B-220ENST00000482507 PF4P02776 101 aa10.46□□□□□ -0.74
ATG4B-220ENST00000482507 C16orf74Q96GX8 76 aa10.46□□□□□ -0.74
ATG4B-220ENST00000482507 COX7A2LO14548 114 aa10.45□□□□□ -0.74
ATG4B-220ENST00000482507 UBE2L6O14933 153 aa10.45□□□□□ -0.74
ATG4B-220ENST00000482507 SNCGO76070 127 aa10.45□□□□□ -0.74
ATG4B-220ENST00000482507 NHLRC4P0CG21 123 aaPredicted RBP10.45□□□□□ -0.74
ATG4B-220ENST00000482507 DEFB121Q5J5C9 76 aa10.45□□□□□ -0.74
ATG4B-220ENST00000482507 C15orf53Q8NAA6 179 aa10.45□□□□□ -0.74
ATG4B-220ENST00000482507 GAGE6Q13070 117 aa10.45□□□□□ -0.74
ATG4B-220ENST00000482507 IGLV4-60A0A075B6I1 120 aa10.44□□□□□ -0.74
ATG4B-220ENST00000482507 IGLV1-51P01701 117 aa10.44□□□□□ -0.74
ATG4B-220ENST00000482507 IGKV3OR2-268A0A0C4DH90 116 aa10.44□□□□□ -0.74
ATG4B-220ENST00000482507 ANAPC13Q9BS18 74 aa10.44□□□□□ -0.74
ATG4B-220ENST00000482507 HERV-K104P63124 156 aa10.43□□□□□ -0.74
ATG4B-220ENST00000482507 GAGE2BQ13066 116 aa10.43□□□□□ -0.74
ATG4B-220ENST00000482507 GAGE2EQ4V326 116 aa10.43□□□□□ -0.74
ATG4B-220ENST00000482507 TTC32Q5I0X7 151 aa10.43□□□□□ -0.74
ATG4B-220ENST00000482507 C3orf56Q8N813 242 aa10.43□□□□□ -0.74
ATG4B-220ENST00000482507 FAM218AQ96MZ4 157 aa10.43□□□□□ -0.74
ATG4B-220ENST00000482507 OVOL2Q9BRP0 275 aa10.43□□□□□ -0.74
ATG4B-220ENST00000482507 GAGE2DQ9UEU5 116 aa10.43□□□□□ -0.74
ATG4B-220ENST00000482507 PKD1L1Q8TDX9 2849 aa10.43□□□□□ -0.74
ATG4B-220ENST00000482507 TRBV6-4A0A1B0GX49 114 aa10.43□□□□□ -0.74
ATG4B-220ENST00000482507 TRGV4A0A0C4DH28 118 aa10.42□□□□□ -0.74
ATG4B-220ENST00000482507 FHL2Q14192 279 aa10.42□□□□□ -0.74
ATG4B-220ENST00000482507 LINC00482Q8N8I6 264 aa10.42□□□□□ -0.74
ATG4B-220ENST00000482507 COX7B2Q8TF08 81 aa10.41□□□□□ -0.74
ATG4B-220ENST00000482507 C22orf24Q9Y442 160 aa10.41□□□□□ -0.74
ATG4B-220ENST00000482507 NDUFV3P56181 108 aaKnown RBP10.4□□□□□ -0.74
ATG4B-220ENST00000482507 MIR7-3HGQ8N6C7 128 aa10.4□□□□□ -0.74
ATG4B-220ENST00000482507 COPS9Q8WXC6 57 aa10.4□□□□□ -0.74
ATG4B-220ENST00000482507 TOMM7Q9P0U1 55 aa10.4□□□□□ -0.74
ATG4B-220ENST00000482507 IGKV2-28A0A075B6P5 120 aa10.39□□□□□ -0.75
ATG4B-220ENST00000482507 TRBV6-8A0A0A6YYG3 113 aa10.39□□□□□ -0.75
ATG4B-220ENST00000482507 IGKV2D-28P01615 120 aa10.39□□□□□ -0.75
ATG4B-220ENST00000482507 LINC00337Q8N6G1 96 aa10.39□□□□□ -0.75
ATG4B-220ENST00000482507 FAM240AA0A1B0GVK7 77 aa10.39□□□□□ -0.75
ATG4B-220ENST00000482507 CMC4P56277 68 aaPredicted RBP10.39□□□□□ -0.75
ATG4B-220ENST00000482507 FAM110AQ9BQ89 295 aa10.39□□□□□ -0.75
ATG4B-220ENST00000482507 IGHV3OR16-9A0A0B4J2B5 98 aa10.38□□□□□ -0.75
ATG4B-220ENST00000482507 MDFIQ99750 246 aa10.38□□□□□ -0.75
ATG4B-220ENST00000482507 Q6Q795 121 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms