RNA–Protein interactions for RNA: ENST00000473835.6

U2SURP-208, Transcript of U2 snRNP associated SURP domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene U2SURP, Length 7,276 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2SURP-208ENST00000473835 HTN1P15515 57 aa3.29□□□□□ -1.88
U2SURP-208ENST00000473835 CUBNO60494 3623 aa3.29□□□□□ -1.88
U2SURP-208ENST00000473835 FAM19A1Q7Z5A9 133 aa3.29□□□□□ -1.88
U2SURP-208ENST00000473835 CACNA1BQ00975 2339 aa3.29□□□□□ -1.88
U2SURP-208ENST00000473835 CRPP02741 224 aa3.29□□□□□ -1.88
U2SURP-208ENST00000473835 IGHV4-61A0A0C4DH41 118 aa3.29□□□□□ -1.88
U2SURP-208ENST00000473835 FP248Q71RG6 208 aaPredicted RBP3.29□□□□□ -1.88
U2SURP-208ENST00000473835 OVOL2Q9BRP0 275 aa3.29□□□□□ -1.88
U2SURP-208ENST00000473835 PCNX1Q96RV3 2341 aa3.29□□□□□ -1.88
U2SURP-208ENST00000473835 H0YGX0 51 aa3.28□□□□□ -1.88
U2SURP-208ENST00000473835 LINC00336Q6ZUF6 198 aa3.28□□□□□ -1.88
U2SURP-208ENST00000473835 COX7B2Q8TF08 81 aa3.28□□□□□ -1.88
U2SURP-208ENST00000473835 PKD1L2Q7Z442 2459 aa3.28□□□□□ -1.88
U2SURP-208ENST00000473835 XCL1P47992 114 aa3.28□□□□□ -1.88
U2SURP-208ENST00000473835 XCL2Q9UBD3 114 aa3.28□□□□□ -1.88
U2SURP-208ENST00000473835 NDUFC2O95298 119 aa3.28□□□□□ -1.88
U2SURP-208ENST00000473835 IGHV3OR16-9A0A0B4J2B5 98 aa3.28□□□□□ -1.89
U2SURP-208ENST00000473835 M0R2N4 97 aa3.28□□□□□ -1.89
U2SURP-208ENST00000473835 GHRHP01286 108 aa3.28□□□□□ -1.89
U2SURP-208ENST00000473835 TRBV10-3A0A0K0K1G6 114 aa3.27□□□□□ -1.89
U2SURP-208ENST00000473835 TRBV6-4A0A1B0GX49 114 aa3.27□□□□□ -1.89
U2SURP-208ENST00000473835 DEFB131AP59861 70 aa3.27□□□□□ -1.89
U2SURP-208ENST00000473835 Q8NDZ9 215 aa3.27□□□□□ -1.89
U2SURP-208ENST00000473835 ENHOQ6UWT2 76 aa3.27□□□□□ -1.89
U2SURP-208ENST00000473835 C18orf65Q6ZTR6 163 aa3.27□□□□□ -1.89
U2SURP-208ENST00000473835 TRAV23DV6A0A075B6W5 121 aa3.27□□□□□ -1.89
U2SURP-208ENST00000473835 K7EQD1 137 aa3.27□□□□□ -1.89
U2SURP-208ENST00000473835 ATP5EP2Q5VTU8 51 aa3.27□□□□□ -1.89
U2SURP-208ENST00000473835 C1orf158Q8N1D5 194 aa3.27□□□□□ -1.89
U2SURP-208ENST00000473835 SPATA3Q8NHX4 192 aa3.27□□□□□ -1.89
U2SURP-208ENST00000473835 MRAPQ8TCY5 172 aa3.27□□□□□ -1.89
U2SURP-208ENST00000473835 ACACAQ13085 2346 aa3.27□□□□□ -1.89
U2SURP-208ENST00000473835 TPRP12270 2363 aaKnown RBP3.27□□□□□ -1.89
U2SURP-208ENST00000473835 PLAC8L1A1L4L8 177 aa3.27□□□□□ -1.89
U2SURP-208ENST00000473835 C19orf84I3L1E1 186 aa3.27□□□□□ -1.89
U2SURP-208ENST00000473835 RPL36AP83881 106 aaKnown RBP3.27□□□□□ -1.89
U2SURP-208ENST00000473835 KLKP1Q107X0 134 aa3.27□□□□□ -1.89
U2SURP-208ENST00000473835 RPL36ALQ969Q0 106 aaKnown RBP3.27□□□□□ -1.89
U2SURP-208ENST00000473835 MAP6D1Q9H9H5 199 aa3.27□□□□□ -1.89
U2SURP-208ENST00000473835 ORMDL1Q9P0S3 153 aa3.27□□□□□ -1.89
U2SURP-208ENST00000473835 PFN2P35080 140 aa3.26□□□□□ -1.89
U2SURP-208ENST00000473835 IGLV4-60A0A075B6I1 120 aa3.26□□□□□ -1.89
U2SURP-208ENST00000473835 IBA57-AS1B1ANH7 110 aa3.26□□□□□ -1.89
U2SURP-208ENST00000473835 Q8N814 137 aa3.26□□□□□ -1.89
U2SURP-208ENST00000473835 DGAT2L7PQ6IED9 249 aa3.26□□□□□ -1.89
U2SURP-208ENST00000473835 Q6ZTI0 123 aa3.26□□□□□ -1.89
U2SURP-208ENST00000473835 IGHV4-59P01825 116 aa3.26□□□□□ -1.89
U2SURP-208ENST00000473835 LINC00482Q8N8I6 264 aa3.26□□□□□ -1.89
U2SURP-208ENST00000473835 SPTBN1Q01082 2364 aaKnown RBP3.26□□□□□ -1.89
U2SURP-208ENST00000473835 FAM236DA0A1B0GTK5 79 aa3.26□□□□□ -1.89
U2SURP-208ENST00000473835 FAM236CP0DP71 79 aa3.26□□□□□ -1.89
U2SURP-208ENST00000473835 C20orf197Q8N268 126 aa3.26□□□□□ -1.89
U2SURP-208ENST00000473835 CFAP46Q8IYW2 2715 aa3.26□□□□□ -1.89
U2SURP-208ENST00000473835 ITPR1Q14643 2758 aa3.26□□□□□ -1.89
U2SURP-208ENST00000473835 TRAV10A0A0B4J240 114 aa3.25□□□□□ -1.89
U2SURP-208ENST00000473835 TRBV10-1A0A0K0K1A3 114 aa3.25□□□□□ -1.89
U2SURP-208ENST00000473835 FSHBP01225 129 aa3.25□□□□□ -1.89
U2SURP-208ENST00000473835 TMEM243Q9BU79 118 aa3.25□□□□□ -1.89
U2SURP-208ENST00000473835 PRO0628Q9UI54 55 aa3.25□□□□□ -1.89
U2SURP-208ENST00000473835 SLURP1P55000 103 aa3.25□□□□□ -1.89
U2SURP-208ENST00000473835 DSCR9P59020 149 aa3.25□□□□□ -1.89
U2SURP-208ENST00000473835 SERP1Q9Y6X1 66 aa3.25□□□□□ -1.89
U2SURP-208ENST00000473835 A0A087WZ39 114 aa3.25□□□□□ -1.89
U2SURP-208ENST00000473835 LOC100131303A0A0U1RQF7 123 aa3.25□□□□□ -1.89
U2SURP-208ENST00000473835 Q6ZQT0 140 aa3.25□□□□□ -1.89
U2SURP-208ENST00000473835 PRR3P79522 188 aaKnown RBP3.25□□□□□ -1.89
U2SURP-208ENST00000473835 ANK3Q12955 4377 aaKnown RBP3.25□□□□□ -1.89
U2SURP-208ENST00000473835 DEFB136Q30KP8 78 aa3.25□□□□□ -1.89
U2SURP-208ENST00000473835 ZNF702PQ9H963 129 aa3.25□□□□□ -1.89
U2SURP-208ENST00000473835 MXRA5Q9NR99 2828 aa3.24□□□□□ -1.89
U2SURP-208ENST00000473835 GIG44P09565 113 aaPredicted RBP3.24□□□□□ -1.89
U2SURP-208ENST00000473835 UBE2E2Q96LR5 201 aa3.24□□□□□ -1.89
U2SURP-208ENST00000473835 BCE1O60756 84 aa3.24□□□□□ -1.89
U2SURP-208ENST00000473835 NIPBLQ6KC79 2804 aaeCLIP3.24□□□□□ -1.89
U2SURP-208ENST00000473835 LINC00158P58513 81 aa3.24□□□□□ -1.89
U2SURP-208ENST00000473835 ODF3L2Q3SX64 289 aa3.24□□□□□ -1.89
U2SURP-208ENST00000473835 LOC110117498A0A087WWA1 95 aa3.24□□□□□ -1.89
U2SURP-208ENST00000473835 JMJD7-PLA2G4BH0Y9G9 81 aa3.24□□□□□ -1.89
U2SURP-208ENST00000473835 INSP01308 110 aa3.24□□□□□ -1.89
U2SURP-208ENST00000473835 DEFB112Q30KQ8 113 aa3.24□□□□□ -1.89
U2SURP-208ENST00000473835 IGHV4-30-2A0A087WSY4 118 aa3.24□□□□□ -1.89
U2SURP-208ENST00000473835 TRBV7-4A0A0J9YYF1 115 aa3.24□□□□□ -1.89
U2SURP-208ENST00000473835 RMI2Q96E14 147 aa3.24□□□□□ -1.89
U2SURP-208ENST00000473835 LINC01547P58512 204 aaPredicted RBP3.24□□□□□ -1.89
U2SURP-208ENST00000473835 TMEM86BQ8N661 226 aa3.24□□□□□ -1.89
U2SURP-208ENST00000473835 MAP1AP78559 2803 aaPredicted RBP3.23□□□□□ -1.89
U2SURP-208ENST00000473835 TRAV7A0A075B6U4 112 aa3.23□□□□□ -1.89
U2SURP-208ENST00000473835 PAX4O43316 350 aa3.23□□□□□ -1.89
U2SURP-208ENST00000473835 TRGV1A0A0A0MS02 117 aa3.23□□□□□ -1.89
U2SURP-208ENST00000473835 LINC00474Q9P2X8 69 aa3.23□□□□□ -1.89
U2SURP-208ENST00000473835 MSMBP08118 114 aa3.23□□□□□ -1.89
U2SURP-208ENST00000473835 J3QLI3 93 aa3.23□□□□□ -1.89
U2SURP-208ENST00000473835 S100A7L2Q5SY68 101 aa3.23□□□□□ -1.89
U2SURP-208ENST00000473835 FBN2P35556 2912 aa3.23□□□□□ -1.89
U2SURP-208ENST00000473835 KIAA0087Q14695 138 aa3.22□□□□□ -1.89
U2SURP-208ENST00000473835 TOMM7Q9P0U1 55 aa3.22□□□□□ -1.89
U2SURP-208ENST00000473835 ZNF469Q96JG9 3925 aaPredicted RBP3.22□□□□□ -1.89
U2SURP-208ENST00000473835 A0A1W2PRX2 142 aa3.22□□□□□ -1.89
U2SURP-208ENST00000473835 TMEM256-PLSCR3K7ERE1 68 aa3.22□□□□□ -1.89
U2SURP-208ENST00000473835 DEFB114Q30KQ6 69 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 171 ms