RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 MINOS1-NBL1R4GNA1 71 aa3.82□□□□□ -1.8
RTF1-203ENST00000473214 ZANQ9Y493 2812 aa3.82□□□□□ -1.8
RTF1-203ENST00000473214 DOCK10Q96BY6 2186 aa3.82□□□□□ -1.8
RTF1-203ENST00000473214 SPTBP11277 2137 aa3.82□□□□□ -1.8
RTF1-203ENST00000473214 NAP1L6A6NFF2 107 aa3.81□□□□□ -1.8
RTF1-203ENST00000473214 HMSDA8MTL9 139 aa3.81□□□□□ -1.8
RTF1-203ENST00000473214 IL4P05112 153 aa3.81□□□□□ -1.8
RTF1-203ENST00000473214 Q1T7F1 81 aa3.81□□□□□ -1.8
RTF1-203ENST00000473214 SERP2Q8N6R1 65 aa3.81□□□□□ -1.8
RTF1-203ENST00000473214 MRPL35Q9NZE8 188 aaKnown RBP3.81□□□□□ -1.8
RTF1-203ENST00000473214 TLN2Q9Y4G6 2542 aa3.81□□□□□ -1.8
RTF1-203ENST00000473214 IGKV1D-17A0A075B6S4 117 aa3.8□□□□□ -1.8
RTF1-203ENST00000473214 TFF3Q07654 80 aa3.8□□□□□ -1.8
RTF1-203ENST00000473214 ZNF816Q0VGE8 651 aaPredicted RBP3.8□□□□□ -1.8
RTF1-203ENST00000473214 SPATA45Q537H7 98 aa3.8□□□□□ -1.8
RTF1-203ENST00000473214 ARPINQ7Z6K5 226 aa3.8□□□□□ -1.8
RTF1-203ENST00000473214 MYOZ3Q8TDC0 251 aa3.8□□□□□ -1.8
RTF1-203ENST00000473214 LINC00474Q9P2X8 69 aa3.8□□□□□ -1.8
RTF1-203ENST00000473214 TRAV17A0A0B4J275 112 aa3.79□□□□□ -1.8
RTF1-203ENST00000473214 CRYM-AS1A6NIL9 109 aa3.79□□□□□ -1.8
RTF1-203ENST00000473214 PRB4P10163 310 aaPredicted RBP3.79□□□□□ -1.8
RTF1-203ENST00000473214 WFDC2Q14508 124 aa3.79□□□□□ -1.8
RTF1-203ENST00000473214 NMSQ5H8A3 153 aa3.79□□□□□ -1.8
RTF1-203ENST00000473214 SPANXN5Q5MJ07 72 aa3.79□□□□□ -1.8
RTF1-203ENST00000473214 TRGV9Q99603 122 aa3.79□□□□□ -1.8
RTF1-203ENST00000473214 NXT2Q9NPJ8 142 aaKnown RBP3.79□□□□□ -1.8
RTF1-203ENST00000473214 NDUFB11Q9NX14 153 aa3.79□□□□□ -1.8
RTF1-203ENST00000473214 ARID1AO14497 2285 aa3.79□□□□□ -1.8
RTF1-203ENST00000473214 INTS1Q8N201 2190 aaKnown RBP3.79□□□□□ -1.8
RTF1-203ENST00000473214 CNTRLQ7Z7A1 2325 aa3.78□□□□□ -1.8
RTF1-203ENST00000473214 TGP01266 2768 aa3.78□□□□□ -1.8
RTF1-203ENST00000473214 SONP18583 2426 aaKnown RBP3.78□□□□□ -1.8
RTF1-203ENST00000473214 WISP3O95389 354 aaPredicted RBP3.78□□□□□ -1.8
RTF1-203ENST00000473214 DSCR4P56555 118 aaPredicted RBP3.78□□□□□ -1.8
RTF1-203ENST00000473214 SNRPFP62306 86 aaKnown RBP3.78□□□□□ -1.8
RTF1-203ENST00000473214 Q6ZR54 194 aa3.78□□□□□ -1.8
RTF1-203ENST00000473214 SPTSSBQ8NFR3 76 aa3.78□□□□□ -1.8
RTF1-203ENST00000473214 OR8B2Q96RD0 313 aa3.78□□□□□ -1.8
RTF1-203ENST00000473214 SVEP1Q4LDE5 3571 aa3.78□□□□□ -1.8
RTF1-203ENST00000473214 GTF3C1Q12789 2109 aa3.77□□□□□ -1.81
RTF1-203ENST00000473214 TRAV2A0A0B4J234 112 aa3.77□□□□□ -1.81
RTF1-203ENST00000473214 E7EUB6 86 aa3.77□□□□□ -1.81
RTF1-203ENST00000473214 SYS1-DBNDD2H3BUS1 97 aa3.77□□□□□ -1.81
RTF1-203ENST00000473214 H3BUT2 72 aa3.77□□□□□ -1.81
RTF1-203ENST00000473214 BAALC-AS2P0C853 105 aa3.77□□□□□ -1.81
RTF1-203ENST00000473214 KRTAP24-1Q3LI83 254 aa3.77□□□□□ -1.81
RTF1-203ENST00000473214 KRTAP5-4Q6L8H1 288 aa3.77□□□□□ -1.81
RTF1-203ENST00000473214 SLC48A1Q6P1K1 146 aa3.77□□□□□ -1.81
RTF1-203ENST00000473214 SH2D6Q7Z4S9 175 aa3.77□□□□□ -1.81
RTF1-203ENST00000473214 LYPD6Q86Y78 171 aa3.77□□□□□ -1.81
RTF1-203ENST00000473214 Q8NAQ8 132 aa3.77□□□□□ -1.81
RTF1-203ENST00000473214 ST20-AS1Q8NBB2 130 aa3.77□□□□□ -1.81
RTF1-203ENST00000473214 CMTM2Q8TAZ6 248 aa3.77□□□□□ -1.81
RTF1-203ENST00000473214 UBALD1Q8TB05 177 aa3.77□□□□□ -1.81
RTF1-203ENST00000473214 TMEM254Q8TBM7 123 aa3.77□□□□□ -1.81
RTF1-203ENST00000473214 C20orf166-AS1Q96NR2 134 aa3.77□□□□□ -1.81
RTF1-203ENST00000473214 KANTRA0A1W2PQU2 76 aa3.76□□□□□ -1.81
RTF1-203ENST00000473214 NDUFC1O43677 76 aa3.76□□□□□ -1.81
RTF1-203ENST00000473214 C9orf116Q5BN46 136 aaPredicted RBP3.76□□□□□ -1.81
RTF1-203ENST00000473214 ZNF826PQ6ZT77 177 aa3.76□□□□□ -1.81
RTF1-203ENST00000473214 OR8B3Q8NGG8 313 aa3.76□□□□□ -1.81
RTF1-203ENST00000473214 COX14Q96I36 57 aa3.76□□□□□ -1.81
RTF1-203ENST00000473214 HIVEP2P31629 2446 aa3.76□□□□□ -1.81
RTF1-203ENST00000473214 CPAMD8Q8IZJ3 1885 aa3.75□□□□□ -1.81
RTF1-203ENST00000473214 IGHV3-64A0A075B6Q5 118 aa3.75□□□□□ -1.81
RTF1-203ENST00000473214 MUC21A0A140T8X8 626 aa3.75□□□□□ -1.81
RTF1-203ENST00000473214 A0A1B0GU33 70 aa3.75□□□□□ -1.81
RTF1-203ENST00000473214 C16orf90A8MZG2 172 aa3.75□□□□□ -1.81
RTF1-203ENST00000473214 ZNF861PO60384 105 aa3.75□□□□□ -1.81
RTF1-203ENST00000473214 KRTAP5-9P26371 169 aa3.75□□□□□ -1.81
RTF1-203ENST00000473214 EIF4EBP1Q13541 118 aaPredicted RBP3.75□□□□□ -1.81
RTF1-203ENST00000473214 MPV17LQ2QL34 196 aa3.75□□□□□ -1.81
RTF1-203ENST00000473214 DEFB113Q30KQ7 82 aa3.75□□□□□ -1.81
RTF1-203ENST00000473214 DEFB110Q30KQ9 67 aa3.75□□□□□ -1.81
RTF1-203ENST00000473214 KLF14Q8TD94 323 aaPredicted RBP3.75□□□□□ -1.81
RTF1-203ENST00000473214 KRTAP4-4Q9BYR3 166 aa3.75□□□□□ -1.81
RTF1-203ENST00000473214 RPS10P5Q9NQ39 176 aa3.75□□□□□ -1.81
RTF1-203ENST00000473214 IGLV10-54A0A075B6I4 117 aa3.74□□□□□ -1.81
RTF1-203ENST00000473214 TRAV13-2A0A0B4J235 113 aa3.74□□□□□ -1.81
RTF1-203ENST00000473214 SEC16AO15027 2179 aa3.74□□□□□ -1.81
RTF1-203ENST00000473214 MIR22HGQ0VDD5 57 aa3.74□□□□□ -1.81
RTF1-203ENST00000473214 ZCCHC23Q6ZST2 131 aa3.74□□□□□ -1.81
RTF1-203ENST00000473214 HEATR5AQ86XA9 2040 aa3.74□□□□□ -1.81
RTF1-203ENST00000473214 MAPK1IP1LQ8NDC0 245 aa3.74□□□□□ -1.81
RTF1-203ENST00000473214 NBEAL2Q6ZNJ1 2754 aa3.74□□□□□ -1.81
RTF1-203ENST00000473214 PKD1L1Q8TDX9 2849 aa3.73□□□□□ -1.81
RTF1-203ENST00000473214 RYR3Q15413 4870 aa3.73□□□□□ -1.81
RTF1-203ENST00000473214 A0A087WSZ3 146 aa3.73□□□□□ -1.81
RTF1-203ENST00000473214 TRAV10A0A0B4J240 114 aa3.73□□□□□ -1.81
RTF1-203ENST00000473214 TRBV10-3A0A0K0K1G6 114 aa3.73□□□□□ -1.81
RTF1-203ENST00000473214 ERC2-IT1O76042 136 aa3.73□□□□□ -1.81
RTF1-203ENST00000473214 C18orf32Q8TCD1 76 aa3.73□□□□□ -1.81
RTF1-203ENST00000473214 SMAD5-AS1Q9Y6J3 95 aa3.73□□□□□ -1.81
RTF1-203ENST00000473214 A0A087WXM4 84 aa3.72□□□□□ -1.81
RTF1-203ENST00000473214 A0A0J9YX75 114 aa3.72□□□□□ -1.81
RTF1-203ENST00000473214 CXorf51AA0A1B0GTR3 108 aa3.72□□□□□ -1.81
RTF1-203ENST00000473214 TCRBV4S1A1TA0A5B7 111 aa3.72□□□□□ -1.81
RTF1-203ENST00000473214 HCG22E2RYF7 251 aa3.72□□□□□ -1.81
RTF1-203ENST00000473214 PMCHL1Q16048 86 aa3.72□□□□□ -1.81
RTF1-203ENST00000473214 KRTAP25-1Q3LHN0 102 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms