RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 HIST1H2BHQ93079 126 aa13.08□□□□□ -0.32
SF1-213ENST00000472725 HIST1H2BNQ99877 126 aa13.08□□□□□ -0.32
SF1-213ENST00000472725 HIST1H2BMQ99879 126 aa13.08□□□□□ -0.32
SF1-213ENST00000472725 GVQW2A0A096LPI5 108 aaPredicted RBP13.07□□□□□ -0.32
SF1-213ENST00000472725 APOMO95445 188 aa13.07□□□□□ -0.32
SF1-213ENST00000472725 PRSS1P07477 247 aa13.07□□□□□ -0.32
SF1-213ENST00000472725 MALP21145 153 aa13.07□□□□□ -0.32
SF1-213ENST00000472725 LINC01561Q8N1V8 128 aa13.07□□□□□ -0.32
SF1-213ENST00000472725 C15orf56Q8N910 161 aa13.07□□□□□ -0.32
SF1-213ENST00000472725 CST9LQ9H4G1 147 aa13.07□□□□□ -0.32
SF1-213ENST00000472725 hDV102S1A0JD36 115 aa13.06□□□□□ -0.32
SF1-213ENST00000472725 HERVK_113P63121 156 aa13.06□□□□□ -0.32
SF1-213ENST00000472725 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.05□□□□□ -0.32
SF1-213ENST00000472725 LINC00310P59036 64 aa13.05□□□□□ -0.32
SF1-213ENST00000472725 PKD1P98161 4303 aa13.05□□□□□ -0.32
SF1-213ENST00000472725 A0A087WZ39 114 aa13.04□□□□□ -0.32
SF1-213ENST00000472725 GCSHP23434 173 aa13.04□□□□□ -0.32
SF1-213ENST00000472725 CNBPP62633 177 aaKnown RBP13.04□□□□□ -0.32
SF1-213ENST00000472725 ZC2HC1BQ5TFG8 222 aa13.04□□□□□ -0.32
SF1-213ENST00000472725 C5orf38Q86SI9 138 aa13.04□□□□□ -0.32
SF1-213ENST00000472725 HECTD4Q9Y4D8 3996 aa13.04□□□□□ -0.32
SF1-213ENST00000472725 TINCRA0A1B0GVN0 87 aa13.03□□□□□ -0.32
SF1-213ENST00000472725 GEMIN7Q9H840 131 aaKnown RBP13.03□□□□□ -0.32
SF1-213ENST00000472725 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.02□□□□□ -0.33
SF1-213ENST00000472725 FAM19A2Q8N3H0 131 aa13.02□□□□□ -0.33
SF1-213ENST00000472725 OR10D4PQ8NGN7 298 aa13.02□□□□□ -0.33
SF1-213ENST00000472725 IFI27L1Q96BM0 104 aa13.02□□□□□ -0.33
SF1-213ENST00000472725 ZNF561-AS1K7EIQ3 104 aa13.01□□□□□ -0.33
SF1-213ENST00000472725 COX6A2Q02221 97 aa13.01□□□□□ -0.33
SF1-213ENST00000472725 COA6Q5JTJ3 125 aaKnown RBP13.01□□□□□ -0.33
SF1-213ENST00000472725 IGHV3-64A0A075B6Q5 118 aa13□□□□□ -0.33
SF1-213ENST00000472725 F8WDY8 70 aa13□□□□□ -0.33
SF1-213ENST00000472725 LEPROTL1O95214 131 aa13□□□□□ -0.33
SF1-213ENST00000472725 C9orf163Q8N9P6 203 aa13□□□□□ -0.33
SF1-213ENST00000472725 TRAV12-1A0A0B4J245 112 aa12.99□□□□□ -0.33
SF1-213ENST00000472725 A0A0J9YXV3 536 aa12.99□□□□□ -0.33
SF1-213ENST00000472725 NUPR1O60356 82 aa12.99□□□□□ -0.33
SF1-213ENST00000472725 HIGD2BQ4VC39 106 aa12.99□□□□□ -0.33
SF1-213ENST00000472725 PACRGQ96M98 296 aaPredicted RBP12.99□□□□□ -0.33
SF1-213ENST00000472725 HSPB8Q9UJY1 196 aa12.99□□□□□ -0.33
SF1-213ENST00000472725 IGLV5-45A0A087WSX0 123 aa12.98□□□□□ -0.33
SF1-213ENST00000472725 IGLC3P0DOY3 106 aa12.98□□□□□ -0.33
SF1-213ENST00000472725 FUSP35637 526 aaKnown RBP eCLIP12.98□□□□□ -0.33
SF1-213ENST00000472725 NDUFA6P56556 154 aa12.98□□□□□ -0.33
SF1-213ENST00000472725 C2orf48Q96LS8 159 aa12.98□□□□□ -0.33
SF1-213ENST00000472725 ORAOV1Q8WV07 137 aa12.96□□□□□ -0.33
SF1-213ENST00000472725 CDKN2A-AS1Q9UH64 79 aa12.96□□□□□ -0.33
SF1-213ENST00000472725 EPPK1P58107 5090 aaKnown RBP12.95□□□□□ -0.34
SF1-213ENST00000472725 DNAH11Q96DT5 4516 aa12.95□□□□□ -0.34
SF1-213ENST00000472725 SLPIP03973 132 aa12.95□□□□□ -0.34
SF1-213ENST00000472725 SPAG11BQ08648 103 aa12.95□□□□□ -0.34
SF1-213ENST00000472725 LINC00469Q8N7U9 141 aa12.95□□□□□ -0.34
SF1-213ENST00000472725 PKIGQ9Y2B9 76 aa12.95□□□□□ -0.34
SF1-213ENST00000472725 IGLV4-69A0A075B6H9 119 aa12.94□□□□□ -0.34
SF1-213ENST00000472725 H3BRM9 83 aa12.94□□□□□ -0.34
SF1-213ENST00000472725 KRTAP10-1P60331 282 aa12.94□□□□□ -0.34
SF1-213ENST00000472725 CDK2AP2O75956 126 aa12.93□□□□□ -0.34
SF1-213ENST00000472725 SYCNQ0VAF6 134 aa12.93□□□□□ -0.34
SF1-213ENST00000472725 CHAC1Q9BUX1 264 aa12.93□□□□□ -0.34
SF1-213ENST00000472725 CHTOPQ9Y3Y2 248 aaKnown RBP12.93□□□□□ -0.34
SF1-213ENST00000472725 PKHD1P08F94 4074 aa12.93□□□□□ -0.34
SF1-213ENST00000472725 CARD19Q96LW7 228 aa12.92□□□□□ -0.34
SF1-213ENST00000472725 F8VRH5 84 aa12.91□□□□□ -0.34
SF1-213ENST00000472725 CAMK2N2Q96S95 79 aa12.91□□□□□ -0.34
SF1-213ENST00000472725 FABP4P15090 132 aa12.9□□□□□ -0.34
SF1-213ENST00000472725 KIAA0087Q14695 138 aa12.9□□□□□ -0.34
SF1-213ENST00000472725 RNF151Q2KHN1 245 aa12.9□□□□□ -0.34
SF1-213ENST00000472725 Q8IZM0 81 aa12.9□□□□□ -0.34
SF1-213ENST00000472725 MAP1LC3CQ9BXW4 147 aa12.9□□□□□ -0.34
SF1-213ENST00000472725 SMIM1B2RUZ4 78 aa12.89□□□□□ -0.35
SF1-213ENST00000472725 NDUFA1O15239 70 aa12.89□□□□□ -0.35
SF1-213ENST00000472725 PRSS2P07478 247 aa12.89□□□□□ -0.35
SF1-213ENST00000472725 SDIM1Q6ZPB5 146 aa12.89□□□□□ -0.35
SF1-213ENST00000472725 Q6ZSA8 131 aa12.89□□□□□ -0.35
SF1-213ENST00000472725 LINC00526Q96FQ7 95 aa12.89□□□□□ -0.35
SF1-213ENST00000472725 ZNF22P17026 224 aaPredicted RBP12.88□□□□□ -0.35
SF1-213ENST00000472725 MRPL35Q9NZE8 188 aaKnown RBP12.88□□□□□ -0.35
SF1-213ENST00000472725 C11orf86A6NJI1 115 aa12.87□□□□□ -0.35
SF1-213ENST00000472725 ODF1Q14990 250 aa12.87□□□□□ -0.35
SF1-213ENST00000472725 LINC01620Q4KN68 170 aa12.87□□□□□ -0.35
SF1-213ENST00000472725 CXCL5P42830 114 aa12.86□□□□□ -0.35
SF1-213ENST00000472725 C6orf226Q5I0X4 101 aa12.86□□□□□ -0.35
SF1-213ENST00000472725 Q6ZRU5 148 aa12.86□□□□□ -0.35
SF1-213ENST00000472725 IGLV5-39A0A0G2JS06 123 aa12.84□□□□□ -0.35
SF1-213ENST00000472725 TRBV30A0A0K0K1B3 111 aa12.84□□□□□ -0.35
SF1-213ENST00000472725 PLNP26678 52 aa12.84□□□□□ -0.35
SF1-213ENST00000472725 CKS1BP61024 79 aa12.84□□□□□ -0.35
SF1-213ENST00000472725 TMEM170BQ5T4T1 132 aa12.84□□□□□ -0.35
SF1-213ENST00000472725 TOMM7Q9P0U1 55 aa12.84□□□□□ -0.35
SF1-213ENST00000472725 S100A6P06703 90 aa12.83□□□□□ -0.36
SF1-213ENST00000472725 SPINK8P0C7L1 97 aa12.83□□□□□ -0.36
SF1-213ENST00000472725 COX7B2Q8TF08 81 aa12.83□□□□□ -0.36
SF1-213ENST00000472725 H0Y8G0 127 aa12.82□□□□□ -0.36
SF1-213ENST00000472725 SYS1-DBNDD2H3BUS1 97 aa12.82□□□□□ -0.36
SF1-213ENST00000472725 FAM30AQ9NZY2 134 aa12.82□□□□□ -0.36
SF1-213ENST00000472725 LINC00474Q9P2X8 69 aa12.82□□□□□ -0.36
SF1-213ENST00000472725 DYNC1H1Q14204 4646 aaKnown RBP12.81□□□□□ -0.36
SF1-213ENST00000472725 LOC107984640A0A0U1RRK4 108 aa12.81□□□□□ -0.36
SF1-213ENST00000472725 CIRBPQ14011 172 aaKnown RBP12.81□□□□□ -0.36
SF1-213ENST00000472725 UNQ6190/PRO20217Q6UXQ8 127 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 139.9 ms