RNA–Protein interactions for RNA: ENST00000472230.5

GCFC2-208, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2

Gene GCFC2, Length 2,265 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-208ENST00000472230 SPATA25Q9BR10 227 aa12.67□□□□□ -0.38
GCFC2-208ENST00000472230 A0A0J9YXY3 114 aa12.67□□□□□ -0.38
GCFC2-208ENST00000472230 SMIM1B2RUZ4 78 aa12.67□□□□□ -0.38
GCFC2-208ENST00000472230 TMEM238C9JI98 176 aa12.67□□□□□ -0.38
GCFC2-208ENST00000472230 K7EIL1 84 aa12.67□□□□□ -0.38
GCFC2-208ENST00000472230 Q6ZTC4 211 aa12.67□□□□□ -0.38
GCFC2-208ENST00000472230 C10orf126Q8N4M7 172 aa12.67□□□□□ -0.38
GCFC2-208ENST00000472230 VAMP3Q15836 100 aa12.66□□□□□ -0.38
GCFC2-208ENST00000472230 IGLV5-39A0A0G2JS06 123 aa12.65□□□□□ -0.38
GCFC2-208ENST00000472230 LELP1Q5T871 98 aa12.65□□□□□ -0.38
GCFC2-208ENST00000472230 C9orf118A6NHY6 69 aa12.65□□□□□ -0.38
GCFC2-208ENST00000472230 SS18Q15532 418 aa12.65□□□□□ -0.38
GCFC2-208ENST00000472230 C11orf45Q8TAV5 145 aa12.65□□□□□ -0.38
GCFC2-208ENST00000472230 LINC00959A0A1B0GUT2 108 aa12.64□□□□□ -0.39
GCFC2-208ENST00000472230 H3BNG1 76 aa12.64□□□□□ -0.39
GCFC2-208ENST00000472230 K7ERJ3 54 aa12.64□□□□□ -0.39
GCFC2-208ENST00000472230 MRAPQ8TCY5 172 aa12.64□□□□□ -0.39
GCFC2-208ENST00000472230 PKD1L1Q8TDX9 2849 aa12.64□□□□□ -0.39
GCFC2-208ENST00000472230 CMYA5Q8N3K9 4069 aa12.63□□□□□ -0.39
GCFC2-208ENST00000472230 NDUFA1O15239 70 aa12.63□□□□□ -0.39
GCFC2-208ENST00000472230 IGHV3-30P01768 117 aa12.63□□□□□ -0.39
GCFC2-208ENST00000472230 IGHV3-30-5P0DP03 117 aa12.63□□□□□ -0.39
GCFC2-208ENST00000472230 NANOS2P60321 138 aaKnown RBP12.63□□□□□ -0.39
GCFC2-208ENST00000472230 KPRPQ5T749 579 aaPredicted RBP12.63□□□□□ -0.39
GCFC2-208ENST00000472230 H3BUT2 72 aa12.62□□□□□ -0.39
GCFC2-208ENST00000472230 CLPSL2Q6UWE3 100 aa12.62□□□□□ -0.39
GCFC2-208ENST00000472230 ANGP03950 147 aaKnown RBP12.62□□□□□ -0.39
GCFC2-208ENST00000472230 TM2D3Q9BRN9 247 aa12.61□□□□□ -0.39
GCFC2-208ENST00000472230 CCL25O15444 150 aa12.6□□□□□ -0.39
GCFC2-208ENST00000472230 Q9H8V8 135 aa12.6□□□□□ -0.39
GCFC2-208ENST00000472230 DEFB131BA0A096LNP1 70 aa12.6□□□□□ -0.39
GCFC2-208ENST00000472230 LYPD5Q6UWN5 251 aa12.6□□□□□ -0.39
GCFC2-208ENST00000472230 LINC00269Q8N2A0 174 aa12.6□□□□□ -0.39
GCFC2-208ENST00000472230 NAA38Q9BRA0 125 aaKnown RBP12.6□□□□□ -0.39
GCFC2-208ENST00000472230 IGHV3OR16-9A0A0B4J2B5 98 aa12.59□□□□□ -0.39
GCFC2-208ENST00000472230 A0A1B0GWB2 263 aa12.59□□□□□ -0.39
GCFC2-208ENST00000472230 CIRBPQ14011 172 aaKnown RBP12.59□□□□□ -0.39
GCFC2-208ENST00000472230 XCL1P47992 114 aa12.58□□□□□ -0.4
GCFC2-208ENST00000472230 RPL24P83731 157 aaKnown RBP12.58□□□□□ -0.4
GCFC2-208ENST00000472230 C5orf38Q86SI9 138 aa12.58□□□□□ -0.4
GCFC2-208ENST00000472230 A0A087WZ39 114 aa12.58□□□□□ -0.4
GCFC2-208ENST00000472230 TIMM17BO60830 172 aa12.58□□□□□ -0.4
GCFC2-208ENST00000472230 MUSTN1Q8IVN3 82 aa12.58□□□□□ -0.4
GCFC2-208ENST00000472230 COX7B2Q8TF08 81 aa12.58□□□□□ -0.4
GCFC2-208ENST00000472230 TOMM7Q9P0U1 55 aa12.58□□□□□ -0.4
GCFC2-208ENST00000472230 APOMO95445 188 aa12.57□□□□□ -0.4
GCFC2-208ENST00000472230 PRSS2P07478 247 aa12.57□□□□□ -0.4
GCFC2-208ENST00000472230 REG3AQ06141 175 aa12.57□□□□□ -0.4
GCFC2-208ENST00000472230 UBE2V1Q13404 147 aa12.57□□□□□ -0.4
GCFC2-208ENST00000472230 SPANXDQ9BXN6 97 aa12.57□□□□□ -0.4
GCFC2-208ENST00000472230 SPANXCQ9NY87 97 aa12.57□□□□□ -0.4
GCFC2-208ENST00000472230 Q8N3U1 123 aa12.57□□□□□ -0.4
GCFC2-208ENST00000472230 LITAFQ99732 161 aa12.57□□□□□ -0.4
GCFC2-208ENST00000472230 HERV-K104P63124 156 aa12.56□□□□□ -0.4
GCFC2-208ENST00000472230 ZNF625Q96I27 306 aaPredicted RBP12.56□□□□□ -0.4
GCFC2-208ENST00000472230 A0A1W2PPM0 123 aa12.55□□□□□ -0.4
GCFC2-208ENST00000472230 MIAQ16674 131 aa12.55□□□□□ -0.4
GCFC2-208ENST00000472230 MEIG1Q5JSS6 88 aa12.55□□□□□ -0.4
GCFC2-208ENST00000472230 IGLL5B9A064 214 aa12.54□□□□□ -0.4
GCFC2-208ENST00000472230 FABP2P12104 132 aa12.54□□□□□ -0.4
GCFC2-208ENST00000472230 ADAMTSL4-AS1Q5T5F5 129 aa12.54□□□□□ -0.4
GCFC2-208ENST00000472230 A4D1N5 150 aa12.54□□□□□ -0.4
GCFC2-208ENST00000472230 GAGE10A6NGK3 116 aa12.53□□□□□ -0.4
GCFC2-208ENST00000472230 DNAH3Q8TD57 4116 aa12.53□□□□□ -0.4
GCFC2-208ENST00000472230 TRAV10A0A0B4J240 114 aa12.53□□□□□ -0.4
GCFC2-208ENST00000472230 GTF2H5Q6ZYL4 71 aa12.53□□□□□ -0.4
GCFC2-208ENST00000472230 CHCHD10Q8WYQ3 142 aaPredicted RBP12.53□□□□□ -0.4
GCFC2-208ENST00000472230 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.52□□□□□ -0.41
GCFC2-208ENST00000472230 CD164L2Q6UWJ8 174 aa12.52□□□□□ -0.41
GCFC2-208ENST00000472230 IGLV10-54A0A075B6I4 117 aa12.51□□□□□ -0.41
GCFC2-208ENST00000472230 CFC1BP0CG36 223 aa12.51□□□□□ -0.41
GCFC2-208ENST00000472230 CFC1P0CG37 223 aa12.51□□□□□ -0.41
GCFC2-208ENST00000472230 LINC01561Q8N1V8 128 aa12.51□□□□□ -0.41
GCFC2-208ENST00000472230 PGPEP1Q9NXJ5 209 aa12.51□□□□□ -0.41
GCFC2-208ENST00000472230 KLK12Q9UKR0 248 aa12.51□□□□□ -0.41
GCFC2-208ENST00000472230 IGHV3-33P01772 117 aa12.51□□□□□ -0.41
GCFC2-208ENST00000472230 IFITM1P13164 125 aa12.51□□□□□ -0.41
GCFC2-208ENST00000472230 NPC2P61916 151 aa12.51□□□□□ -0.41
GCFC2-208ENST00000472230 A0A0U1RRA0 63 aa12.5□□□□□ -0.41
GCFC2-208ENST00000472230 COX7A2LO14548 114 aa12.5□□□□□ -0.41
GCFC2-208ENST00000472230 SPCS1Q9Y6A9 102 aa12.5□□□□□ -0.41
GCFC2-208ENST00000472230 DAND5Q8N907 189 aa12.49□□□□□ -0.41
GCFC2-208ENST00000472230 K7EP34 96 aa12.49□□□□□ -0.41
GCFC2-208ENST00000472230 CRPP02741 224 aa12.49□□□□□ -0.41
GCFC2-208ENST00000472230 ESRGQ1W209 222 aa12.49□□□□□ -0.41
GCFC2-208ENST00000472230 C6orf226Q5I0X4 101 aa12.49□□□□□ -0.41
GCFC2-208ENST00000472230 WFDC10BQ8IUB3 73 aa12.49□□□□□ -0.41
GCFC2-208ENST00000472230 COPS9Q8WXC6 57 aa12.49□□□□□ -0.41
GCFC2-208ENST00000472230 PRO1854Q9UHT4 67 aa12.49□□□□□ -0.41
GCFC2-208ENST00000472230 NOTCH1P46531 2555 aa12.48□□□□□ -0.41
GCFC2-208ENST00000472230 ANK2Q01484 3957 aa12.48□□□□□ -0.41
GCFC2-208ENST00000472230 MALP21145 153 aa12.48□□□□□ -0.41
GCFC2-208ENST00000472230 SFTA2Q6UW10 78 aa12.48□□□□□ -0.41
GCFC2-208ENST00000472230 A0A0B4J2C4 111 aa12.48□□□□□ -0.41
GCFC2-208ENST00000472230 C15orf53Q8NAA6 179 aa12.46□□□□□ -0.41
GCFC2-208ENST00000472230 PRR34Q9NV39 138 aa12.46□□□□□ -0.41
GCFC2-208ENST00000472230 TSPAN13O95857 204 aa12.46□□□□□ -0.42
GCFC2-208ENST00000472230 Q8IZM0 81 aa12.46□□□□□ -0.42
GCFC2-208ENST00000472230 UBE2WQ96B02 151 aa12.45□□□□□ -0.42
GCFC2-208ENST00000472230 GAGE12HA6NDE8 117 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms