RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 F8WDY8 70 aa8.3□□□□□ -1.08
SPTLC1-204ENST00000469778 LINC00242Q5T6M2 205 aa8.3□□□□□ -1.08
SPTLC1-204ENST00000469778 LINC00173Q6ZV60 143 aa8.3□□□□□ -1.08
SPTLC1-204ENST00000469778 PACRGQ96M98 296 aaPredicted RBP8.3□□□□□ -1.08
SPTLC1-204ENST00000469778 HSPB8Q9UJY1 196 aa8.3□□□□□ -1.08
SPTLC1-204ENST00000469778 A0A087WZ39 114 aa8.29□□□□□ -1.08
SPTLC1-204ENST00000469778 GEMIN7Q9H840 131 aaKnown RBP8.29□□□□□ -1.08
SPTLC1-204ENST00000469778 GVQW2A0A096LPI5 108 aaPredicted RBP8.28□□□□□ -1.08
SPTLC1-204ENST00000469778 IGLV5-52A0A0A0MRZ9 124 aa8.28□□□□□ -1.08
SPTLC1-204ENST00000469778 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.28□□□□□ -1.08
SPTLC1-204ENST00000469778 TINCRA0A1B0GVN0 87 aa8.28□□□□□ -1.08
SPTLC1-204ENST00000469778 LECT2O14960 151 aa8.28□□□□□ -1.08
SPTLC1-204ENST00000469778 LEPROTL1O95214 131 aa8.28□□□□□ -1.08
SPTLC1-204ENST00000469778 PRSS1P07477 247 aa8.28□□□□□ -1.08
SPTLC1-204ENST00000469778 CNBPP62633 177 aaKnown RBP8.28□□□□□ -1.08
SPTLC1-204ENST00000469778 WFDC2Q14508 124 aa8.28□□□□□ -1.08
SPTLC1-204ENST00000469778 PMCHL1Q16048 86 aa8.28□□□□□ -1.08
SPTLC1-204ENST00000469778 OR10D4PQ8NGN7 298 aa8.28□□□□□ -1.08
SPTLC1-204ENST00000469778 IFI27L1Q96BM0 104 aa8.28□□□□□ -1.08
SPTLC1-204ENST00000469778 TRAV12-1A0A0B4J245 112 aa8.27□□□□□ -1.09
SPTLC1-204ENST00000469778 hDV102S1A0JD36 115 aa8.27□□□□□ -1.09
SPTLC1-204ENST00000469778 FAT2Q9NYQ8 4349 aa8.27□□□□□ -1.09
SPTLC1-204ENST00000469778 C16orf90A8MZG2 172 aa8.26□□□□□ -1.09
SPTLC1-204ENST00000469778 ZNF561-AS1K7EIQ3 104 aa8.26□□□□□ -1.09
SPTLC1-204ENST00000469778 NDUFA6P56556 154 aa8.26□□□□□ -1.09
SPTLC1-204ENST00000469778 LINC00310P59036 64 aa8.26□□□□□ -1.09
SPTLC1-204ENST00000469778 KRTAP10-2P60368 255 aa8.26□□□□□ -1.09
SPTLC1-204ENST00000469778 C5orf38Q86SI9 138 aa8.26□□□□□ -1.09
SPTLC1-204ENST00000469778 FAM19A2Q8N3H0 131 aa8.26□□□□□ -1.09
SPTLC1-204ENST00000469778 C15orf56Q8N910 161 aa8.26□□□□□ -1.09
SPTLC1-204ENST00000469778 PKIGQ9Y2B9 76 aa8.26□□□□□ -1.09
SPTLC1-204ENST00000469778 IGHV3-64A0A075B6Q5 118 aa8.25□□□□□ -1.09
SPTLC1-204ENST00000469778 IGLV5-45A0A087WSX0 123 aa8.25□□□□□ -1.09
SPTLC1-204ENST00000469778 H3BRM9 83 aa8.25□□□□□ -1.09
SPTLC1-204ENST00000469778 GCSHP23434 173 aa8.25□□□□□ -1.09
SPTLC1-204ENST00000469778 C2orf48Q96LS8 159 aa8.25□□□□□ -1.09
SPTLC1-204ENST00000469778 A0A0J9YXV3 536 aa8.24□□□□□ -1.09
SPTLC1-204ENST00000469778 IGLC3P0DOY3 106 aa8.24□□□□□ -1.09
SPTLC1-204ENST00000469778 COX6A2Q02221 97 aa8.24□□□□□ -1.09
SPTLC1-204ENST00000469778 ZC2HC1BQ5TFG8 222 aa8.24□□□□□ -1.09
SPTLC1-204ENST00000469778 C9orf163Q8N9P6 203 aa8.24□□□□□ -1.09
SPTLC1-204ENST00000469778 HECTD4Q9Y4D8 3996 aa8.24□□□□□ -1.09
SPTLC1-204ENST00000469778 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.23□□□□□ -1.09
SPTLC1-204ENST00000469778 NUPR1O60356 82 aa8.23□□□□□ -1.09
SPTLC1-204ENST00000469778 MAP1LC3CQ9BXW4 147 aa8.23□□□□□ -1.09
SPTLC1-204ENST00000469778 CHTOPQ9Y3Y2 248 aaKnown RBP8.23□□□□□ -1.09
SPTLC1-204ENST00000469778 LINC00469Q8N7U9 141 aa8.22□□□□□ -1.09
SPTLC1-204ENST00000469778 CDKN2A-AS1Q9UH64 79 aa8.22□□□□□ -1.09
SPTLC1-204ENST00000469778 PKD1P98161 4303 aa8.21□□□□□ -1.1
SPTLC1-204ENST00000469778 F8VRH5 84 aa8.21□□□□□ -1.1
SPTLC1-204ENST00000469778 RNF151Q2KHN1 245 aa8.21□□□□□ -1.1
SPTLC1-204ENST00000469778 ORAOV1Q8WV07 137 aa8.21□□□□□ -1.1
SPTLC1-204ENST00000469778 IGLV4-69A0A075B6H9 119 aa8.2□□□□□ -1.1
SPTLC1-204ENST00000469778 S100A6P06703 90 aa8.2□□□□□ -1.1
SPTLC1-204ENST00000469778 PRSS2P07478 247 aa8.2□□□□□ -1.1
SPTLC1-204ENST00000469778 FABP4P15090 132 aa8.2□□□□□ -1.1
SPTLC1-204ENST00000469778 SPAG11BQ08648 103 aa8.2□□□□□ -1.1
SPTLC1-204ENST00000469778 SYCNQ0VAF6 134 aa8.2□□□□□ -1.1
SPTLC1-204ENST00000469778 HIGD2BQ4VC39 106 aa8.2□□□□□ -1.1
SPTLC1-204ENST00000469778 CHAC1Q9BUX1 264 aa8.2□□□□□ -1.1
SPTLC1-204ENST00000469778 SLPIP03973 132 aa8.19□□□□□ -1.1
SPTLC1-204ENST00000469778 PLNP26678 52 aa8.19□□□□□ -1.1
SPTLC1-204ENST00000469778 AKR1D1P51857 326 aa8.19□□□□□ -1.1
SPTLC1-204ENST00000469778 Q8IZM0 81 aa8.19□□□□□ -1.1
SPTLC1-204ENST00000469778 NDUFA1O15239 70 aa8.18□□□□□ -1.1
SPTLC1-204ENST00000469778 CDK2AP2O75956 126 aa8.18□□□□□ -1.1
SPTLC1-204ENST00000469778 CXCL5P42830 114 aa8.18□□□□□ -1.1
SPTLC1-204ENST00000469778 KIAA0087Q14695 138 aa8.18□□□□□ -1.1
SPTLC1-204ENST00000469778 C6orf226Q5I0X4 101 aa8.18□□□□□ -1.1
SPTLC1-204ENST00000469778 SFTA2Q6UW10 78 aa8.18□□□□□ -1.1
SPTLC1-204ENST00000469778 CARD19Q96LW7 228 aa8.18□□□□□ -1.1
SPTLC1-204ENST00000469778 CAMK2N2Q96S95 79 aa8.18□□□□□ -1.1
SPTLC1-204ENST00000469778 MRPL35Q9NZE8 188 aaKnown RBP8.18□□□□□ -1.1
SPTLC1-204ENST00000469778 EPPK1P58107 5090 aaKnown RBP8.18□□□□□ -1.1
SPTLC1-204ENST00000469778 C11orf86A6NJI1 115 aa8.17□□□□□ -1.1
SPTLC1-204ENST00000469778 SMIM1B2RUZ4 78 aa8.17□□□□□ -1.1
SPTLC1-204ENST00000469778 CKS1BP61024 79 aa8.17□□□□□ -1.1
SPTLC1-204ENST00000469778 ODF1Q14990 250 aa8.17□□□□□ -1.1
SPTLC1-204ENST00000469778 PET117Q6UWS5 81 aa8.17□□□□□ -1.1
SPTLC1-204ENST00000469778 SDIM1Q6ZPB5 146 aa8.17□□□□□ -1.1
SPTLC1-204ENST00000469778 LINC00474Q9P2X8 69 aa8.17□□□□□ -1.1
SPTLC1-204ENST00000469778 IGLV5-39A0A0G2JS06 123 aa8.16□□□□□ -1.1
SPTLC1-204ENST00000469778 TRBV30A0A0K0K1B3 111 aa8.16□□□□□ -1.1
SPTLC1-204ENST00000469778 SYS1-DBNDD2H3BUS1 97 aa8.16□□□□□ -1.1
SPTLC1-204ENST00000469778 PKHD1P08F94 4074 aa8.16□□□□□ -1.1
SPTLC1-204ENST00000469778 ZNF22P17026 224 aaPredicted RBP8.16□□□□□ -1.1
SPTLC1-204ENST00000469778 KRTAP10-1P60331 282 aa8.16□□□□□ -1.1
SPTLC1-204ENST00000469778 TMEM170BQ5T4T1 132 aa8.16□□□□□ -1.1
SPTLC1-204ENST00000469778 DNAH11Q96DT5 4516 aa8.16□□□□□ -1.1
SPTLC1-204ENST00000469778 DPM2O94777 84 aa8.15□□□□□ -1.1
SPTLC1-204ENST00000469778 S100A2P29034 98 aa8.15□□□□□ -1.1
SPTLC1-204ENST00000469778 Q6ZSA8 131 aa8.15□□□□□ -1.1
SPTLC1-204ENST00000469778 FUSP35637 526 aaKnown RBP eCLIP8.14□□□□□ -1.11
SPTLC1-204ENST00000469778 Q6ZRU5 148 aa8.14□□□□□ -1.11
SPTLC1-204ENST00000469778 COX7B2Q8TF08 81 aa8.14□□□□□ -1.11
SPTLC1-204ENST00000469778 LINC00526Q96FQ7 95 aa8.14□□□□□ -1.11
SPTLC1-204ENST00000469778 TOMM7Q9P0U1 55 aa8.14□□□□□ -1.11
SPTLC1-204ENST00000469778 LOC107984640A0A0U1RRK4 108 aa8.13□□□□□ -1.11
SPTLC1-204ENST00000469778 TMEM223A0PJW6 202 aa8.13□□□□□ -1.11
SPTLC1-204ENST00000469778 C20orf202A1L168 122 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms