RNA–Protein interactions for RNA: ENST00000469043.1

SCFD1-205, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-205ENST00000469043 MAP1BP46821 2468 aaKnown RBP2.34□□□□□ -2.04
SCFD1-205ENST00000469043 CACNA1CQ13936 2221 aa2.34□□□□□ -2.04
SCFD1-205ENST00000469043 URB1O60287 2271 aaKnown RBP2.34□□□□□ -2.04
SCFD1-205ENST00000469043 GVINP1Q7Z2Y8 2422 aa2.33□□□□□ -2.04
SCFD1-205ENST00000469043 LAMA1P25391 3075 aa2.33□□□□□ -2.04
SCFD1-205ENST00000469043 MED13Q9UHV7 2174 aa2.33□□□□□ -2.04
SCFD1-205ENST00000469043 TRBV10-1A0A0K0K1A3 114 aa2.33□□□□□ -2.04
SCFD1-205ENST00000469043 HCP5Q6MZN7 132 aa2.33□□□□□ -2.04
SCFD1-205ENST00000469043 USP34Q70CQ2 3546 aa2.33□□□□□ -2.04
SCFD1-205ENST00000469043 VPS13AQ96RL7 3174 aa2.32□□□□□ -2.04
SCFD1-205ENST00000469043 TRBV6-4A0A1B0GX49 114 aa2.32□□□□□ -2.04
SCFD1-205ENST00000469043 H0YGG7 62 aa2.32□□□□□ -2.04
SCFD1-205ENST00000469043 GNGT2O14610 69 aa2.32□□□□□ -2.04
SCFD1-205ENST00000469043 IGLC1P0CG04 106 aa2.32□□□□□ -2.04
SCFD1-205ENST00000469043 RNASE3P12724 160 aaKnown RBP2.32□□□□□ -2.04
SCFD1-205ENST00000469043 DEFB133Q30KQ1 61 aa2.32□□□□□ -2.04
SCFD1-205ENST00000469043 PYY3Q5JQD4 70 aa2.32□□□□□ -2.04
SCFD1-205ENST00000469043 LINC00299Q6ZSB3 139 aa2.32□□□□□ -2.04
SCFD1-205ENST00000469043 LIMD2Q9BT23 127 aa2.32□□□□□ -2.04
SCFD1-205ENST00000469043 ATG5Q9H1Y0 275 aa2.32□□□□□ -2.04
SCFD1-205ENST00000469043 CDC42SE1Q9NRR8 79 aa2.32□□□□□ -2.04
SCFD1-205ENST00000469043 KLK9Q9UKQ9 250 aa2.32□□□□□ -2.04
SCFD1-205ENST00000469043 C22orf24Q9Y442 160 aa2.32□□□□□ -2.04
SCFD1-205ENST00000469043 ABCA4P78363 2273 aa2.31□□□□□ -2.04
SCFD1-205ENST00000469043 CACNA1GO43497 2377 aa2.31□□□□□ -2.04
SCFD1-205ENST00000469043 A0A0C4DFX4 3053 aa2.31□□□□□ -2.04
SCFD1-205ENST00000469043 NCOA6Q14686 2063 aaPredicted RBP2.31□□□□□ -2.04
SCFD1-205ENST00000469043 TRAV13-2A0A0B4J235 113 aa2.31□□□□□ -2.04
SCFD1-205ENST00000469043 NUPR2A6NF83 97 aa2.31□□□□□ -2.04
SCFD1-205ENST00000469043 CCKP06307 115 aa2.31□□□□□ -2.04
SCFD1-205ENST00000469043 Q0VG73 95 aa2.31□□□□□ -2.04
SCFD1-205ENST00000469043 SPRNQ5BIV9 151 aa2.31□□□□□ -2.04
SCFD1-205ENST00000469043 NDUFA11Q86Y39 141 aa2.31□□□□□ -2.04
SCFD1-205ENST00000469043 DEFB119Q8N690 84 aa2.31□□□□□ -2.04
SCFD1-205ENST00000469043 IFI27L1Q96BM0 104 aa2.31□□□□□ -2.04
SCFD1-205ENST00000469043 REG4Q9BYZ8 158 aa2.31□□□□□ -2.04
SCFD1-205ENST00000469043 MRPL35Q9NZE8 188 aaKnown RBP2.31□□□□□ -2.04
SCFD1-205ENST00000469043 MRPL36Q9P0J6 103 aaKnown RBP2.31□□□□□ -2.04
SCFD1-205ENST00000469043 SPTBN2O15020 2390 aa2.31□□□□□ -2.04
SCFD1-205ENST00000469043 RP1L1Q8IWN7 2480 aaPredicted RBP2.31□□□□□ -2.04
SCFD1-205ENST00000469043 PIEZO1Q92508 2521 aa2.31□□□□□ -2.04
SCFD1-205ENST00000469043 ZNF292O60281 2723 aa2.3□□□□□ -2.04
SCFD1-205ENST00000469043 TRAV12-3A0A0B4J271 114 aa2.3□□□□□ -2.04
SCFD1-205ENST00000469043 A0A0J9YY99 117 aa2.3□□□□□ -2.04
SCFD1-205ENST00000469043 HCG22E2RYF7 251 aa2.3□□□□□ -2.04
SCFD1-205ENST00000469043 HMGN4O00479 90 aa2.3□□□□□ -2.04
SCFD1-205ENST00000469043 NUPR1O60356 82 aa2.3□□□□□ -2.04
SCFD1-205ENST00000469043 PPYP01298 95 aa2.3□□□□□ -2.04
SCFD1-205ENST00000469043 SMIM11AP58511 58 aa2.3□□□□□ -2.04
SCFD1-205ENST00000469043 KRTAP10-10P60014 251 aa2.3□□□□□ -2.04
SCFD1-205ENST00000469043 COA5Q86WW8 74 aa2.3□□□□□ -2.04
SCFD1-205ENST00000469043 MYOZ3Q8TDC0 251 aa2.3□□□□□ -2.04
SCFD1-205ENST00000469043 DMAC1Q96GE9 116 aa2.3□□□□□ -2.04
SCFD1-205ENST00000469043 ODF3Q96PU9 254 aa2.3□□□□□ -2.04
SCFD1-205ENST00000469043 PMCHL2Q9BQD1 86 aa2.3□□□□□ -2.04
SCFD1-205ENST00000469043 U3KQA8 63 aa2.3□□□□□ -2.04
SCFD1-205ENST00000469043 MYO7BQ6PIF6 2116 aa2.3□□□□□ -2.04
SCFD1-205ENST00000469043 WDFY4Q6ZS81 3184 aa2.3□□□□□ -2.04
SCFD1-205ENST00000469043 APC2O95996 2303 aa2.29□□□□□ -2.04
SCFD1-205ENST00000469043 HMGN2P05204 90 aaKnown RBP2.29□□□□□ -2.04
SCFD1-205ENST00000469043 CCL8P80075 99 aa2.29□□□□□ -2.04
SCFD1-205ENST00000469043 DEFB110Q30KQ9 67 aa2.29□□□□□ -2.04
SCFD1-205ENST00000469043 LINC00474Q9P2X8 69 aa2.29□□□□□ -2.04
SCFD1-205ENST00000469043 MYO15AQ9UKN7 3530 aa2.29□□□□□ -2.04
SCFD1-205ENST00000469043 SPTBN4Q9H254 2564 aa2.29□□□□□ -2.04
SCFD1-205ENST00000469043 PCNX1Q96RV3 2341 aa2.28□□□□□ -2.04
SCFD1-205ENST00000469043 PTPRQQ9UMZ3 2332 aa2.28□□□□□ -2.04
SCFD1-205ENST00000469043 TRBV6-5A0A0K0K1A5 114 aa2.28□□□□□ -2.04
SCFD1-205ENST00000469043 hADV29S1A0JD25 119 aa2.28□□□□□ -2.04
SCFD1-205ENST00000469043 JMJD7-PLA2G4BH0Y9G9 81 aa2.28□□□□□ -2.04
SCFD1-205ENST00000469043 IGKV1-17P01599 117 aa2.28□□□□□ -2.04
SCFD1-205ENST00000469043 STATHP02808 62 aa2.28□□□□□ -2.04
SCFD1-205ENST00000469043 NPVFQ9HCQ7 196 aa2.28□□□□□ -2.04
SCFD1-205ENST00000469043 SPTA1P02549 2419 aa2.28□□□□□ -2.04
SCFD1-205ENST00000469043 FRYLO94915 3013 aa2.28□□□□□ -2.05
SCFD1-205ENST00000469043 DMDP11532 3685 aa2.28□□□□□ -2.05
SCFD1-205ENST00000469043 TPRP12270 2363 aaKnown RBP2.27□□□□□ -2.05
SCFD1-205ENST00000469043 IGKV3-7A0A075B6H7 116 aa2.27□□□□□ -2.05
SCFD1-205ENST00000469043 MRPS14O60783 128 aaKnown RBP2.27□□□□□ -2.05
SCFD1-205ENST00000469043 DNAL4O96015 105 aa2.27□□□□□ -2.05
SCFD1-205ENST00000469043 IGLV3-1P01715 115 aa2.27□□□□□ -2.05
SCFD1-205ENST00000469043 IGHV3-30P01768 117 aa2.27□□□□□ -2.05
SCFD1-205ENST00000469043 IGHV3-30-5P0DP03 117 aa2.27□□□□□ -2.05
SCFD1-205ENST00000469043 KRTDAPP60985 99 aa2.27□□□□□ -2.05
SCFD1-205ENST00000469043 MPV17LQ2QL34 196 aa2.27□□□□□ -2.05
SCFD1-205ENST00000469043 SPEGQ15772 3267 aa2.27□□□□□ -2.05
SCFD1-205ENST00000469043 A0A087WXM4 84 aa2.26□□□□□ -2.05
SCFD1-205ENST00000469043 SMIM31A0A1B0GVY4 71 aa2.26□□□□□ -2.05
SCFD1-205ENST00000469043 NAP1L6A6NFF2 107 aa2.26□□□□□ -2.05
SCFD1-205ENST00000469043 SIX6O95475 246 aa2.26□□□□□ -2.05
SCFD1-205ENST00000469043 PDE6GP18545 87 aa2.26□□□□□ -2.05
SCFD1-205ENST00000469043 C6orf52Q5T4I8 152 aa2.26□□□□□ -2.05
SCFD1-205ENST00000469043 C15orf53Q8NAA6 179 aa2.26□□□□□ -2.05
SCFD1-205ENST00000469043 TSLPQ969D9 159 aa2.26□□□□□ -2.05
SCFD1-205ENST00000469043 CYP4F30PQ9H0H9 118 aa2.26□□□□□ -2.05
SCFD1-205ENST00000469043 WFDC10AQ9H1F0 79 aa2.26□□□□□ -2.05
SCFD1-205ENST00000469043 BET1LQ9NYM9 111 aa2.26□□□□□ -2.05
SCFD1-205ENST00000469043 ANKRD11Q6UB99 2663 aaPredicted RBP2.25□□□□□ -2.05
SCFD1-205ENST00000469043 TRAV23DV6A0A075B6W5 121 aa2.25□□□□□ -2.05
SCFD1-205ENST00000469043 IGLV3-32A0A0A0MS00 114 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms