RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 A0A096LNJ9 63 aa2.77□□□□□ -1.97
TMEM39A-204ENST00000468545 IGLV9-49A0A0B4J1Y8 123 aa2.77□□□□□ -1.97
TMEM39A-204ENST00000468545 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.77□□□□□ -1.97
TMEM39A-204ENST00000468545 K7EMI3 77 aa2.77□□□□□ -1.97
TMEM39A-204ENST00000468545 ATP5LO75964 103 aa2.77□□□□□ -1.97
TMEM39A-204ENST00000468545 ANGP03950 147 aaKnown RBP2.77□□□□□ -1.97
TMEM39A-204ENST00000468545 CFC1BP0CG36 223 aa2.77□□□□□ -1.97
TMEM39A-204ENST00000468545 CFC1P0CG37 223 aa2.77□□□□□ -1.97
TMEM39A-204ENST00000468545 RBX1P62877 108 aa2.77□□□□□ -1.97
TMEM39A-204ENST00000468545 CLPSL2Q6UWE3 100 aa2.77□□□□□ -1.97
TMEM39A-204ENST00000468545 ERASQ7Z444 233 aa2.77□□□□□ -1.97
TMEM39A-204ENST00000468545 WFDC10BQ8IUB3 73 aa2.77□□□□□ -1.97
TMEM39A-204ENST00000468545 ZNF664Q8N3J9 261 aa2.77□□□□□ -1.97
TMEM39A-204ENST00000468545 OR5A1Q8NGJ0 315 aa2.77□□□□□ -1.97
TMEM39A-204ENST00000468545 IFI27L1Q96BM0 104 aa2.77□□□□□ -1.97
TMEM39A-204ENST00000468545 TMEM141Q96I45 108 aa2.77□□□□□ -1.97
TMEM39A-204ENST00000468545 PACRGQ96M98 296 aaPredicted RBP2.77□□□□□ -1.97
TMEM39A-204ENST00000468545 HIST1H2BLQ99880 126 aa2.77□□□□□ -1.97
TMEM39A-204ENST00000468545 PMCHL2Q9BQD1 86 aa2.77□□□□□ -1.97
TMEM39A-204ENST00000468545 MAP1LC3CQ9BXW4 147 aa2.77□□□□□ -1.97
TMEM39A-204ENST00000468545 VCX2Q9H322 139 aa2.77□□□□□ -1.97
TMEM39A-204ENST00000468545 KLK12Q9UKR0 248 aa2.77□□□□□ -1.97
TMEM39A-204ENST00000468545 UBE2D4Q9Y2X8 147 aa2.77□□□□□ -1.97
TMEM39A-204ENST00000468545 DNAH7Q8WXX0 4024 aa2.77□□□□□ -1.97
TMEM39A-204ENST00000468545 IGLV4-3A0A075B6K6 122 aa2.76□□□□□ -1.97
TMEM39A-204ENST00000468545 TRAV13-1A0A0B4J241 112 aa2.76□□□□□ -1.97
TMEM39A-204ENST00000468545 IGIPA6NJ69 53 aa2.76□□□□□ -1.97
TMEM39A-204ENST00000468545 H7C423 109 aa2.76□□□□□ -1.97
TMEM39A-204ENST00000468545 M0R2N4 97 aa2.76□□□□□ -1.97
TMEM39A-204ENST00000468545 SIVA1O15304 175 aa2.76□□□□□ -1.97
TMEM39A-204ENST00000468545 LY6G6CO95867 125 aa2.76□□□□□ -1.97
TMEM39A-204ENST00000468545 C3orf79P0CE67 100 aa2.76□□□□□ -1.97
TMEM39A-204ENST00000468545 KRTAP10-6P60371 365 aaPredicted RBP2.76□□□□□ -1.97
TMEM39A-204ENST00000468545 SMAGPQ0VAQ4 97 aa2.76□□□□□ -1.97
TMEM39A-204ENST00000468545 MPV17L2Q567V2 206 aa2.76□□□□□ -1.97
TMEM39A-204ENST00000468545 CASC10Q5T4H9 136 aa2.76□□□□□ -1.97
TMEM39A-204ENST00000468545 TEX43Q6ZNM6 134 aa2.76□□□□□ -1.97
TMEM39A-204ENST00000468545 Q6ZUT4 128 aa2.76□□□□□ -1.97
TMEM39A-204ENST00000468545 LINC00269Q8N2A0 174 aa2.76□□□□□ -1.97
TMEM39A-204ENST00000468545 MAPKAPK5-AS1Q8N8E1 139 aa2.76□□□□□ -1.97
TMEM39A-204ENST00000468545 BAALCQ8WXS3 180 aa2.76□□□□□ -1.97
TMEM39A-204ENST00000468545 UBE2WQ96B02 151 aa2.76□□□□□ -1.97
TMEM39A-204ENST00000468545 Q9H8V8 135 aa2.76□□□□□ -1.97
TMEM39A-204ENST00000468545 CDC42SE2Q9NRR3 84 aa2.76□□□□□ -1.97
TMEM39A-204ENST00000468545 SPANXA1Q9NS26 97 aa2.76□□□□□ -1.97
TMEM39A-204ENST00000468545 MRPS16Q9Y3D3 137 aaKnown RBP2.76□□□□□ -1.97
TMEM39A-204ENST00000468545 CHTOPQ9Y3Y2 248 aaKnown RBP2.76□□□□□ -1.97
TMEM39A-204ENST00000468545 IGLV10-54A0A075B6I4 117 aa2.75□□□□□ -1.97
TMEM39A-204ENST00000468545 A0A0J9YXV3 536 aa2.75□□□□□ -1.97
TMEM39A-204ENST00000468545 LOC105371267A0A1B0GV96 52 aa2.75□□□□□ -1.97
TMEM39A-204ENST00000468545 LINC01549A6NIU2 74 aa2.75□□□□□ -1.97
TMEM39A-204ENST00000468545 C3orf84H3BNL1 204 aa2.75□□□□□ -1.97
TMEM39A-204ENST00000468545 SYS1-DBNDD2H3BUS1 97 aa2.75□□□□□ -1.97
TMEM39A-204ENST00000468545 CRPP02741 224 aa2.75□□□□□ -1.97
TMEM39A-204ENST00000468545 TCTAP57738 103 aa2.75□□□□□ -1.97
TMEM39A-204ENST00000468545 PKIAP61925 76 aa2.75□□□□□ -1.97
TMEM39A-204ENST00000468545 REG3AQ06141 175 aa2.75□□□□□ -1.97
TMEM39A-204ENST00000468545 PMVKQ15126 192 aa2.75□□□□□ -1.97
TMEM39A-204ENST00000468545 PET117Q6UWS5 81 aa2.75□□□□□ -1.97
TMEM39A-204ENST00000468545 SPATA12Q7Z6I5 190 aa2.75□□□□□ -1.97
TMEM39A-204ENST00000468545 MRPL52Q86TS9 123 aaKnown RBP2.75□□□□□ -1.97
TMEM39A-204ENST00000468545 ATOH7Q8N100 152 aa2.75□□□□□ -1.97
TMEM39A-204ENST00000468545 TIMM17AQ99595 171 aa2.75□□□□□ -1.97
TMEM39A-204ENST00000468545 LITAFQ99732 161 aa2.75□□□□□ -1.97
TMEM39A-204ENST00000468545 C2orf88Q9BSF0 95 aa2.75□□□□□ -1.97
TMEM39A-204ENST00000468545 TIMM21Q9BVV7 248 aa2.75□□□□□ -1.97
TMEM39A-204ENST00000468545 CST9LQ9H4G1 147 aa2.75□□□□□ -1.97
TMEM39A-204ENST00000468545 Q9HAA7 133 aa2.75□□□□□ -1.97
TMEM39A-204ENST00000468545 PYGO1Q9Y3Y4 419 aa2.75□□□□□ -1.97
TMEM39A-204ENST00000468545 VPS13DQ5THJ4 4388 aa2.74□□□□□ -1.97
TMEM39A-204ENST00000468545 IGKV2D-24A0A075B6R9 120 aa2.74□□□□□ -1.97
TMEM39A-204ENST00000468545 TRAV9-2A0A087WT02 112 aa2.74□□□□□ -1.97
TMEM39A-204ENST00000468545 LINC00959A0A1B0GUT2 108 aa2.74□□□□□ -1.97
TMEM39A-204ENST00000468545 C20orf202A1L168 122 aa2.74□□□□□ -1.97
TMEM39A-204ENST00000468545 ZNF25P17030 456 aaPredicted RBP2.74□□□□□ -1.97
TMEM39A-204ENST00000468545 XCL1P47992 114 aa2.74□□□□□ -1.97
TMEM39A-204ENST00000468545 MRPS36P82909 103 aaKnown RBP2.74□□□□□ -1.97
TMEM39A-204ENST00000468545 COX6A2Q02221 97 aa2.74□□□□□ -1.97
TMEM39A-204ENST00000468545 SS18Q15532 418 aa2.74□□□□□ -1.97
TMEM39A-204ENST00000468545 FAM104AQ969W3 186 aa2.74□□□□□ -1.97
TMEM39A-204ENST00000468545 AMELXQ99217 191 aa2.74□□□□□ -1.97
TMEM39A-204ENST00000468545 GEMIN7Q9H840 131 aaKnown RBP2.74□□□□□ -1.97
TMEM39A-204ENST00000468545 MRPL35Q9NZE8 188 aaKnown RBP2.74□□□□□ -1.97
TMEM39A-204ENST00000468545 STARD9Q9P2P6 4700 aa2.74□□□□□ -1.97
TMEM39A-204ENST00000468545 IGHV3-64A0A075B6Q5 118 aa2.73□□□□□ -1.97
TMEM39A-204ENST00000468545 TRAV12-1A0A0B4J245 112 aa2.73□□□□□ -1.97
TMEM39A-204ENST00000468545 CCL25O15444 150 aa2.73□□□□□ -1.97
TMEM39A-204ENST00000468545 DPM2O94777 84 aa2.73□□□□□ -1.97
TMEM39A-204ENST00000468545 IGKCP01834 107 aa2.73□□□□□ -1.97
TMEM39A-204ENST00000468545 DNAH10OSP0CZ25 163 aa2.73□□□□□ -1.97
TMEM39A-204ENST00000468545 UBE2D1P51668 147 aa2.73□□□□□ -1.97
TMEM39A-204ENST00000468545 LINC01556Q5JQF7 62 aa2.73□□□□□ -1.97
TMEM39A-204ENST00000468545 TMEM170BQ5T4T1 132 aa2.73□□□□□ -1.97
TMEM39A-204ENST00000468545 LGALS9CQ6DKI2 356 aa2.73□□□□□ -1.97
TMEM39A-204ENST00000468545 ENHOQ6UWT2 76 aa2.73□□□□□ -1.97
TMEM39A-204ENST00000468545 C5orf38Q86SI9 138 aa2.73□□□□□ -1.97
TMEM39A-204ENST00000468545 UPK3BQ9BT76 320 aa2.73□□□□□ -1.97
TMEM39A-204ENST00000468545 CSDC2Q9Y534 153 aaKnown RBP2.73□□□□□ -1.97
TMEM39A-204ENST00000468545 COL7A1Q02388 2944 aa2.73□□□□□ -1.97
TMEM39A-204ENST00000468545 FBN3Q75N90 2809 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms