RNA–Protein interactions for RNA: ENST00000467438.1

LINC01140-202, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 2 BASIC

Gene LINC01140, Length 2,375 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-202ENST00000467438 TTC32Q5I0X7 151 aa15.13■□□□□ 0.01
LINC01140-202ENST00000467438 HIST2H2BCQ6DN03 193 aa15.13■□□□□ 0.01
LINC01140-202ENST00000467438 C15orf53Q8NAA6 179 aa15.13■□□□□ 0.01
LINC01140-202ENST00000467438 PLAC8L1A1L4L8 177 aa15.12■□□□□ 0.01
LINC01140-202ENST00000467438 DAZ2Q13117 558 aaKnown RBP15.12■□□□□ 0.01
LINC01140-202ENST00000467438 DAZ4Q86SG3 579 aaKnown RBP15.12■□□□□ 0.01
LINC01140-202ENST00000467438 DAZ3Q9NR90 486 aaKnown RBP15.12■□□□□ 0.01
LINC01140-202ENST00000467438 H3BT86 120 aa15.12■□□□□ 0.01
LINC01140-202ENST00000467438 NHLRC4P0CG21 123 aaPredicted RBP15.11■□□□□ 0.01
LINC01140-202ENST00000467438 GAGE2BQ13066 116 aa15.11■□□□□ 0.01
LINC01140-202ENST00000467438 GAGE2EQ4V326 116 aa15.11■□□□□ 0.01
LINC01140-202ENST00000467438 GAGE2DQ9UEU5 116 aa15.11■□□□□ 0.01
LINC01140-202ENST00000467438 TRBV10-1A0A0K0K1A3 114 aa15.1■□□□□ 0.01
LINC01140-202ENST00000467438 CSDC2Q9Y534 153 aaKnown RBP15.1■□□□□ 0.01
LINC01140-202ENST00000467438 TRGV2A0A075B6R0 118 aa15.1■□□□□ 0.01
LINC01140-202ENST00000467438 TRAV25A0A0B4J276 109 aa15.1■□□□□ 0.01
LINC01140-202ENST00000467438 FAM19A3Q7Z5A8 133 aa15.1■□□□□ 0.01
LINC01140-202ENST00000467438 ACANP16112 2415 aa15.09■□□□□ 0.01
LINC01140-202ENST00000467438 UBE2L6O14933 153 aa15.09■□□□□ 0.01
LINC01140-202ENST00000467438 GAGE6Q13070 117 aa15.07■□□□□ 0
LINC01140-202ENST00000467438 LRRC75A-AS1Q8N1F1 130 aa15.07■□□□□ 0
LINC01140-202ENST00000467438 TMEM243Q9BU79 118 aa15.07■□□□□ 0
LINC01140-202ENST00000467438 FAM218AQ96MZ4 157 aa15.06■□□□□ 0
LINC01140-202ENST00000467438 TOMM7Q9P0U1 55 aa15.06■□□□□ 0
LINC01140-202ENST00000467438 MTORP42345 2549 aa15.06■□□□□ 0
LINC01140-202ENST00000467438 IGLV4-60A0A075B6I1 120 aa15.05■□□□□ 0
LINC01140-202ENST00000467438 COX7A2LO14548 114 aa15.05■□□□□ 0
LINC01140-202ENST00000467438 SHISA2Q6UWI4 295 aa15.05■□□□□ 0
LINC01140-202ENST00000467438 NDUFV3P56181 108 aaKnown RBP15.04■□□□□ -0
LINC01140-202ENST00000467438 TMEM86BQ8N661 226 aa15.04■□□□□ -0
LINC01140-202ENST00000467438 LINC01006Q8NI28 216 aa15.03■□□□□ -0
LINC01140-202ENST00000467438 C19orf73Q9NVV2 129 aa15.03■□□□□ -0
LINC01140-202ENST00000467438 ANK3Q12955 4377 aaKnown RBP15.02■□□□□ -0
LINC01140-202ENST00000467438 TENM4Q6N022 2769 aa15.02■□□□□ -0
LINC01140-202ENST00000467438 TRGV4A0A0C4DH28 118 aa15.02□□□□□ -0.01
LINC01140-202ENST00000467438 DEFB121Q5J5C9 76 aa15□□□□□ -0.01
LINC01140-202ENST00000467438 MIR7-3HGQ8N6C7 128 aa15□□□□□ -0.01
LINC01140-202ENST00000467438 CSNK1G2-AS1Q8NCQ2 148 aa15□□□□□ -0.01
LINC01140-202ENST00000467438 C16orf74Q96GX8 76 aa15□□□□□ -0.01
LINC01140-202ENST00000467438 Q9HAA7 133 aa14.99□□□□□ -0.01
LINC01140-202ENST00000467438 NBEAL2Q6ZNJ1 2754 aa14.99□□□□□ -0.01
LINC01140-202ENST00000467438 COX7B2Q8TF08 81 aa14.99□□□□□ -0.01
LINC01140-202ENST00000467438 LINC00337Q8N6G1 96 aa14.98□□□□□ -0.01
LINC01140-202ENST00000467438 C22orf24Q9Y442 160 aa14.98□□□□□ -0.01
LINC01140-202ENST00000467438 FN1P02751 2386 aaKnown RBP14.98□□□□□ -0.01
LINC01140-202ENST00000467438 CCDC179H3BU77 68 aa14.98□□□□□ -0.01
LINC01140-202ENST00000467438 HERV-K104P63124 156 aa14.98□□□□□ -0.01
LINC01140-202ENST00000467438 IGKV2-28A0A075B6P5 120 aa14.97□□□□□ -0.01
LINC01140-202ENST00000467438 B5MCH6 92 aa14.97□□□□□ -0.01
LINC01140-202ENST00000467438 IGKV2D-28P01615 120 aa14.97□□□□□ -0.01
LINC01140-202ENST00000467438 FHL2Q14192 279 aa14.97□□□□□ -0.01
LINC01140-202ENST00000467438 C5orf38Q86SI9 138 aa14.97□□□□□ -0.01
LINC01140-202ENST00000467438 CHCHD5Q9BSY4 110 aa14.97□□□□□ -0.01
LINC01140-202ENST00000467438 TRBV6-4A0A1B0GX49 114 aa14.96□□□□□ -0.01
LINC01140-202ENST00000467438 SS18L2Q9UHA2 77 aa14.96□□□□□ -0.01
LINC01140-202ENST00000467438 PDZD2O15018 2839 aa14.96□□□□□ -0.02
LINC01140-202ENST00000467438 IGLV1-51P01701 117 aa14.96□□□□□ -0.02
LINC01140-202ENST00000467438 C11orf68Q9H3H3 251 aaKnown RBP14.96□□□□□ -0.02
LINC01140-202ENST00000467438 BAALC-AS2P0C853 105 aa14.95□□□□□ -0.02
LINC01140-202ENST00000467438 TRBV6-8A0A0A6YYG3 113 aa14.95□□□□□ -0.02
LINC01140-202ENST00000467438 DEFB130BP0DP73 79 aa14.95□□□□□ -0.02
LINC01140-202ENST00000467438 DEFB130AP0DP74 79 aa14.95□□□□□ -0.02
LINC01140-202ENST00000467438 SMCR5Q8TEV8 140 aa14.95□□□□□ -0.02
LINC01140-202ENST00000467438 LINC00158P58513 81 aa14.94□□□□□ -0.02
LINC01140-202ENST00000467438 SND1-IT1Q9HBX3 110 aa14.94□□□□□ -0.02
LINC01140-202ENST00000467438 PFN2P35080 140 aa14.93□□□□□ -0.02
LINC01140-202ENST00000467438 KRTAP1-1Q07627 177 aa14.93□□□□□ -0.02
LINC01140-202ENST00000467438 Q6Q795 121 aa14.93□□□□□ -0.02
LINC01140-202ENST00000467438 COPS9Q8WXC6 57 aa14.93□□□□□ -0.02
LINC01140-202ENST00000467438 OVOL2Q9BRP0 275 aa14.93□□□□□ -0.02
LINC01140-202ENST00000467438 GCN1Q92616 2671 aaKnown RBP14.93□□□□□ -0.02
LINC01140-202ENST00000467438 IGHV3OR16-9A0A0B4J2B5 98 aa14.92□□□□□ -0.02
LINC01140-202ENST00000467438 FAM240AA0A1B0GVK7 77 aa14.92□□□□□ -0.02
LINC01140-202ENST00000467438 CRPP02741 224 aa14.9□□□□□ -0.02
LINC01140-202ENST00000467438 ITPR2Q14571 2701 aa14.9□□□□□ -0.02
LINC01140-202ENST00000467438 A0A096LPF7 62 aa14.9□□□□□ -0.02
LINC01140-202ENST00000467438 TRACP01848 142 aa14.9□□□□□ -0.02
LINC01140-202ENST00000467438 CCL18P55774 89 aa14.9□□□□□ -0.02
LINC01140-202ENST00000467438 CLPSL2Q6UWE3 100 aa14.9□□□□□ -0.02
LINC01140-202ENST00000467438 A0A087WYN8 130 aa14.89□□□□□ -0.03
LINC01140-202ENST00000467438 C9orf129Q5T035 196 aaKnown RBP14.89□□□□□ -0.03
LINC01140-202ENST00000467438 SMIM11BQ8TCY0 68 aa14.89□□□□□ -0.03
LINC01140-202ENST00000467438 TRAV13-2A0A0B4J235 113 aa14.87□□□□□ -0.03
LINC01140-202ENST00000467438 ATP5G1P05496 136 aa14.87□□□□□ -0.03
LINC01140-202ENST00000467438 RPL28P46779 137 aaKnown RBP14.87□□□□□ -0.03
LINC01140-202ENST00000467438 VWFP04275 2813 aa14.86□□□□□ -0.03
LINC01140-202ENST00000467438 XCL1P47992 114 aa14.86□□□□□ -0.03
LINC01140-202ENST00000467438 A0A087WZ39 114 aa14.85□□□□□ -0.03
LINC01140-202ENST00000467438 LINC00959A0A1B0GUT2 108 aa14.85□□□□□ -0.03
LINC01140-202ENST00000467438 RNASE1P07998 156 aaKnown RBP14.85□□□□□ -0.03
LINC01140-202ENST00000467438 MRPL23Q16540 153 aaKnown RBP14.85□□□□□ -0.03
LINC01140-202ENST00000467438 CMC4P56277 68 aaPredicted RBP14.84□□□□□ -0.03
LINC01140-202ENST00000467438 C16orf95Q9H693 158 aa14.84□□□□□ -0.03
LINC01140-202ENST00000467438 GYPEP15421 78 aa14.83□□□□□ -0.03
LINC01140-202ENST00000467438 MALP21145 153 aa14.82□□□□□ -0.04
LINC01140-202ENST00000467438 KRTAP10-3P60369 221 aa14.82□□□□□ -0.04
LINC01140-202ENST00000467438 TRBV7-7A0A0K0K1E9 115 aa14.82□□□□□ -0.04
LINC01140-202ENST00000467438 PAX4O43316 350 aa14.82□□□□□ -0.04
LINC01140-202ENST00000467438 GAGE2AQ6NT46 116 aa14.82□□□□□ -0.04
LINC01140-202ENST00000467438 SMR3AQ99954 134 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms